RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SHANK2Q9UPX8 1470 aa23.7■■□□□ 1.38
RAB40B-203ENST00000570676 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.38
RAB40B-203ENST00000570676 ZC3H13Q5T200 1668 aaKnown RBP23.69■■□□□ 1.38
RAB40B-203ENST00000570676 NCOA1Q15788 1441 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 FGD6Q6ZV73 1430 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 KIF3BO15066 747 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 APLP2Q06481 763 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 CAMSAP1Q5T5Y3 1602 aa23.68■■□□□ 1.38
RAB40B-203ENST00000570676 PZPP20742 1482 aa23.66■■□□□ 1.38
RAB40B-203ENST00000570676 ABCC5O15440 1437 aa23.65■■□□□ 1.38
RAB40B-203ENST00000570676 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.38
RAB40B-203ENST00000570676 PTPRTO14522 1441 aa23.63■■□□□ 1.37
RAB40B-203ENST00000570676 CEP152O94986 1710 aa23.63■■□□□ 1.37
RAB40B-203ENST00000570676 DAPK1P53355 1430 aa23.63■■□□□ 1.37
RAB40B-203ENST00000570676 ABCC3O15438 1527 aa23.63■■□□□ 1.37
RAB40B-203ENST00000570676 PLA2R1Q13018 1463 aa23.61■■□□□ 1.37
RAB40B-203ENST00000570676 FBXO41Q8TF61 875 aa23.6■■□□□ 1.37
RAB40B-203ENST00000570676 PRDM15P57071 1507 aaPredicted RBP23.59■■□□□ 1.37
RAB40B-203ENST00000570676 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
RAB40B-203ENST00000570676 DEPDC5O75140 1603 aa23.58■■□□□ 1.36
RAB40B-203ENST00000570676 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
RAB40B-203ENST00000570676 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
RAB40B-203ENST00000570676 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
RAB40B-203ENST00000570676 TNRQ92752 1358 aa23.55■■□□□ 1.36
RAB40B-203ENST00000570676 SPATA31D1Q6ZQQ2 1576 aa23.55■■□□□ 1.36
RAB40B-203ENST00000570676 POLR1AO95602 1720 aaPredicted RBP23.55■■□□□ 1.36
RAB40B-203ENST00000570676 WASHC2CQ9Y4E1 1318 aa23.55■■□□□ 1.36
RAB40B-203ENST00000570676 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
RAB40B-203ENST00000570676 FBXO31Q5XUX0 539 aaPredicted RBP23.52■■□□□ 1.36
RAB40B-203ENST00000570676 CERKQ8TCT0 537 aa23.51■■□□□ 1.35
RAB40B-203ENST00000570676 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
RAB40B-203ENST00000570676 NEURL4Q96JN8 1562 aa23.49■■□□□ 1.35
RAB40B-203ENST00000570676 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
RAB40B-203ENST00000570676 NLRP1Q9C000 1473 aa23.49■■□□□ 1.35
RAB40B-203ENST00000570676 VWDEQ8N2E2 1590 aa23.46■■□□□ 1.35
RAB40B-203ENST00000570676 NCKAP5LQ9HCH0 1330 aa23.46■■□□□ 1.35
RAB40B-203ENST00000570676 UGGT1Q9NYU2 1555 aa23.44■■□□□ 1.34
RAB40B-203ENST00000570676 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
RAB40B-203ENST00000570676 CFAP65Q6ZU64 1925 aaKnown RBP23.44■■□□□ 1.34
RAB40B-203ENST00000570676 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
RAB40B-203ENST00000570676 PKD2Q13563 968 aa23.43■■□□□ 1.34
RAB40B-203ENST00000570676 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
RAB40B-203ENST00000570676 LMTK2Q8IWU2 1503 aa23.41■■□□□ 1.34
RAB40B-203ENST00000570676 UBR1Q8IWV7 1749 aa23.41■■□□□ 1.34
RAB40B-203ENST00000570676 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
RAB40B-203ENST00000570676 IQSEC2Q5JU85 1478 aa23.39■■□□□ 1.34
RAB40B-203ENST00000570676 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
RAB40B-203ENST00000570676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.36■■□□□ 1.33
RAB40B-203ENST00000570676 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
RAB40B-203ENST00000570676 ZNF335Q9H4Z2 1342 aaPredicted RBP23.34■■□□□ 1.33
RAB40B-203ENST00000570676 IQGAP1P46940 1657 aa23.33■■□□□ 1.33
RAB40B-203ENST00000570676 MED14O60244 1454 aa23.33■■□□□ 1.33
RAB40B-203ENST00000570676 PIK3C2BO00750 1634 aa23.33■■□□□ 1.32
RAB40B-203ENST00000570676 UNC13BO14795 1591 aa23.32■■□□□ 1.32
RAB40B-203ENST00000570676 KANK1Q14678 1352 aa23.32■■□□□ 1.32
RAB40B-203ENST00000570676 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
RAB40B-203ENST00000570676 SYNMO15061 1565 aa23.31■■□□□ 1.32
RAB40B-203ENST00000570676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.32
RAB40B-203ENST00000570676 KDM5AP29375 1690 aaKnown RBP23.29■■□□□ 1.32
RAB40B-203ENST00000570676 THEMISQ8N1K5 641 aaPredicted RBP23.29■■□□□ 1.32
RAB40B-203ENST00000570676 TET3O43151 1660 aa23.28■■□□□ 1.32
RAB40B-203ENST00000570676 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
RAB40B-203ENST00000570676 NPHP4O75161 1426 aaPredicted RBP23.27■■□□□ 1.32
RAB40B-203ENST00000570676 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
RAB40B-203ENST00000570676 SLIT1O75093 1534 aa23.27■■□□□ 1.32
RAB40B-203ENST00000570676 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
RAB40B-203ENST00000570676 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
RAB40B-203ENST00000570676 NOS1P29475 1434 aa23.24■■□□□ 1.31
RAB40B-203ENST00000570676 CPS1P31327 1500 aa23.23■■□□□ 1.31
RAB40B-203ENST00000570676 STRCP1A6NGW2 1772 aa23.23■■□□□ 1.31
RAB40B-203ENST00000570676 IQGAP3Q86VI3 1631 aa23.22■■□□□ 1.31
RAB40B-203ENST00000570676 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
RAB40B-203ENST00000570676 RPRD2Q5VT52 1461 aaKnown RBP23.21■■□□□ 1.31
RAB40B-203ENST00000570676 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
RAB40B-203ENST00000570676 ADGRB3O60242 1522 aa23.2■■□□□ 1.3
RAB40B-203ENST00000570676 E9PCH4 1651 aa23.19■■□□□ 1.3
RAB40B-203ENST00000570676 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
RAB40B-203ENST00000570676 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
RAB40B-203ENST00000570676 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.29
RAB40B-203ENST00000570676 LTKP29376 864 aa23.11■■□□□ 1.29
RAB40B-203ENST00000570676 IDI1Q13907 227 aa23.11■■□□□ 1.29
RAB40B-203ENST00000570676 TMEM131LA2VDJ0 1609 aa23.09■■□□□ 1.29
RAB40B-203ENST00000570676 ALKQ9UM73 1620 aa23.08■■□□□ 1.29
RAB40B-203ENST00000570676 ITGAEP38570 1179 aa23.08■■□□□ 1.29
RAB40B-203ENST00000570676 LRRC7Q96NW7 1537 aa23.07■■□□□ 1.28
RAB40B-203ENST00000570676 XIRP1Q702N8 1843 aaKnown RBP23.06■■□□□ 1.28
RAB40B-203ENST00000570676 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
RAB40B-203ENST00000570676 UBAP1LF5GYI3 381 aa23.05■■□□□ 1.28
RAB40B-203ENST00000570676 SLC52A1Q9NWF4 448 aa23.04■■□□□ 1.28
RAB40B-203ENST00000570676 SPHKAPQ2M3C7 1700 aa23.03■■□□□ 1.28
RAB40B-203ENST00000570676 ZFYVE9O95405 1425 aa23.03■■□□□ 1.28
RAB40B-203ENST00000570676 STAG3Q9UJ98 1225 aa23.03■■□□□ 1.28
RAB40B-203ENST00000570676 EID1Q9Y6B2 187 aa23.02■■□□□ 1.28
RAB40B-203ENST00000570676 NUP155O75694 1391 aa23.01■■□□□ 1.27
RAB40B-203ENST00000570676 NWD1Q149M9 1564 aa23■■□□□ 1.27
RAB40B-203ENST00000570676 NAIPQ13075 1403 aa22.99■■□□□ 1.27
RAB40B-203ENST00000570676 RIMS2Q9UQ26 1411 aa22.95■■□□□ 1.26
RAB40B-203ENST00000570676 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms