RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
SMG6-206ENST00000570668 NPATQ14207 1427 aa17.16■□□□□ 0.34
SMG6-206ENST00000570668 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
SMG6-206ENST00000570668 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
SMG6-206ENST00000570668 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
SMG6-206ENST00000570668 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
SMG6-206ENST00000570668 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
SMG6-206ENST00000570668 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
SMG6-206ENST00000570668 HSPA2P54652 639 aa17.14■□□□□ 0.33
SMG6-206ENST00000570668 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
SMG6-206ENST00000570668 KDM5DQ9BY66 1539 aa17.14■□□□□ 0.33
SMG6-206ENST00000570668 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
SMG6-206ENST00000570668 ERBINQ96RT1 1412 aa17.13■□□□□ 0.33
SMG6-206ENST00000570668 ADGRL2O95490 1459 aa17.13■□□□□ 0.33
SMG6-206ENST00000570668 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
SMG6-206ENST00000570668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMG6-206ENST00000570668 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
SMG6-206ENST00000570668 ABCC3O15438 1527 aa17.08■□□□□ 0.32
SMG6-206ENST00000570668 PZPP20742 1482 aa17.08■□□□□ 0.32
SMG6-206ENST00000570668 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
SMG6-206ENST00000570668 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
SMG6-206ENST00000570668 RRBP1Q9P2E9 1410 aaKnown RBP17.05■□□□□ 0.32
SMG6-206ENST00000570668 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
SMG6-206ENST00000570668 DEPDC5O75140 1603 aa17.05■□□□□ 0.32
SMG6-206ENST00000570668 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
SMG6-206ENST00000570668 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
SMG6-206ENST00000570668 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
SMG6-206ENST00000570668 TNRQ92752 1358 aa17.02■□□□□ 0.32
SMG6-206ENST00000570668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMG6-206ENST00000570668 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
SMG6-206ENST00000570668 CEP152O94986 1710 aa17.01■□□□□ 0.31
SMG6-206ENST00000570668 KANK1Q14678 1352 aa17.01■□□□□ 0.31
SMG6-206ENST00000570668 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
SMG6-206ENST00000570668 CAMSAP1Q5T5Y3 1602 aa17■□□□□ 0.31
SMG6-206ENST00000570668 ITGAEP38570 1179 aa17■□□□□ 0.31
SMG6-206ENST00000570668 STRCQ7RTU9 1775 aa17■□□□□ 0.31
SMG6-206ENST00000570668 VWDEQ8N2E2 1590 aa16.99■□□□□ 0.31
SMG6-206ENST00000570668 ARHGAP31Q2M1Z3 1444 aa16.99■□□□□ 0.31
SMG6-206ENST00000570668 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
SMG6-206ENST00000570668 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
SMG6-206ENST00000570668 LMTK2Q8IWU2 1503 aa16.98■□□□□ 0.31
SMG6-206ENST00000570668 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
SMG6-206ENST00000570668 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
SMG6-206ENST00000570668 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
SMG6-206ENST00000570668 PLA2R1Q13018 1463 aa16.95■□□□□ 0.3
SMG6-206ENST00000570668 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
SMG6-206ENST00000570668 PTPRTO14522 1441 aa16.93■□□□□ 0.3
SMG6-206ENST00000570668 UNC13BO14795 1591 aa16.92■□□□□ 0.3
SMG6-206ENST00000570668 PKD2Q13563 968 aa16.91■□□□□ 0.3
SMG6-206ENST00000570668 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
SMG6-206ENST00000570668 THEMISQ8N1K5 641 aaPredicted RBP16.9■□□□□ 0.3
SMG6-206ENST00000570668 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
SMG6-206ENST00000570668 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.3
SMG6-206ENST00000570668 RPRD2Q5VT52 1461 aaKnown RBP16.88■□□□□ 0.29
SMG6-206ENST00000570668 NOS1P29475 1434 aa16.87■□□□□ 0.29
SMG6-206ENST00000570668 TET3O43151 1660 aa16.87■□□□□ 0.29
SMG6-206ENST00000570668 NAIPQ13075 1403 aa16.87■□□□□ 0.29
SMG6-206ENST00000570668 NUP155O75694 1391 aa16.86■□□□□ 0.29
SMG6-206ENST00000570668 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
SMG6-206ENST00000570668 ANKLE2Q86XL3 938 aa16.84■□□□□ 0.29
SMG6-206ENST00000570668 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
SMG6-206ENST00000570668 GCC2Q8IWJ2 1684 aa16.84■□□□□ 0.29
SMG6-206ENST00000570668 SYNMO15061 1565 aa16.83■□□□□ 0.28
SMG6-206ENST00000570668 UBR1Q8IWV7 1749 aa16.83■□□□□ 0.28
SMG6-206ENST00000570668 IDI1Q13907 227 aa16.82■□□□□ 0.28
SMG6-206ENST00000570668 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
SMG6-206ENST00000570668 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
SMG6-206ENST00000570668 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
SMG6-206ENST00000570668 PIK3C2BO00750 1634 aa16.8■□□□□ 0.28
SMG6-206ENST00000570668 MED14O60244 1454 aa16.8■□□□□ 0.28
SMG6-206ENST00000570668 E9PCH4 1651 aa16.79■□□□□ 0.28
SMG6-206ENST00000570668 KDM5AP29375 1690 aaKnown RBP16.79■□□□□ 0.28
SMG6-206ENST00000570668 CERKQ8TCT0 537 aa16.79■□□□□ 0.28
SMG6-206ENST00000570668 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
SMG6-206ENST00000570668 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
SMG6-206ENST00000570668 SLIT1O75093 1534 aa16.78■□□□□ 0.28
SMG6-206ENST00000570668 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
SMG6-206ENST00000570668 LTBP4Q8N2S1 1624 aa16.77■□□□□ 0.27
SMG6-206ENST00000570668 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
SMG6-206ENST00000570668 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
SMG6-206ENST00000570668 FBXO41Q8TF61 875 aa16.75■□□□□ 0.27
SMG6-206ENST00000570668 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
SMG6-206ENST00000570668 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
SMG6-206ENST00000570668 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
SMG6-206ENST00000570668 LTKP29376 864 aa16.74■□□□□ 0.27
SMG6-206ENST00000570668 TXNDC2Q86VQ3 553 aa16.74■□□□□ 0.27
SMG6-206ENST00000570668 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
SMG6-206ENST00000570668 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
SMG6-206ENST00000570668 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
SMG6-206ENST00000570668 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
SMG6-206ENST00000570668 IQSEC2Q5JU85 1478 aa16.68■□□□□ 0.26
SMG6-206ENST00000570668 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
SMG6-206ENST00000570668 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
SMG6-206ENST00000570668 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
SMG6-206ENST00000570668 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
SMG6-206ENST00000570668 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
SMG6-206ENST00000570668 SETD5Q9C0A6 1442 aa16.65■□□□□ 0.26
SMG6-206ENST00000570668 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
SMG6-206ENST00000570668 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
SMG6-206ENST00000570668 CPS1P31327 1500 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms