RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 XIRP1Q702N8 1843 aaKnown RBP12.13□□□□□ -0.47
SMG6-205ENST00000570659 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
SMG6-205ENST00000570659 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
SMG6-205ENST00000570659 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
SMG6-205ENST00000570659 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
SMG6-205ENST00000570659 TOM1O60784 492 aa12.11□□□□□ -0.47
SMG6-205ENST00000570659 TNRQ92752 1358 aa12.1□□□□□ -0.47
SMG6-205ENST00000570659 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
SMG6-205ENST00000570659 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
SMG6-205ENST00000570659 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
SMG6-205ENST00000570659 MED14O60244 1454 aa12.08□□□□□ -0.47
SMG6-205ENST00000570659 IQGAP1P46940 1657 aa12.08□□□□□ -0.48
SMG6-205ENST00000570659 KIAA1107Q9UPP5 1409 aa12.08□□□□□ -0.48
SMG6-205ENST00000570659 PZPP20742 1482 aa12.08□□□□□ -0.48
SMG6-205ENST00000570659 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.48
SMG6-205ENST00000570659 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
SMG6-205ENST00000570659 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
SMG6-205ENST00000570659 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
SMG6-205ENST00000570659 UGGT1Q9NYU2 1555 aa12.04□□□□□ -0.48
SMG6-205ENST00000570659 KDM5DQ9BY66 1539 aa12.03□□□□□ -0.48
SMG6-205ENST00000570659 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
SMG6-205ENST00000570659 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
SMG6-205ENST00000570659 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.48
SMG6-205ENST00000570659 SYNMO15061 1565 aa12.02□□□□□ -0.49
SMG6-205ENST00000570659 ANKLE2Q86XL3 938 aa12.02□□□□□ -0.49
SMG6-205ENST00000570659 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.49
SMG6-205ENST00000570659 KIF3BO15066 747 aa12.01□□□□□ -0.49
SMG6-205ENST00000570659 NCOA2Q15596 1464 aa12.01□□□□□ -0.49
SMG6-205ENST00000570659 MROH1Q8NDA8 1641 aa12□□□□□ -0.49
SMG6-205ENST00000570659 LTKP29376 864 aa11.99□□□□□ -0.49
SMG6-205ENST00000570659 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
SMG6-205ENST00000570659 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
SMG6-205ENST00000570659 PLEKHH2Q8IVE3 1493 aa11.99□□□□□ -0.49
SMG6-205ENST00000570659 UBR1Q8IWV7 1749 aa11.99□□□□□ -0.49
SMG6-205ENST00000570659 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
SMG6-205ENST00000570659 CFAP65Q6ZU64 1925 aaKnown RBP11.98□□□□□ -0.49
SMG6-205ENST00000570659 ABCC3O15438 1527 aa11.97□□□□□ -0.49
SMG6-205ENST00000570659 MAP3K1Q13233 1512 aa11.96□□□□□ -0.49
SMG6-205ENST00000570659 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
SMG6-205ENST00000570659 ERVK-7P63135 1459 aa11.96□□□□□ -0.49
SMG6-205ENST00000570659 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.49
SMG6-205ENST00000570659 ROBO1Q9Y6N7 1651 aa11.96□□□□□ -0.5
SMG6-205ENST00000570659 CEP152O94986 1710 aa11.95□□□□□ -0.5
SMG6-205ENST00000570659 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
SMG6-205ENST00000570659 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
SMG6-205ENST00000570659 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
SMG6-205ENST00000570659 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
SMG6-205ENST00000570659 LRP6O75581 1613 aa11.93□□□□□ -0.5
SMG6-205ENST00000570659 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
SMG6-205ENST00000570659 SCAF11Q99590 1463 aaKnown RBP11.92□□□□□ -0.5
SMG6-205ENST00000570659 CHIC1Q5VXU3 224 aa11.92□□□□□ -0.5
SMG6-205ENST00000570659 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
SMG6-205ENST00000570659 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
SMG6-205ENST00000570659 SLIT1O75093 1534 aa11.91□□□□□ -0.5
SMG6-205ENST00000570659 MTUS2Q5JR59 1369 aa11.9□□□□□ -0.5
SMG6-205ENST00000570659 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
SMG6-205ENST00000570659 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMG6-205ENST00000570659 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
SMG6-205ENST00000570659 EHBP1L1Q8N3D4 1523 aa11.88□□□□□ -0.51
SMG6-205ENST00000570659 COL16A1Q07092 1604 aaPredicted RBP11.87□□□□□ -0.51
SMG6-205ENST00000570659 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
SMG6-205ENST00000570659 TET3O43151 1660 aa11.87□□□□□ -0.51
SMG6-205ENST00000570659 PHLPP1O60346 1717 aa11.86□□□□□ -0.51
SMG6-205ENST00000570659 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
SMG6-205ENST00000570659 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
SMG6-205ENST00000570659 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
SMG6-205ENST00000570659 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
SMG6-205ENST00000570659 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
SMG6-205ENST00000570659 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
SMG6-205ENST00000570659 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
SMG6-205ENST00000570659 PRDM15P57071 1507 aaPredicted RBP11.81□□□□□ -0.52
SMG6-205ENST00000570659 TMEM2Q9UHN6 1383 aa11.81□□□□□ -0.52
SMG6-205ENST00000570659 KCNA6P17658 529 aa11.78□□□□□ -0.52
SMG6-205ENST00000570659 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
SMG6-205ENST00000570659 DIP2AQ14689 1571 aa11.78□□□□□ -0.52
SMG6-205ENST00000570659 JCADQ9P266 1359 aa11.78□□□□□ -0.52
SMG6-205ENST00000570659 MYO5BQ9ULV0 1848 aa11.77□□□□□ -0.52
SMG6-205ENST00000570659 KDM5AP29375 1690 aaKnown RBP11.77□□□□□ -0.53
SMG6-205ENST00000570659 ARHGAP31Q2M1Z3 1444 aa11.77□□□□□ -0.53
SMG6-205ENST00000570659 EFCAB6Q5THR3 1501 aa11.76□□□□□ -0.53
SMG6-205ENST00000570659 IDI1Q13907 227 aa11.76□□□□□ -0.53
SMG6-205ENST00000570659 SLAIN2Q9P270 581 aa11.76□□□□□ -0.53
SMG6-205ENST00000570659 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
SMG6-205ENST00000570659 NKTRP30414 1462 aaKnown RBP11.75□□□□□ -0.53
SMG6-205ENST00000570659 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
SMG6-205ENST00000570659 RGS12O14924 1447 aa11.74□□□□□ -0.53
SMG6-205ENST00000570659 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
SMG6-205ENST00000570659 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
SMG6-205ENST00000570659 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
SMG6-205ENST00000570659 AHDC1Q5TGY3 1603 aaPredicted RBP11.72□□□□□ -0.53
SMG6-205ENST00000570659 ADGRB3O60242 1522 aa11.72□□□□□ -0.53
SMG6-205ENST00000570659 DUOX2Q9NRD8 1548 aa11.72□□□□□ -0.53
SMG6-205ENST00000570659 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.53
SMG6-205ENST00000570659 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.53
SMG6-205ENST00000570659 ZFYVE9O95405 1425 aa11.71□□□□□ -0.53
SMG6-205ENST00000570659 TSPY4P0CV99 314 aa11.71□□□□□ -0.53
SMG6-205ENST00000570659 TSPY10P0CW01 314 aa11.71□□□□□ -0.53
SMG6-205ENST00000570659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMG6-205ENST00000570659 EID1Q9Y6B2 187 aa11.71□□□□□ -0.53
SMG6-205ENST00000570659 NOS1P29475 1434 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms