RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SHANK2Q9UPX8 1470 aa27.25■■□□□ 1.95
SMG6-212ENST00000573153 DNMT1P26358 1616 aaKnown RBP27.23■■□□□ 1.95
SMG6-212ENST00000573153 EIF2AK4Q9P2K8 1649 aaKnown RBP27.23■■□□□ 1.95
SMG6-212ENST00000573153 KIF3BO15066 747 aa27.22■■□□□ 1.95
SMG6-212ENST00000573153 TSPY4P0CV99 314 aa27.22■■□□□ 1.95
SMG6-212ENST00000573153 TSPY10P0CW01 314 aa27.22■■□□□ 1.95
SMG6-212ENST00000573153 NCOA1Q15788 1441 aa27.2■■□□□ 1.94
SMG6-212ENST00000573153 DAPK1P53355 1430 aa27.18■■□□□ 1.94
SMG6-212ENST00000573153 PZPP20742 1482 aa27.18■■□□□ 1.94
SMG6-212ENST00000573153 CEP170BQ9Y4F5 1589 aaPredicted RBP27.18■■□□□ 1.94
SMG6-212ENST00000573153 APLP2Q06481 763 aa27.16■■□□□ 1.94
SMG6-212ENST00000573153 DUOX2Q9NRD8 1548 aa27.16■■□□□ 1.94
SMG6-212ENST00000573153 ABCC3O15438 1527 aa27.15■■□□□ 1.94
SMG6-212ENST00000573153 CAMSAP1Q5T5Y3 1602 aa27.14■■□□□ 1.94
SMG6-212ENST00000573153 PTPRTO14522 1441 aa27.12■■□□□ 1.93
SMG6-212ENST00000573153 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
SMG6-212ENST00000573153 KIF15Q9NS87 1388 aa27.1■■□□□ 1.93
SMG6-212ENST00000573153 FBXO31Q5XUX0 539 aaPredicted RBP27.1■■□□□ 1.93
SMG6-212ENST00000573153 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
SMG6-212ENST00000573153 PLA2R1Q13018 1463 aa27.09■■□□□ 1.93
SMG6-212ENST00000573153 DEPDC5O75140 1603 aa27.08■■□□□ 1.93
SMG6-212ENST00000573153 ERBINQ96RT1 1412 aa27.07■■□□□ 1.92
SMG6-212ENST00000573153 A2ML1A8K2U0 1454 aa27.07■■□□□ 1.92
SMG6-212ENST00000573153 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
SMG6-212ENST00000573153 CEP152O94986 1710 aa27.05■■□□□ 1.92
SMG6-212ENST00000573153 WASHC2CQ9Y4E1 1318 aa27.05■■□□□ 1.92
SMG6-212ENST00000573153 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
SMG6-212ENST00000573153 FBXO41Q8TF61 875 aa27.04■■□□□ 1.92
SMG6-212ENST00000573153 TNRQ92752 1358 aa27.04■■□□□ 1.92
SMG6-212ENST00000573153 LTBP4Q8N2S1 1624 aa27.02■■□□□ 1.92
SMG6-212ENST00000573153 VWDEQ8N2E2 1590 aa27.01■■□□□ 1.91
SMG6-212ENST00000573153 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
SMG6-212ENST00000573153 DMRT2Q9Y5R5 561 aa27■■□□□ 1.91
SMG6-212ENST00000573153 ERVK-7P63135 1459 aa26.99■■□□□ 1.91
SMG6-212ENST00000573153 NEURL4Q96JN8 1562 aa26.97■■□□□ 1.91
SMG6-212ENST00000573153 CERKQ8TCT0 537 aa26.97■■□□□ 1.91
SMG6-212ENST00000573153 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
SMG6-212ENST00000573153 ANKRD30AQ9BXX3 1397 aa26.96■■□□□ 1.91
SMG6-212ENST00000573153 NLRP1Q9C000 1473 aa26.95■■□□□ 1.91
SMG6-212ENST00000573153 ARHGAP31Q2M1Z3 1444 aa26.95■■□□□ 1.9
SMG6-212ENST00000573153 CHIC2Q9UKJ5 165 aa26.94■■□□□ 1.9
SMG6-212ENST00000573153 LMTK2Q8IWU2 1503 aa26.94■■□□□ 1.9
SMG6-212ENST00000573153 PKD2Q13563 968 aa26.89■■□□□ 1.9
SMG6-212ENST00000573153 POLR1AO95602 1720 aaPredicted RBP26.89■■□□□ 1.9
SMG6-212ENST00000573153 UGGT1Q9NYU2 1555 aa26.88■■□□□ 1.89
SMG6-212ENST00000573153 FAM50AQ14320 339 aaKnown RBP26.86■■□□□ 1.89
SMG6-212ENST00000573153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.89
SMG6-212ENST00000573153 UBR1Q8IWV7 1749 aa26.84■■□□□ 1.89
SMG6-212ENST00000573153 ANKRD50Q9ULJ7 1429 aa26.82■■□□□ 1.88
SMG6-212ENST00000573153 EFCAB6Q5THR3 1501 aa26.82■■□□□ 1.88
SMG6-212ENST00000573153 ZNF335Q9H4Z2 1342 aaPredicted RBP26.82■■□□□ 1.88
SMG6-212ENST00000573153 MED14O60244 1454 aa26.81■■□□□ 1.88
SMG6-212ENST00000573153 CFAP65Q6ZU64 1925 aaKnown RBP26.8■■□□□ 1.88
SMG6-212ENST00000573153 SYNMO15061 1565 aa26.8■■□□□ 1.88
SMG6-212ENST00000573153 IQSEC2Q5JU85 1478 aa26.79■■□□□ 1.88
SMG6-212ENST00000573153 UNC13BO14795 1591 aa26.79■■□□□ 1.88
SMG6-212ENST00000573153 PPARGC1BQ86YN6 1023 aaKnown RBP26.78■■□□□ 1.88
SMG6-212ENST00000573153 ROCK1Q13464 1354 aa26.78■■□□□ 1.88
SMG6-212ENST00000573153 NOS1P29475 1434 aa26.77■■□□□ 1.88
SMG6-212ENST00000573153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.77■■□□□ 1.88
SMG6-212ENST00000573153 ARHGAP23Q9P227 1491 aa26.76■■□□□ 1.87
SMG6-212ENST00000573153 PIK3C2BO00750 1634 aa26.75■■□□□ 1.87
SMG6-212ENST00000573153 KANK1Q14678 1352 aa26.74■■□□□ 1.87
SMG6-212ENST00000573153 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
SMG6-212ENST00000573153 SLIT1O75093 1534 aa26.74■■□□□ 1.87
SMG6-212ENST00000573153 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
SMG6-212ENST00000573153 NPHP4O75161 1426 aaPredicted RBP26.72■■□□□ 1.87
SMG6-212ENST00000573153 TET3O43151 1660 aa26.7■■□□□ 1.87
SMG6-212ENST00000573153 IQGAP1P46940 1657 aa26.7■■□□□ 1.87
SMG6-212ENST00000573153 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.86
SMG6-212ENST00000573153 ANKLE2Q86XL3 938 aa26.69■■□□□ 1.86
SMG6-212ENST00000573153 RPRD2Q5VT52 1461 aaKnown RBP26.67■■□□□ 1.86
SMG6-212ENST00000573153 IQGAP3Q86VI3 1631 aa26.65■■□□□ 1.86
SMG6-212ENST00000573153 GCC2Q8IWJ2 1684 aa26.65■■□□□ 1.86
SMG6-212ENST00000573153 STRCP1A6NGW2 1772 aa26.65■■□□□ 1.86
SMG6-212ENST00000573153 SCAF11Q99590 1463 aaKnown RBP26.64■■□□□ 1.86
SMG6-212ENST00000573153 LTKP29376 864 aa26.63■■□□□ 1.85
SMG6-212ENST00000573153 IDI1Q13907 227 aa26.63■■□□□ 1.85
SMG6-212ENST00000573153 E9PCH4 1651 aa26.62■■□□□ 1.85
SMG6-212ENST00000573153 ADGRB3O60242 1522 aa26.61■■□□□ 1.85
SMG6-212ENST00000573153 CPS1P31327 1500 aa26.61■■□□□ 1.85
SMG6-212ENST00000573153 TMEM2Q9UHN6 1383 aa26.6■■□□□ 1.85
SMG6-212ENST00000573153 ALKQ9UM73 1620 aa26.56■■□□□ 1.84
SMG6-212ENST00000573153 ITGAEP38570 1179 aa26.55■■□□□ 1.84
SMG6-212ENST00000573153 TMEM131LA2VDJ0 1609 aa26.53■■□□□ 1.84
SMG6-212ENST00000573153 NAIPQ13075 1403 aa26.52■■□□□ 1.84
SMG6-212ENST00000573153 MYO5BQ9ULV0 1848 aa26.51■■□□□ 1.83
SMG6-212ENST00000573153 ZFYVE9O95405 1425 aa26.51■■□□□ 1.83
SMG6-212ENST00000573153 TXNDC2Q86VQ3 553 aa26.5■■□□□ 1.83
SMG6-212ENST00000573153 SLC52A1Q9NWF4 448 aa26.5■■□□□ 1.83
SMG6-212ENST00000573153 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
SMG6-212ENST00000573153 NUP155O75694 1391 aa26.47■■□□□ 1.83
SMG6-212ENST00000573153 XIRP1Q702N8 1843 aaKnown RBP26.43■■□□□ 1.82
SMG6-212ENST00000573153 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
SMG6-212ENST00000573153 UBAP1LF5GYI3 381 aa26.42■■□□□ 1.82
SMG6-212ENST00000573153 EID1Q9Y6B2 187 aa26.4■■□□□ 1.82
SMG6-212ENST00000573153 STAG3Q9UJ98 1225 aa26.39■■□□□ 1.82
SMG6-212ENST00000573153 NWD1Q149M9 1564 aa26.38■■□□□ 1.81
SMG6-212ENST00000573153 SPHKAPQ2M3C7 1700 aa26.38■■□□□ 1.81
SMG6-212ENST00000573153 RIMS2Q9UQ26 1411 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms