RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 DHX29Q7Z478 1369 aaKnown RBP21.49■■□□□ 1.03
RPAIN-209ENST00000571558 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
RPAIN-209ENST00000571558 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
RPAIN-209ENST00000571558 TNRQ92752 1358 aa21.46■■□□□ 1.03
RPAIN-209ENST00000571558 MBD5Q9P267 1494 aa21.46■■□□□ 1.03
RPAIN-209ENST00000571558 ANKLE2Q86XL3 938 aa21.46■■□□□ 1.03
RPAIN-209ENST00000571558 THEMISQ8N1K5 641 aaPredicted RBP21.46■■□□□ 1.03
RPAIN-209ENST00000571558 PIP4K2BP78356 416 aa21.45■■□□□ 1.02
RPAIN-209ENST00000571558 MED1Q15648 1581 aaPredicted RBP21.45■■□□□ 1.02
RPAIN-209ENST00000571558 PZPP20742 1482 aa21.44■■□□□ 1.02
RPAIN-209ENST00000571558 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
RPAIN-209ENST00000571558 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
RPAIN-209ENST00000571558 NEURL4Q96JN8 1562 aa21.43■■□□□ 1.02
RPAIN-209ENST00000571558 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
RPAIN-209ENST00000571558 ZNF644Q9H582 1327 aaPredicted RBP21.41■■□□□ 1.02
RPAIN-209ENST00000571558 FBXO31Q5XUX0 539 aaPredicted RBP21.41■■□□□ 1.02
RPAIN-209ENST00000571558 KIF3BO15066 747 aa21.4■■□□□ 1.02
RPAIN-209ENST00000571558 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
RPAIN-209ENST00000571558 MED14O60244 1454 aa21.4■■□□□ 1.02
RPAIN-209ENST00000571558 NLRP1Q9C000 1473 aa21.4■■□□□ 1.02
RPAIN-209ENST00000571558 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
RPAIN-209ENST00000571558 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
RPAIN-209ENST00000571558 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
RPAIN-209ENST00000571558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
RPAIN-209ENST00000571558 DEPDC5O75140 1603 aa21.36■■□□□ 1.01
RPAIN-209ENST00000571558 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
RPAIN-209ENST00000571558 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
RPAIN-209ENST00000571558 EHBP1L1Q8N3D4 1523 aa21.36■■□□□ 1.01
RPAIN-209ENST00000571558 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
RPAIN-209ENST00000571558 CCDC141Q6ZP82 1450 aa21.35■■□□□ 1.01
RPAIN-209ENST00000571558 UGGT1Q9NYU2 1555 aa21.35■■□□□ 1.01
RPAIN-209ENST00000571558 APLP2Q06481 763 aa21.31■■□□□ 1
RPAIN-209ENST00000571558 KANK4Q5T7N3 995 aaPredicted RBP21.29■■□□□ 1
RPAIN-209ENST00000571558 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
RPAIN-209ENST00000571558 TSPY4P0CV99 314 aa21.29■■□□□ 1
RPAIN-209ENST00000571558 TSPY10P0CW01 314 aa21.29■■□□□ 1
RPAIN-209ENST00000571558 ALKQ9UM73 1620 aa21.28■■□□□ 1
RPAIN-209ENST00000571558 IQGAP1P46940 1657 aa21.26■□□□□ 0.99
RPAIN-209ENST00000571558 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
RPAIN-209ENST00000571558 LRRC7Q96NW7 1537 aa21.24■□□□□ 0.99
RPAIN-209ENST00000571558 SYNMO15061 1565 aa21.23■□□□□ 0.99
RPAIN-209ENST00000571558 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
RPAIN-209ENST00000571558 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
RPAIN-209ENST00000571558 RNF17Q9BXT8 1623 aaKnown RBP21.22■□□□□ 0.99
RPAIN-209ENST00000571558 NCOA2Q15596 1464 aa21.21■□□□□ 0.99
RPAIN-209ENST00000571558 ZC3H13Q5T200 1668 aaKnown RBP21.19■□□□□ 0.98
RPAIN-209ENST00000571558 ABCC3O15438 1527 aa21.18■□□□□ 0.98
RPAIN-209ENST00000571558 ERVK-7P63135 1459 aa21.17■□□□□ 0.98
RPAIN-209ENST00000571558 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
RPAIN-209ENST00000571558 SCAF11Q99590 1463 aaKnown RBP21.15■□□□□ 0.98
RPAIN-209ENST00000571558 EIF2AK4Q9P2K8 1649 aaKnown RBP21.14■□□□□ 0.97
RPAIN-209ENST00000571558 MAST1Q9Y2H9 1570 aa21.13■□□□□ 0.97
RPAIN-209ENST00000571558 ARHGAP23Q9P227 1491 aa21.11■□□□□ 0.97
RPAIN-209ENST00000571558 SLIT1O75093 1534 aa21.1■□□□□ 0.97
RPAIN-209ENST00000571558 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
RPAIN-209ENST00000571558 RGS17Q9UGC6 210 aaPredicted RBP21.1■□□□□ 0.97
RPAIN-209ENST00000571558 EID1Q9Y6B2 187 aa21.1■□□□□ 0.97
RPAIN-209ENST00000571558 FAM135BQ49AJ0 1406 aa21.09■□□□□ 0.97
RPAIN-209ENST00000571558 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
RPAIN-209ENST00000571558 ARHGAP31Q2M1Z3 1444 aa21.09■□□□□ 0.97
RPAIN-209ENST00000571558 LTKP29376 864 aa21.08■□□□□ 0.97
RPAIN-209ENST00000571558 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
RPAIN-209ENST00000571558 MROH1Q8NDA8 1641 aa21.05■□□□□ 0.96
RPAIN-209ENST00000571558 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
RPAIN-209ENST00000571558 MYOM3Q5VTT5 1437 aa21.01■□□□□ 0.95
RPAIN-209ENST00000571558 TMEM2Q9UHN6 1383 aa21.01■□□□□ 0.95
RPAIN-209ENST00000571558 CEP152O94986 1710 aa20.98■□□□□ 0.95
RPAIN-209ENST00000571558 PRDM15P57071 1507 aaPredicted RBP20.98■□□□□ 0.95
RPAIN-209ENST00000571558 KCNA6P17658 529 aa20.98■□□□□ 0.95
RPAIN-209ENST00000571558 XIRP1Q702N8 1843 aaKnown RBP20.98■□□□□ 0.95
RPAIN-209ENST00000571558 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
RPAIN-209ENST00000571558 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
RPAIN-209ENST00000571558 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
RPAIN-209ENST00000571558 KDM5AP29375 1690 aaKnown RBP20.96■□□□□ 0.95
RPAIN-209ENST00000571558 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
RPAIN-209ENST00000571558 POTEAQ6S8J7 498 aa20.95■□□□□ 0.95
RPAIN-209ENST00000571558 FGD6Q6ZV73 1430 aa20.95■□□□□ 0.94
RPAIN-209ENST00000571558 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
RPAIN-209ENST00000571558 KANK1Q14678 1352 aa20.94■□□□□ 0.94
RPAIN-209ENST00000571558 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
RPAIN-209ENST00000571558 EFCAB6Q5THR3 1501 aa20.92■□□□□ 0.94
RPAIN-209ENST00000571558 PIK3C2BO00750 1634 aa20.92■□□□□ 0.94
RPAIN-209ENST00000571558 PROSER2Q86WR7 435 aaPredicted RBP20.92■□□□□ 0.94
RPAIN-209ENST00000571558 TET3O43151 1660 aa20.9■□□□□ 0.94
RPAIN-209ENST00000571558 IDI1Q13907 227 aa20.9■□□□□ 0.94
RPAIN-209ENST00000571558 NKTRP30414 1462 aaKnown RBP20.9■□□□□ 0.94
RPAIN-209ENST00000571558 ROBO1Q9Y6N7 1651 aa20.89■□□□□ 0.93
RPAIN-209ENST00000571558 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
RPAIN-209ENST00000571558 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
RPAIN-209ENST00000571558 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
RPAIN-209ENST00000571558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.87■□□□□ 0.932e-6■□□□□ 10.3
RPAIN-209ENST00000571558 RRP7BPQ9NSQ0 103 aa20.87■□□□□ 0.93
RPAIN-209ENST00000571558 MSH6P52701 1360 aa20.87■□□□□ 0.93
RPAIN-209ENST00000571558 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
RPAIN-209ENST00000571558 JCADQ9P266 1359 aa20.86■□□□□ 0.93
RPAIN-209ENST00000571558 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
RPAIN-209ENST00000571558 SLAIN2Q9P270 581 aa20.86■□□□□ 0.93
RPAIN-209ENST00000571558 ABCC5O15440 1437 aa20.85■□□□□ 0.93
RPAIN-209ENST00000571558 NWD1Q149M9 1564 aa20.84■□□□□ 0.93
RPAIN-209ENST00000571558 NOS1P29475 1434 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms