RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 CCDC141Q6ZP82 1450 aa19.68■□□□□ 0.74
ITGA3-216ENST00000570989 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
ITGA3-216ENST00000570989 ANKRD50Q9ULJ7 1429 aa19.67■□□□□ 0.74
ITGA3-216ENST00000570989 HNRNPMP52272 730 aaKnown RBP eCLIP19.67■□□□□ 0.74
ITGA3-216ENST00000570989 PZPP20742 1482 aa19.66■□□□□ 0.74
ITGA3-216ENST00000570989 DIP2BQ9P265 1576 aa19.66■□□□□ 0.74
ITGA3-216ENST00000570989 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
ITGA3-216ENST00000570989 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
ITGA3-216ENST00000570989 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
ITGA3-216ENST00000570989 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
ITGA3-216ENST00000570989 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
ITGA3-216ENST00000570989 NUDCQ9Y266 331 aa19.63■□□□□ 0.73
ITGA3-216ENST00000570989 TSPOAP1O95153 1857 aa19.63■□□□□ 0.73
ITGA3-216ENST00000570989 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
ITGA3-216ENST00000570989 IPO9Q96P70 1041 aaKnown RBP19.61■□□□□ 0.73
ITGA3-216ENST00000570989 RSPH4AQ5TD94 716 aa19.6■□□□□ 0.73
ITGA3-216ENST00000570989 BCORL1Q5H9F3 1711 aa19.6■□□□□ 0.73
ITGA3-216ENST00000570989 PLEKHH2Q8IVE3 1493 aa19.6■□□□□ 0.73
ITGA3-216ENST00000570989 PLCH2O75038 1416 aa19.59■□□□□ 0.73
ITGA3-216ENST00000570989 MAST1Q9Y2H9 1570 aa19.59■□□□□ 0.73
ITGA3-216ENST00000570989 CCDC136Q96JN2 1154 aa19.59■□□□□ 0.73
ITGA3-216ENST00000570989 KIAA1107Q9UPP5 1409 aa19.59■□□□□ 0.73
ITGA3-216ENST00000570989 FAM69CQ0P6D2 419 aa19.59■□□□□ 0.73
ITGA3-216ENST00000570989 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.72
ITGA3-216ENST00000570989 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
ITGA3-216ENST00000570989 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
ITGA3-216ENST00000570989 ARHGEF12Q9NZN5 1544 aa19.55■□□□□ 0.72
ITGA3-216ENST00000570989 ABCC1P33527 1531 aa19.54■□□□□ 0.72
ITGA3-216ENST00000570989 PPRC1Q5VV67 1664 aaKnown RBP19.53■□□□□ 0.72
ITGA3-216ENST00000570989 PLXNC1O60486 1568 aa19.53■□□□□ 0.72
ITGA3-216ENST00000570989 ARAP3Q8WWN8 1544 aa19.53■□□□□ 0.72
ITGA3-216ENST00000570989 NUP155O75694 1391 aa19.52■□□□□ 0.72
ITGA3-216ENST00000570989 EFCAB2Q5VUJ9 269 aa19.51■□□□□ 0.71
ITGA3-216ENST00000570989 GLI2P10070 1586 aa19.51■□□□□ 0.71
ITGA3-216ENST00000570989 MAP3K4Q9Y6R4 1608 aa19.5■□□□□ 0.71
ITGA3-216ENST00000570989 PKD2Q13563 968 aa19.5■□□□□ 0.71
ITGA3-216ENST00000570989 ZBTB47Q9UFB7 747 aaPredicted RBP19.5■□□□□ 0.71
ITGA3-216ENST00000570989 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
ITGA3-216ENST00000570989 ABCA9Q8IUA7 1624 aa19.49■□□□□ 0.71
ITGA3-216ENST00000570989 USP47Q96K76 1375 aa19.48■□□□□ 0.71
ITGA3-216ENST00000570989 KDM5CP41229 1560 aa19.48■□□□□ 0.71
ITGA3-216ENST00000570989 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
ITGA3-216ENST00000570989 CNGB1Q14028 1251 aaPredicted RBP19.47■□□□□ 0.71
ITGA3-216ENST00000570989 UNC13BO14795 1591 aa19.46■□□□□ 0.71
ITGA3-216ENST00000570989 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
ITGA3-216ENST00000570989 TRAPPC8Q9Y2L5 1435 aa19.45■□□□□ 0.7
ITGA3-216ENST00000570989 ANO8Q9HCE9 1232 aaPredicted RBP19.45■□□□□ 0.7
ITGA3-216ENST00000570989 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
ITGA3-216ENST00000570989 LRPPRCP42704 1394 aaKnown RBP19.44■□□□□ 0.7
ITGA3-216ENST00000570989 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
ITGA3-216ENST00000570989 FANCAO15360 1455 aa19.42■□□□□ 0.7
ITGA3-216ENST00000570989 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
ITGA3-216ENST00000570989 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
ITGA3-216ENST00000570989 ERBINQ96RT1 1412 aa19.4■□□□□ 0.7
ITGA3-216ENST00000570989 ZFYVE16Q7Z3T8 1539 aa19.39■□□□□ 0.69
ITGA3-216ENST00000570989 RRP1P56182 461 aaKnown RBP19.38■□□□□ 0.69
ITGA3-216ENST00000570989 IQGAP3Q86VI3 1631 aa19.38■□□□□ 0.69
ITGA3-216ENST00000570989 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
ITGA3-216ENST00000570989 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
ITGA3-216ENST00000570989 CD109Q6YHK3 1445 aa19.37■□□□□ 0.69
ITGA3-216ENST00000570989 EXOC6Q8TAG9 804 aa19.37■□□□□ 0.69
ITGA3-216ENST00000570989 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
ITGA3-216ENST00000570989 RTEL1-TNFRSF6BF6WH68 1400 aa19.36■□□□□ 0.69
ITGA3-216ENST00000570989 RALGAPBQ86X10 1494 aa19.35■□□□□ 0.69
ITGA3-216ENST00000570989 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
ITGA3-216ENST00000570989 IL27Q8NEV9 243 aa19.35■□□□□ 0.69
ITGA3-216ENST00000570989 SPAG9O60271 1321 aaKnown RBP19.35■□□□□ 0.69
ITGA3-216ENST00000570989 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
ITGA3-216ENST00000570989 ZNF326Q5BKZ1 582 aaKnown RBP19.34■□□□□ 0.69
ITGA3-216ENST00000570989 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
ITGA3-216ENST00000570989 ADGRL1O94910 1474 aa19.34■□□□□ 0.69
ITGA3-216ENST00000570989 E9PCH4 1651 aa19.34■□□□□ 0.69
ITGA3-216ENST00000570989 INO80Q9ULG1 1556 aaPredicted RBP19.34■□□□□ 0.69
ITGA3-216ENST00000570989 BRD4O60885 1362 aaPredicted RBP19.34■□□□□ 0.69
ITGA3-216ENST00000570989 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.69
ITGA3-216ENST00000570989 PDE4AP27815 886 aa19.33■□□□□ 0.68
ITGA3-216ENST00000570989 UBE2Q2Q8WVN8 375 aa19.32■□□□□ 0.68
ITGA3-216ENST00000570989 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
ITGA3-216ENST00000570989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
ITGA3-216ENST00000570989 BACH2Q9BYV9 841 aa19.31■□□□□ 0.68
ITGA3-216ENST00000570989 COL17A1Q9UMD9 1497 aaPredicted RBP19.31■□□□□ 0.68
ITGA3-216ENST00000570989 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
ITGA3-216ENST00000570989 MYBBP1AQ9BQG0 1328 aaKnown RBP19.3■□□□□ 0.68
ITGA3-216ENST00000570989 DAXXQ9UER7 740 aaPredicted RBP19.3■□□□□ 0.68
ITGA3-216ENST00000570989 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
ITGA3-216ENST00000570989 RCAN3Q9UKA8 241 aa19.29■□□□□ 0.68
ITGA3-216ENST00000570989 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
ITGA3-216ENST00000570989 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
ITGA3-216ENST00000570989 MS4A1P11836 297 aa19.28■□□□□ 0.68
ITGA3-216ENST00000570989 NEFMP07197 916 aa19.27■□□□□ 0.68
ITGA3-216ENST00000570989 USP35Q9P2H5 1018 aa19.27■□□□□ 0.68
ITGA3-216ENST00000570989 PLA2R1Q13018 1463 aa19.27■□□□□ 0.68
ITGA3-216ENST00000570989 CCDC144AA2RUR9 1427 aa19.27■□□□□ 0.67
ITGA3-216ENST00000570989 DEPDC5O75140 1603 aa19.25■□□□□ 0.67
ITGA3-216ENST00000570989 RALBP1Q15311 655 aa19.25■□□□□ 0.67
ITGA3-216ENST00000570989 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
ITGA3-216ENST00000570989 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
ITGA3-216ENST00000570989 EIF5BO60841 1220 aaKnown RBP19.24■□□□□ 0.67
ITGA3-216ENST00000570989 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
ITGA3-216ENST00000570989 ATP10AO60312 1499 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms