RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 RNF17Q9BXT8 1623 aaKnown RBP21.34■■□□□ 1.01
PRPF8-202ENST00000571346 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
PRPF8-202ENST00000571346 EIF2AK4Q9P2K8 1649 aaKnown RBP21.33■■□□□ 1.01
PRPF8-202ENST00000571346 FGD6Q6ZV73 1430 aa21.33■■□□□ 1.01
PRPF8-202ENST00000571346 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
PRPF8-202ENST00000571346 NCOA1Q15788 1441 aa21.32■■□□□ 1
PRPF8-202ENST00000571346 DNMT1P26358 1616 aaKnown RBP21.31■■□□□ 1
PRPF8-202ENST00000571346 FBXO41Q8TF61 875 aa21.3■■□□□ 1
PRPF8-202ENST00000571346 PZPP20742 1482 aa21.3■■□□□ 1
PRPF8-202ENST00000571346 ZC3H13Q5T200 1668 aaKnown RBP21.3■■□□□ 1
PRPF8-202ENST00000571346 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
PRPF8-202ENST00000571346 DUOX2Q9NRD8 1548 aa21.29■■□□□ 1
PRPF8-202ENST00000571346 WASHC2CQ9Y4E1 1318 aa21.29■■□□□ 1
PRPF8-202ENST00000571346 TCOF1Q13428 1488 aaKnown RBP21.28■■□□□ 1
PRPF8-202ENST00000571346 ABCC5O15440 1437 aa21.28■■□□□ 1
PRPF8-202ENST00000571346 DAPK1P53355 1430 aa21.28■■□□□ 1
PRPF8-202ENST00000571346 KIF15Q9NS87 1388 aa21.27■■□□□ 1
PRPF8-202ENST00000571346 ABCC3O15438 1527 aa21.26■□□□□ 0.99
PRPF8-202ENST00000571346 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
PRPF8-202ENST00000571346 TNRQ92752 1358 aa21.25■□□□□ 0.99
PRPF8-202ENST00000571346 PTPRTO14522 1441 aa21.25■□□□□ 0.99
PRPF8-202ENST00000571346 CEP152O94986 1710 aa21.25■□□□□ 0.99
PRPF8-202ENST00000571346 A2ML1A8K2U0 1454 aa21.24■□□□□ 0.99
PRPF8-202ENST00000571346 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
PRPF8-202ENST00000571346 CERKQ8TCT0 537 aa21.22■□□□□ 0.99
PRPF8-202ENST00000571346 ERBINQ96RT1 1412 aa21.21■□□□□ 0.99
PRPF8-202ENST00000571346 FBXO31Q5XUX0 539 aaPredicted RBP21.21■□□□□ 0.99
PRPF8-202ENST00000571346 PRDM15P57071 1507 aaPredicted RBP21.2■□□□□ 0.98
PRPF8-202ENST00000571346 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
PRPF8-202ENST00000571346 NCKAP5LQ9HCH0 1330 aa21.19■□□□□ 0.98
PRPF8-202ENST00000571346 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
PRPF8-202ENST00000571346 DEPDC5O75140 1603 aa21.16■□□□□ 0.98
PRPF8-202ENST00000571346 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
PRPF8-202ENST00000571346 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
PRPF8-202ENST00000571346 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
PRPF8-202ENST00000571346 SPATA31D1Q6ZQQ2 1576 aa21.15■□□□□ 0.98
PRPF8-202ENST00000571346 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
PRPF8-202ENST00000571346 ERVK-7P63135 1459 aa21.14■□□□□ 0.98
PRPF8-202ENST00000571346 PKD2Q13563 968 aa21.13■□□□□ 0.97
PRPF8-202ENST00000571346 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
PRPF8-202ENST00000571346 LTBP4Q8N2S1 1624 aa21.12■□□□□ 0.97
PRPF8-202ENST00000571346 ADGRL2O95490 1459 aa21.11■□□□□ 0.97
PRPF8-202ENST00000571346 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
PRPF8-202ENST00000571346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.971e-7■■□□□ 13.2
PRPF8-202ENST00000571346 CFAP65Q6ZU64 1925 aaKnown RBP21.09■□□□□ 0.97
PRPF8-202ENST00000571346 KANK1Q14678 1352 aa21.09■□□□□ 0.97
PRPF8-202ENST00000571346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.08■□□□□ 0.965e-6■■■■■ 46.2
PRPF8-202ENST00000571346 ZNF335Q9H4Z2 1342 aaPredicted RBP21.06■□□□□ 0.96
PRPF8-202ENST00000571346 UBR1Q8IWV7 1749 aa21.04■□□□□ 0.96
PRPF8-202ENST00000571346 ARHGAP31Q2M1Z3 1444 aa21.04■□□□□ 0.96
PRPF8-202ENST00000571346 PPARGC1BQ86YN6 1023 aaKnown RBP21.03■□□□□ 0.96
PRPF8-202ENST00000571346 THEMISQ8N1K5 641 aaPredicted RBP21.03■□□□□ 0.96
PRPF8-202ENST00000571346 VWDEQ8N2E2 1590 aa21.02■□□□□ 0.96
PRPF8-202ENST00000571346 EFCAB6Q5THR3 1501 aa21.02■□□□□ 0.96
PRPF8-202ENST00000571346 LMTK2Q8IWU2 1503 aa21.02■□□□□ 0.96
PRPF8-202ENST00000571346 ANKRD50Q9ULJ7 1429 aa21.02■□□□□ 0.96
PRPF8-202ENST00000571346 IQSEC2Q5JU85 1478 aa21.01■□□□□ 0.95
PRPF8-202ENST00000571346 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
PRPF8-202ENST00000571346 ANKLE2Q86XL3 938 aa21■□□□□ 0.95
PRPF8-202ENST00000571346 PIK3C2BO00750 1634 aa20.99■□□□□ 0.95
PRPF8-202ENST00000571346 NPHP4O75161 1426 aaPredicted RBP20.98■□□□□ 0.95
PRPF8-202ENST00000571346 MED14O60244 1454 aa20.95■□□□□ 0.94
PRPF8-202ENST00000571346 UNC13BO14795 1591 aa20.95■□□□□ 0.94
PRPF8-202ENST00000571346 SYNMO15061 1565 aa20.95■□□□□ 0.94
PRPF8-202ENST00000571346 ITGAEP38570 1179 aa20.95■□□□□ 0.94
PRPF8-202ENST00000571346 TET3O43151 1660 aa20.93■□□□□ 0.94
PRPF8-202ENST00000571346 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
PRPF8-202ENST00000571346 CPS1P31327 1500 aa20.93■□□□□ 0.94
PRPF8-202ENST00000571346 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
PRPF8-202ENST00000571346 SLIT1O75093 1534 aa20.91■□□□□ 0.94
PRPF8-202ENST00000571346 GCC2Q8IWJ2 1684 aa20.91■□□□□ 0.94
PRPF8-202ENST00000571346 STAG3Q9UJ98 1225 aa20.9■□□□□ 0.94
PRPF8-202ENST00000571346 KDM5AP29375 1690 aaKnown RBP20.89■□□□□ 0.94
PRPF8-202ENST00000571346 ADGRB3O60242 1522 aa20.89■□□□□ 0.94
PRPF8-202ENST00000571346 ARHGAP23Q9P227 1491 aa20.89■□□□□ 0.94
PRPF8-202ENST00000571346 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
PRPF8-202ENST00000571346 NOS1P29475 1434 aa20.88■□□□□ 0.93
PRPF8-202ENST00000571346 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
PRPF8-202ENST00000571346 IQGAP3Q86VI3 1631 aa20.86■□□□□ 0.93
PRPF8-202ENST00000571346 TMEM2Q9UHN6 1383 aa20.85■□□□□ 0.93
PRPF8-202ENST00000571346 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
PRPF8-202ENST00000571346 E9PCH4 1651 aa20.83■□□□□ 0.93
PRPF8-202ENST00000571346 TXNDC2Q86VQ3 553 aa20.83■□□□□ 0.93
PRPF8-202ENST00000571346 EID1Q9Y6B2 187 aa20.83■□□□□ 0.93
PRPF8-202ENST00000571346 RRBP1Q9P2E9 1410 aaKnown RBP20.82■□□□□ 0.92
PRPF8-202ENST00000571346 LTKP29376 864 aa20.82■□□□□ 0.92
PRPF8-202ENST00000571346 IDI1Q13907 227 aa20.82■□□□□ 0.92
PRPF8-202ENST00000571346 MYO5BQ9ULV0 1848 aa20.8■□□□□ 0.92
PRPF8-202ENST00000571346 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
PRPF8-202ENST00000571346 NUP155O75694 1391 aa20.78■□□□□ 0.92
PRPF8-202ENST00000571346 SLC52A1Q9NWF4 448 aa20.78■□□□□ 0.92
PRPF8-202ENST00000571346 LRRC7Q96NW7 1537 aa20.76■□□□□ 0.91
PRPF8-202ENST00000571346 TMEM131LA2VDJ0 1609 aa20.75■□□□□ 0.91
PRPF8-202ENST00000571346 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
PRPF8-202ENST00000571346 SPHKAPQ2M3C7 1700 aa20.71■□□□□ 0.91
PRPF8-202ENST00000571346 TOM1O60784 492 aa20.71■□□□□ 0.91
PRPF8-202ENST00000571346 CHGAP10645 457 aaKnown RBP20.71■□□□□ 0.91
PRPF8-202ENST00000571346 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
PRPF8-202ENST00000571346 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
PRPF8-202ENST00000571346 BCANQ96GW7 911 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms