RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ADGRL2O95490 1459 aa22.08■■□□□ 1.13
LITAF-209ENST00000571688 DAXXQ9UER7 740 aaPredicted RBP22.08■■□□□ 1.13
LITAF-209ENST00000571688 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
LITAF-209ENST00000571688 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
LITAF-209ENST00000571688 FAM43AQ8N2R8 423 aa22.06■■□□□ 1.12
LITAF-209ENST00000571688 CAMSAP2Q08AD1 1489 aa22.06■■□□□ 1.12
LITAF-209ENST00000571688 PLEKHH2Q8IVE3 1493 aa22.06■■□□□ 1.12
LITAF-209ENST00000571688 EIF5BO60841 1220 aaKnown RBP22.05■■□□□ 1.12
LITAF-209ENST00000571688 KIAA0586Q9BVV6 1533 aa22.04■■□□□ 1.12
LITAF-209ENST00000571688 FAM161AQ3B820 660 aa22.04■■□□□ 1.12
LITAF-209ENST00000571688 C8orf34Q49A92 452 aa22.04■■□□□ 1.12
LITAF-209ENST00000571688 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
LITAF-209ENST00000571688 CENPQQ7L2Z9 268 aaPredicted RBP22.03■■□□□ 1.12
LITAF-209ENST00000571688 FRAT2O75474 233 aaPredicted RBP22.02■■□□□ 1.12
LITAF-209ENST00000571688 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
LITAF-209ENST00000571688 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
LITAF-209ENST00000571688 PBRM1Q86U86 1689 aa21.99■■□□□ 1.11
LITAF-209ENST00000571688 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
LITAF-209ENST00000571688 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
LITAF-209ENST00000571688 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
LITAF-209ENST00000571688 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
LITAF-209ENST00000571688 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
LITAF-209ENST00000571688 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
LITAF-209ENST00000571688 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
LITAF-209ENST00000571688 ANKRD30AQ9BXX3 1397 aa21.95■■□□□ 1.1
LITAF-209ENST00000571688 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
LITAF-209ENST00000571688 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
LITAF-209ENST00000571688 KDM5DQ9BY66 1539 aa21.94■■□□□ 1.1
LITAF-209ENST00000571688 RAPGEF6Q8TEU7 1601 aa21.94■■□□□ 1.1
LITAF-209ENST00000571688 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
LITAF-209ENST00000571688 KDM2AQ9Y2K7 1162 aa21.92■■□□□ 1.1
LITAF-209ENST00000571688 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
LITAF-209ENST00000571688 GPATCH8Q9UKJ3 1502 aaKnown RBP21.91■■□□□ 1.1
LITAF-209ENST00000571688 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
LITAF-209ENST00000571688 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
LITAF-209ENST00000571688 COL17A1Q9UMD9 1497 aaPredicted RBP21.9■■□□□ 1.1
LITAF-209ENST00000571688 NUP155O75694 1391 aa21.89■■□□□ 1.09
LITAF-209ENST00000571688 ADCY10Q96PN6 1610 aa21.88■■□□□ 1.09
LITAF-209ENST00000571688 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
LITAF-209ENST00000571688 DISP1Q96F81 1524 aa21.87■■□□□ 1.09
LITAF-209ENST00000571688 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
LITAF-209ENST00000571688 CC2D1BQ5T0F9 858 aaKnown RBP21.85■■□□□ 1.09
LITAF-209ENST00000571688 PRAG1Q86YV5 1406 aa21.85■■□□□ 1.09
LITAF-209ENST00000571688 LAMC1P11047 1609 aa21.84■■□□□ 1.09
LITAF-209ENST00000571688 PTPRGP23470 1445 aa21.84■■□□□ 1.09
LITAF-209ENST00000571688 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.09
LITAF-209ENST00000571688 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
LITAF-209ENST00000571688 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
LITAF-209ENST00000571688 PLEKHH1Q9ULM0 1364 aa21.82■■□□□ 1.08
LITAF-209ENST00000571688 CDC42BPAQ5VT25 1732 aa21.82■■□□□ 1.08
LITAF-209ENST00000571688 RGS3P49796 1198 aa21.82■■□□□ 1.08
LITAF-209ENST00000571688 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.82■■□□□ 1.08
LITAF-209ENST00000571688 USP19O94966 1318 aa21.81■■□□□ 1.08
LITAF-209ENST00000571688 POGKQ9P215 609 aa21.81■■□□□ 1.08
LITAF-209ENST00000571688 ZNF521Q96K83 1311 aa21.81■■□□□ 1.08
LITAF-209ENST00000571688 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
LITAF-209ENST00000571688 PRDM15P57071 1507 aaPredicted RBP21.8■■□□□ 1.08
LITAF-209ENST00000571688 ADAMTS8Q9UP79 889 aa21.8■■□□□ 1.08
LITAF-209ENST00000571688 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
LITAF-209ENST00000571688 ZNF777Q9ULD5 760 aaPredicted RBP21.79■■□□□ 1.08
LITAF-209ENST00000571688 RRAGDQ9NQL2 400 aaPredicted RBP21.79■■□□□ 1.08
LITAF-209ENST00000571688 EIF3AQ14152 1382 aaKnown RBP21.78■■□□□ 1.08
LITAF-209ENST00000571688 PANK3Q9H999 370 aa21.78■■□□□ 1.08
LITAF-209ENST00000571688 TESK2Q96S53 571 aa21.77■■□□□ 1.08
LITAF-209ENST00000571688 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
LITAF-209ENST00000571688 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
LITAF-209ENST00000571688 L1TD1Q5T7N2 865 aaKnown RBP21.76■■□□□ 1.07
LITAF-209ENST00000571688 GOLGA2Q08379 1002 aa21.75■■□□□ 1.07
LITAF-209ENST00000571688 NBPF1Q3BBV0 1214 aa21.75■■□□□ 1.07
LITAF-209ENST00000571688 ERBINQ96RT1 1412 aa21.74■■□□□ 1.07
LITAF-209ENST00000571688 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
LITAF-209ENST00000571688 SLFN5Q08AF3 891 aa21.71■■□□□ 1.07
LITAF-209ENST00000571688 BECN1Q14457 450 aa21.71■■□□□ 1.07
LITAF-209ENST00000571688 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
LITAF-209ENST00000571688 TRMT2AQ8IZ69 625 aaKnown RBP21.7■■□□□ 1.06
LITAF-209ENST00000571688 FAM135AQ9P2D6 1515 aa21.69■■□□□ 1.06
LITAF-209ENST00000571688 A2MP01023 1474 aa21.69■■□□□ 1.06
LITAF-209ENST00000571688 WDR43Q15061 677 aaKnown RBP eCLIP21.68■■□□□ 1.06
LITAF-209ENST00000571688 ANTXR1Q9H6X2 564 aa21.68■■□□□ 1.06
LITAF-209ENST00000571688 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
LITAF-209ENST00000571688 EIF2AK4Q9P2K8 1649 aaKnown RBP21.68■■□□□ 1.06
LITAF-209ENST00000571688 TMF1P82094 1093 aa21.67■■□□□ 1.06
LITAF-209ENST00000571688 MYO5CQ9NQX4 1742 aa21.67■■□□□ 1.06
LITAF-209ENST00000571688 SEC24BO95487 1268 aa21.66■■□□□ 1.06
LITAF-209ENST00000571688 PPP2R1AP30153 589 aa21.66■■□□□ 1.06
LITAF-209ENST00000571688 NKTRP30414 1462 aaKnown RBP21.66■■□□□ 1.06
LITAF-209ENST00000571688 IGHDP01880 384 aa21.66■■□□□ 1.06
LITAF-209ENST00000571688 MAPK8IP3Q9UPT6 1336 aa21.65■■□□□ 1.06
LITAF-209ENST00000571688 SLKQ9H2G2 1235 aaPredicted RBP21.65■■□□□ 1.06
LITAF-209ENST00000571688 MAGI2Q86UL8 1455 aa21.64■■□□□ 1.06
LITAF-209ENST00000571688 PLB1Q6P1J6 1458 aa21.64■■□□□ 1.05
LITAF-209ENST00000571688 WDR7Q9Y4E6 1490 aa21.63■■□□□ 1.05
LITAF-209ENST00000571688 ARHGEF5Q12774 1597 aa21.62■■□□□ 1.05
LITAF-209ENST00000571688 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
LITAF-209ENST00000571688 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
LITAF-209ENST00000571688 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
LITAF-209ENST00000571688 GLIPR1L2Q4G1C9 344 aa21.61■■□□□ 1.05
LITAF-209ENST00000571688 PKNOX2Q96KN3 472 aa21.61■■□□□ 1.05
LITAF-209ENST00000571688 NUP160Q12769 1436 aa21.61■■□□□ 1.05
LITAF-209ENST00000571688 PLA2R1Q13018 1463 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms