RNA–Protein interactions for RNA: ENST00000574175.1

TRAP1-209, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-209ENST00000574175 PTPRKQ15262 1439 aa25.52■■□□□ 1.68
TRAP1-209ENST00000574175 FAM50AQ14320 339 aaKnown RBP25.51■■□□□ 1.67
TRAP1-209ENST00000574175 DUOX2Q9NRD8 1548 aa25.5■■□□□ 1.67
TRAP1-209ENST00000574175 WASHC2CQ9Y4E1 1318 aa25.49■■□□□ 1.67
TRAP1-209ENST00000574175 FAM135AQ9P2D6 1515 aa25.48■■□□□ 1.67
TRAP1-209ENST00000574175 RRP7BPQ9NSQ0 103 aa25.48■■□□□ 1.67
TRAP1-209ENST00000574175 CHIC2Q9UKJ5 165 aa25.48■■□□□ 1.67
TRAP1-209ENST00000574175 RNF17Q9BXT8 1623 aaKnown RBP25.48■■□□□ 1.67
TRAP1-209ENST00000574175 EIF2AK4Q9P2K8 1649 aaKnown RBP25.48■■□□□ 1.67
TRAP1-209ENST00000574175 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
TRAP1-209ENST00000574175 MYO3AQ8NEV4 1616 aa25.44■■□□□ 1.66
TRAP1-209ENST00000574175 ANKRD30AQ9BXX3 1397 aa25.43■■□□□ 1.66
TRAP1-209ENST00000574175 PZPP20742 1482 aa25.42■■□□□ 1.66
TRAP1-209ENST00000574175 ABCC3O15438 1527 aa25.42■■□□□ 1.66
TRAP1-209ENST00000574175 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
TRAP1-209ENST00000574175 ERBINQ96RT1 1412 aa25.41■■□□□ 1.66
TRAP1-209ENST00000574175 FBXO31Q5XUX0 539 aaPredicted RBP25.41■■□□□ 1.66
TRAP1-209ENST00000574175 STRCQ7RTU9 1775 aa25.4■■□□□ 1.66
TRAP1-209ENST00000574175 TNRQ92752 1358 aa25.39■■□□□ 1.65
TRAP1-209ENST00000574175 CEP170BQ9Y4F5 1589 aaPredicted RBP25.39■■□□□ 1.65
TRAP1-209ENST00000574175 ZNF142P52746 1687 aaPredicted RBP25.38■■□□□ 1.65
TRAP1-209ENST00000574175 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
TRAP1-209ENST00000574175 CAMSAP1Q5T5Y3 1602 aa25.37■■□□□ 1.65
TRAP1-209ENST00000574175 ZC3H13Q5T200 1668 aaKnown RBP25.36■■□□□ 1.65
TRAP1-209ENST00000574175 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
TRAP1-209ENST00000574175 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
TRAP1-209ENST00000574175 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
TRAP1-209ENST00000574175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.654e-6■□□□□ 11.2
TRAP1-209ENST00000574175 CEP152O94986 1710 aa25.34■■□□□ 1.65
TRAP1-209ENST00000574175 PRDM15P57071 1507 aaPredicted RBP25.33■■□□□ 1.65
TRAP1-209ENST00000574175 A2ML1A8K2U0 1454 aa25.33■■□□□ 1.65
TRAP1-209ENST00000574175 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
TRAP1-209ENST00000574175 KANK1Q14678 1352 aa25.29■■□□□ 1.64
TRAP1-209ENST00000574175 PTPRTO14522 1441 aa25.29■■□□□ 1.64
TRAP1-209ENST00000574175 DEPDC5O75140 1603 aa25.28■■□□□ 1.64
TRAP1-209ENST00000574175 ERVK-7P63135 1459 aa25.28■■□□□ 1.64
TRAP1-209ENST00000574175 PLA2R1Q13018 1463 aa25.27■■□□□ 1.64
TRAP1-209ENST00000574175 ITGAEP38570 1179 aa25.26■■□□□ 1.63
TRAP1-209ENST00000574175 NLRP1Q9C000 1473 aa25.25■■□□□ 1.63
TRAP1-209ENST00000574175 SPATA31D1Q6ZQQ2 1576 aa25.25■■□□□ 1.63
TRAP1-209ENST00000574175 ANKRD50Q9ULJ7 1429 aa25.24■■□□□ 1.63
TRAP1-209ENST00000574175 PKD2Q13563 968 aa25.21■■□□□ 1.63
TRAP1-209ENST00000574175 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
TRAP1-209ENST00000574175 CERKQ8TCT0 537 aa25.2■■□□□ 1.62
TRAP1-209ENST00000574175 FBXO41Q8TF61 875 aa25.2■■□□□ 1.62
TRAP1-209ENST00000574175 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.62
TRAP1-209ENST00000574175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
TRAP1-209ENST00000574175 VWDEQ8N2E2 1590 aa25.18■■□□□ 1.62
TRAP1-209ENST00000574175 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
TRAP1-209ENST00000574175 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
TRAP1-209ENST00000574175 LMTK2Q8IWU2 1503 aa25.17■■□□□ 1.62
TRAP1-209ENST00000574175 THEMISQ8N1K5 641 aaPredicted RBP25.16■■□□□ 1.62
TRAP1-209ENST00000574175 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
TRAP1-209ENST00000574175 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
TRAP1-209ENST00000574175 POLR1AO95602 1720 aaPredicted RBP25.11■■□□□ 1.61
TRAP1-209ENST00000574175 ANKLE2Q86XL3 938 aa25.1■■□□□ 1.61
TRAP1-209ENST00000574175 NEURL4Q96JN8 1562 aa25.1■■□□□ 1.61
TRAP1-209ENST00000574175 UNC13BO14795 1591 aa25.09■■□□□ 1.61
TRAP1-209ENST00000574175 ZNF335Q9H4Z2 1342 aaPredicted RBP25.08■■□□□ 1.6
TRAP1-209ENST00000574175 LTBP4Q8N2S1 1624 aa25.08■■□□□ 1.6
TRAP1-209ENST00000574175 UBR1Q8IWV7 1749 aa25.06■■□□□ 1.6
TRAP1-209ENST00000574175 SYNMO15061 1565 aa25.04■■□□□ 1.6
TRAP1-209ENST00000574175 TET3O43151 1660 aa25.04■■□□□ 1.6
TRAP1-209ENST00000574175 PIK3C2BO00750 1634 aa25.03■■□□□ 1.6
TRAP1-209ENST00000574175 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
TRAP1-209ENST00000574175 NOS1P29475 1434 aa25.03■■□□□ 1.6
TRAP1-209ENST00000574175 STAG3Q9UJ98 1225 aa25.02■■□□□ 1.6
TRAP1-209ENST00000574175 NUP155O75694 1391 aa25■■□□□ 1.59
TRAP1-209ENST00000574175 RPRD2Q5VT52 1461 aaKnown RBP25■■□□□ 1.59
TRAP1-209ENST00000574175 MED14O60244 1454 aa24.99■■□□□ 1.59
TRAP1-209ENST00000574175 IDI1Q13907 227 aa24.99■■□□□ 1.59
TRAP1-209ENST00000574175 GCC2Q8IWJ2 1684 aa24.98■■□□□ 1.59
TRAP1-209ENST00000574175 IQGAP3Q86VI3 1631 aa24.97■■□□□ 1.59
TRAP1-209ENST00000574175 SCAF11Q99590 1463 aaKnown RBP24.96■■□□□ 1.59
TRAP1-209ENST00000574175 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
TRAP1-209ENST00000574175 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
TRAP1-209ENST00000574175 SLIT1O75093 1534 aa24.96■■□□□ 1.59
TRAP1-209ENST00000574175 LTKP29376 864 aa24.94■■□□□ 1.58
TRAP1-209ENST00000574175 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
TRAP1-209ENST00000574175 ADGRB3O60242 1522 aa24.94■■□□□ 1.58
TRAP1-209ENST00000574175 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
TRAP1-209ENST00000574175 SLC52A1Q9NWF4 448 aa24.93■■□□□ 1.58
TRAP1-209ENST00000574175 IQSEC2Q5JU85 1478 aa24.93■■□□□ 1.58
TRAP1-209ENST00000574175 NAIPQ13075 1403 aa24.93■■□□□ 1.58
TRAP1-209ENST00000574175 E9PCH4 1651 aa24.92■■□□□ 1.58
TRAP1-209ENST00000574175 EID1Q9Y6B2 187 aa24.92■■□□□ 1.58
TRAP1-209ENST00000574175 KDM5AP29375 1690 aaKnown RBP24.89■■□□□ 1.58
TRAP1-209ENST00000574175 CPS1P31327 1500 aa24.86■■□□□ 1.57
TRAP1-209ENST00000574175 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
TRAP1-209ENST00000574175 CHGAP10645 457 aaKnown RBP24.85■■□□□ 1.57
TRAP1-209ENST00000574175 UBAP1LF5GYI3 381 aa24.82■■□□□ 1.56
TRAP1-209ENST00000574175 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
TRAP1-209ENST00000574175 MYO5BQ9ULV0 1848 aa24.79■■□□□ 1.56
TRAP1-209ENST00000574175 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
TRAP1-209ENST00000574175 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
TRAP1-209ENST00000574175 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
TRAP1-209ENST00000574175 ZFYVE9O95405 1425 aa24.77■■□□□ 1.56
TRAP1-209ENST00000574175 STRCP1A6NGW2 1772 aa24.76■■□□□ 1.55
TRAP1-209ENST00000574175 PPP1R15AO75807 674 aaPredicted RBP24.76■■□□□ 1.55
TRAP1-209ENST00000574175 BCANQ96GW7 911 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms