RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 CEBPAP49715 358 aaPredicted RBP10.51□□□□□ -0.73
SMG6-204ENST00000570606 ESF1Q9H501 851 aaKnown RBP10.51□□□□□ -0.73
SMG6-204ENST00000570606 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
SMG6-204ENST00000570606 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
SMG6-204ENST00000570606 STRCQ7RTU9 1775 aa10.5□□□□□ -0.73
SMG6-204ENST00000570606 PKD2Q13563 968 aa10.5□□□□□ -0.73
SMG6-204ENST00000570606 MROH2AA6NES4 1674 aa10.5□□□□□ -0.73
SMG6-204ENST00000570606 ATP7AQ04656 1500 aa10.49□□□□□ -0.73
SMG6-204ENST00000570606 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
SMG6-204ENST00000570606 INO80Q9ULG1 1556 aaPredicted RBP10.49□□□□□ -0.73
SMG6-204ENST00000570606 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
SMG6-204ENST00000570606 CNTLNQ9NXG0 1405 aa10.49□□□□□ -0.73
SMG6-204ENST00000570606 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
SMG6-204ENST00000570606 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
SMG6-204ENST00000570606 EHBP1L1Q8N3D4 1523 aa10.48□□□□□ -0.73
SMG6-204ENST00000570606 SPAG9O60271 1321 aaKnown RBP10.47□□□□□ -0.73
SMG6-204ENST00000570606 TIAM1Q13009 1591 aa10.47□□□□□ -0.73
SMG6-204ENST00000570606 CLTCQ00610 1675 aaKnown RBP10.47□□□□□ -0.73
SMG6-204ENST00000570606 CERKQ8TCT0 537 aa10.46□□□□□ -0.73
SMG6-204ENST00000570606 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.73
SMG6-204ENST00000570606 PLXNC1O60486 1568 aa10.46□□□□□ -0.74
SMG6-204ENST00000570606 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.74
SMG6-204ENST00000570606 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
SMG6-204ENST00000570606 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
SMG6-204ENST00000570606 HNRNPMP52272 730 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMG6-204ENST00000570606 KLHL34Q8N239 644 aa10.44□□□□□ -0.74
SMG6-204ENST00000570606 MYO3AQ8NEV4 1616 aa10.44□□□□□ -0.74
SMG6-204ENST00000570606 A2MP01023 1474 aa10.43□□□□□ -0.74
SMG6-204ENST00000570606 CEP162Q5TB80 1403 aa10.43□□□□□ -0.74
SMG6-204ENST00000570606 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
SMG6-204ENST00000570606 ZNF142P52746 1687 aaPredicted RBP10.43□□□□□ -0.74
SMG6-204ENST00000570606 NPATQ14207 1427 aa10.42□□□□□ -0.74
SMG6-204ENST00000570606 PTPRTO14522 1441 aa10.41□□□□□ -0.74
SMG6-204ENST00000570606 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
SMG6-204ENST00000570606 CAMSAP1Q5T5Y3 1602 aa10.41□□□□□ -0.74
SMG6-204ENST00000570606 MIER1Q8N108 512 aa10.4□□□□□ -0.74
SMG6-204ENST00000570606 ZMYM3Q14202 1370 aa10.39□□□□□ -0.75
SMG6-204ENST00000570606 CEP170BQ9Y4F5 1589 aaPredicted RBP10.39□□□□□ -0.75
SMG6-204ENST00000570606 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
SMG6-204ENST00000570606 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
SMG6-204ENST00000570606 GGT6Q6P531 493 aa10.38□□□□□ -0.75
SMG6-204ENST00000570606 ZNF644Q9H582 1327 aaPredicted RBP10.37□□□□□ -0.75
SMG6-204ENST00000570606 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
SMG6-204ENST00000570606 MBD5Q9P267 1494 aa10.37□□□□□ -0.75
SMG6-204ENST00000570606 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
SMG6-204ENST00000570606 PTPRKQ15262 1439 aa10.36□□□□□ -0.75
SMG6-204ENST00000570606 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
SMG6-204ENST00000570606 KDM5DQ9BY66 1539 aa10.35□□□□□ -0.75
SMG6-204ENST00000570606 POLR1AO95602 1720 aaPredicted RBP10.35□□□□□ -0.75
SMG6-204ENST00000570606 PLA2R1Q13018 1463 aa10.35□□□□□ -0.75
SMG6-204ENST00000570606 IQSEC2Q5JU85 1478 aa10.35□□□□□ -0.75
SMG6-204ENST00000570606 FAM135AQ9P2D6 1515 aa10.34□□□□□ -0.75
SMG6-204ENST00000570606 ARHGEF5Q12774 1597 aa10.34□□□□□ -0.75
SMG6-204ENST00000570606 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
SMG6-204ENST00000570606 A2ML1A8K2U0 1454 aa10.33□□□□□ -0.76
SMG6-204ENST00000570606 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
SMG6-204ENST00000570606 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
SMG6-204ENST00000570606 SPATA31D1Q6ZQQ2 1576 aa10.32□□□□□ -0.76
SMG6-204ENST00000570606 TCOF1Q13428 1488 aaKnown RBP10.32□□□□□ -0.76
SMG6-204ENST00000570606 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
SMG6-204ENST00000570606 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
SMG6-204ENST00000570606 DNMT1P26358 1616 aaKnown RBP10.32□□□□□ -0.76
SMG6-204ENST00000570606 PZPP20742 1482 aa10.3□□□□□ -0.76
SMG6-204ENST00000570606 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
SMG6-204ENST00000570606 TNRQ92752 1358 aa10.3□□□□□ -0.76
SMG6-204ENST00000570606 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
SMG6-204ENST00000570606 KIF3BO15066 747 aa10.3□□□□□ -0.76
SMG6-204ENST00000570606 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
SMG6-204ENST00000570606 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
SMG6-204ENST00000570606 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
SMG6-204ENST00000570606 ZC3H13Q5T200 1668 aaKnown RBP10.3□□□□□ -0.76
SMG6-204ENST00000570606 ZNF335Q9H4Z2 1342 aaPredicted RBP10.3□□□□□ -0.76
SMG6-204ENST00000570606 RNF17Q9BXT8 1623 aaKnown RBP10.29□□□□□ -0.76
SMG6-204ENST00000570606 PLEKHG5O94827 1062 aa10.29□□□□□ -0.76
SMG6-204ENST00000570606 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
SMG6-204ENST00000570606 RSPH4AQ5TD94 716 aa10.28□□□□□ -0.76
SMG6-204ENST00000570606 EIF2AK4Q9P2K8 1649 aaKnown RBP10.28□□□□□ -0.76
SMG6-204ENST00000570606 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
SMG6-204ENST00000570606 CEP152O94986 1710 aa10.27□□□□□ -0.76
SMG6-204ENST00000570606 NEURL4Q96JN8 1562 aa10.27□□□□□ -0.76
SMG6-204ENST00000570606 TSPY4P0CV99 314 aa10.27□□□□□ -0.77
SMG6-204ENST00000570606 TSPY10P0CW01 314 aa10.27□□□□□ -0.77
SMG6-204ENST00000570606 CROCC2H7BZ55 1655 aa10.26□□□□□ -0.77
SMG6-204ENST00000570606 NLRP1Q9C000 1473 aa10.26□□□□□ -0.77
SMG6-204ENST00000570606 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
SMG6-204ENST00000570606 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
SMG6-204ENST00000570606 ABCC3O15438 1527 aa10.26□□□□□ -0.77
SMG6-204ENST00000570606 MAP3K1Q13233 1512 aa10.26□□□□□ -0.77
SMG6-204ENST00000570606 UGGT1Q9NYU2 1555 aa10.26□□□□□ -0.77
SMG6-204ENST00000570606 MYOM3Q5VTT5 1437 aa10.25□□□□□ -0.77
SMG6-204ENST00000570606 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
SMG6-204ENST00000570606 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
SMG6-204ENST00000570606 IQGAP1P46940 1657 aa10.24□□□□□ -0.77
SMG6-204ENST00000570606 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
SMG6-204ENST00000570606 CPS1P31327 1500 aa10.23□□□□□ -0.77
SMG6-204ENST00000570606 DEPDC5O75140 1603 aa10.23□□□□□ -0.77
SMG6-204ENST00000570606 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
SMG6-204ENST00000570606 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
SMG6-204ENST00000570606 RGL2O15211 777 aa10.23□□□□□ -0.77
SMG6-204ENST00000570606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms