RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 DMRT2Q9Y5R5 561 aa26.17■■□□□ 1.78
RAB40B-205ENST00000571880 CFAP65Q6ZU64 1925 aaKnown RBP26.16■■□□□ 1.78
RAB40B-205ENST00000571880 DNMT1P26358 1616 aaKnown RBP26.15■■□□□ 1.78
RAB40B-205ENST00000571880 POLR1AO95602 1720 aaPredicted RBP26.15■■□□□ 1.78
RAB40B-205ENST00000571880 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.78
RAB40B-205ENST00000571880 EIF2AK4Q9P2K8 1649 aaKnown RBP26.14■■□□□ 1.78
RAB40B-205ENST00000571880 TSPY4P0CV99 314 aa26.14■■□□□ 1.78
RAB40B-205ENST00000571880 TSPY10P0CW01 314 aa26.14■■□□□ 1.78
RAB40B-205ENST00000571880 MIA2Q96PC5 1412 aa26.14■■□□□ 1.77
RAB40B-205ENST00000571880 RSPH4AQ5TD94 716 aa26.13■■□□□ 1.77
RAB40B-205ENST00000571880 PZPP20742 1482 aa26.12■■□□□ 1.77
RAB40B-205ENST00000571880 LTBP4Q8N2S1 1624 aa26.12■■□□□ 1.77
RAB40B-205ENST00000571880 MROH1Q8NDA8 1641 aa26.12■■□□□ 1.77
RAB40B-205ENST00000571880 FAM135AQ9P2D6 1515 aa26.12■■□□□ 1.77
RAB40B-205ENST00000571880 ZC3H13Q5T200 1668 aaKnown RBP26.12■■□□□ 1.77
RAB40B-205ENST00000571880 FBXO31Q5XUX0 539 aaPredicted RBP26.11■■□□□ 1.77
RAB40B-205ENST00000571880 A2ML1A8K2U0 1454 aa26.11■■□□□ 1.77
RAB40B-205ENST00000571880 APLP2Q06481 763 aa26.09■■□□□ 1.77
RAB40B-205ENST00000571880 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
RAB40B-205ENST00000571880 PLA2R1Q13018 1463 aa26.09■■□□□ 1.77
RAB40B-205ENST00000571880 WASHC2CQ9Y4E1 1318 aa26.09■■□□□ 1.77
RAB40B-205ENST00000571880 ABCC3O15438 1527 aa26.09■■□□□ 1.77
RAB40B-205ENST00000571880 TNRQ92752 1358 aa26.08■■□□□ 1.77
RAB40B-205ENST00000571880 TCOF1Q13428 1488 aaKnown RBP26.06■■□□□ 1.76
RAB40B-205ENST00000571880 DUOX2Q9NRD8 1548 aa26.04■■□□□ 1.76
RAB40B-205ENST00000571880 ABCC5O15440 1437 aa26.03■■□□□ 1.76
RAB40B-205ENST00000571880 FGD6Q6ZV73 1430 aa26.03■■□□□ 1.76
RAB40B-205ENST00000571880 NEURL4Q96JN8 1562 aa26.03■■□□□ 1.76
RAB40B-205ENST00000571880 SHANK2Q9UPX8 1470 aa26.02■■□□□ 1.76
RAB40B-205ENST00000571880 ZNF335Q9H4Z2 1342 aaPredicted RBP26.01■■□□□ 1.75
RAB40B-205ENST00000571880 DAPK1P53355 1430 aa26■■□□□ 1.75
RAB40B-205ENST00000571880 KIF15Q9NS87 1388 aa25.99■■□□□ 1.75
RAB40B-205ENST00000571880 SPATA31D1Q6ZQQ2 1576 aa25.97■■□□□ 1.75
RAB40B-205ENST00000571880 PRDM15P57071 1507 aaPredicted RBP25.97■■□□□ 1.75
RAB40B-205ENST00000571880 UGGT1Q9NYU2 1555 aa25.96■■□□□ 1.75
RAB40B-205ENST00000571880 PKD2Q13563 968 aa25.95■■□□□ 1.74
RAB40B-205ENST00000571880 ERVK-7P63135 1459 aa25.95■■□□□ 1.74
RAB40B-205ENST00000571880 DEPDC5O75140 1603 aa25.95■■□□□ 1.74
RAB40B-205ENST00000571880 RRP7BPQ9NSQ0 103 aa25.94■■□□□ 1.74
RAB40B-205ENST00000571880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.94■■□□□ 1.74
RAB40B-205ENST00000571880 NLRP1Q9C000 1473 aa25.93■■□□□ 1.74
RAB40B-205ENST00000571880 UBR1Q8IWV7 1749 aa25.91■■□□□ 1.74
RAB40B-205ENST00000571880 ERBINQ96RT1 1412 aa25.91■■□□□ 1.74
RAB40B-205ENST00000571880 CHIC2Q9UKJ5 165 aa25.91■■□□□ 1.74
RAB40B-205ENST00000571880 IQSEC2Q5JU85 1478 aa25.89■■□□□ 1.73
RAB40B-205ENST00000571880 IQGAP1P46940 1657 aa25.89■■□□□ 1.73
RAB40B-205ENST00000571880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.87■■□□□ 1.73
RAB40B-205ENST00000571880 FAM50AQ14320 339 aaKnown RBP25.83■■□□□ 1.73
RAB40B-205ENST00000571880 PIK3C2BO00750 1634 aa25.83■■□□□ 1.73
RAB40B-205ENST00000571880 STRCP1A6NGW2 1772 aa25.82■■□□□ 1.72
RAB40B-205ENST00000571880 VWDEQ8N2E2 1590 aa25.82■■□□□ 1.72
RAB40B-205ENST00000571880 ANKRD30AQ9BXX3 1397 aa25.82■■□□□ 1.72
RAB40B-205ENST00000571880 NPHP4O75161 1426 aaPredicted RBP25.81■■□□□ 1.72
RAB40B-205ENST00000571880 THEMISQ8N1K5 641 aaPredicted RBP25.79■■□□□ 1.72
RAB40B-205ENST00000571880 ANKLE2Q86XL3 938 aa25.78■■□□□ 1.72
RAB40B-205ENST00000571880 ADGRL2O95490 1459 aa25.77■■□□□ 1.72
RAB40B-205ENST00000571880 UBAP1LF5GYI3 381 aa25.76■■□□□ 1.71
RAB40B-205ENST00000571880 MED14O60244 1454 aa25.75■■□□□ 1.71
RAB40B-205ENST00000571880 KANK1Q14678 1352 aa25.75■■□□□ 1.71
RAB40B-205ENST00000571880 SYNMO15061 1565 aa25.74■■□□□ 1.71
RAB40B-205ENST00000571880 CPS1P31327 1500 aa25.74■■□□□ 1.71
RAB40B-205ENST00000571880 EFCAB6Q5THR3 1501 aa25.74■■□□□ 1.71
RAB40B-205ENST00000571880 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
RAB40B-205ENST00000571880 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
RAB40B-205ENST00000571880 MYO5BQ9ULV0 1848 aa25.72■■□□□ 1.71
RAB40B-205ENST00000571880 LMTK2Q8IWU2 1503 aa25.71■■□□□ 1.71
RAB40B-205ENST00000571880 SCAF11Q99590 1463 aaKnown RBP25.7■■□□□ 1.7
RAB40B-205ENST00000571880 DISP3Q9P2K9 1392 aa25.68■■□□□ 1.7
RAB40B-205ENST00000571880 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
RAB40B-205ENST00000571880 SLIT1O75093 1534 aa25.67■■□□□ 1.7
RAB40B-205ENST00000571880 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
RAB40B-205ENST00000571880 ANKRD50Q9ULJ7 1429 aa25.66■■□□□ 1.7
RAB40B-205ENST00000571880 TET3O43151 1660 aa25.66■■□□□ 1.7
RAB40B-205ENST00000571880 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
RAB40B-205ENST00000571880 UNC13BO14795 1591 aa25.65■■□□□ 1.7
RAB40B-205ENST00000571880 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.69
RAB40B-205ENST00000571880 XIRP1Q702N8 1843 aaKnown RBP25.63■■□□□ 1.69
RAB40B-205ENST00000571880 ADGRB3O60242 1522 aa25.63■■□□□ 1.69
RAB40B-205ENST00000571880 PIP4K2BP78356 416 aa25.62■■□□□ 1.69
RAB40B-205ENST00000571880 ALKQ9UM73 1620 aa25.62■■□□□ 1.69
RAB40B-205ENST00000571880 LTKP29376 864 aa25.61■■□□□ 1.69
RAB40B-205ENST00000571880 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
RAB40B-205ENST00000571880 E9PCH4 1651 aa25.59■■□□□ 1.69
RAB40B-205ENST00000571880 ITGAEP38570 1179 aa25.59■■□□□ 1.69
RAB40B-205ENST00000571880 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.69
RAB40B-205ENST00000571880 NOS1P29475 1434 aa25.58■■□□□ 1.69
RAB40B-205ENST00000571880 TXNDC2Q86VQ3 553 aa25.58■■□□□ 1.69
RAB40B-205ENST00000571880 TMEM2Q9UHN6 1383 aa25.56■■□□□ 1.68
RAB40B-205ENST00000571880 IDI1Q13907 227 aa25.55■■□□□ 1.68
RAB40B-205ENST00000571880 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
RAB40B-205ENST00000571880 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
RAB40B-205ENST00000571880 ILDR2Q71H61 639 aa25.51■■□□□ 1.67
RAB40B-205ENST00000571880 EID1Q9Y6B2 187 aa25.51■■□□□ 1.67
RAB40B-205ENST00000571880 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
RAB40B-205ENST00000571880 TOM1O60784 492 aa25.49■■□□□ 1.67
RAB40B-205ENST00000571880 HSPA1LP34931 641 aa25.49■■□□□ 1.67
RAB40B-205ENST00000571880 TMEM131LA2VDJ0 1609 aa25.48■■□□□ 1.67
RAB40B-205ENST00000571880 ROCK1Q13464 1354 aa25.47■■□□□ 1.67
RAB40B-205ENST00000571880 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
RAB40B-205ENST00000571880 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms