RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 MAST1Q9Y2H9 1570 aa9.87□□□□□ -0.83
CTDNEP1-204ENST00000570484 ATP7AQ04656 1500 aa9.87□□□□□ -0.83
CTDNEP1-204ENST00000570484 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
CTDNEP1-204ENST00000570484 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
CTDNEP1-204ENST00000570484 SPAG9O60271 1321 aaKnown RBP9.86□□□□□ -0.83
CTDNEP1-204ENST00000570484 KDM5CP41229 1560 aa9.86□□□□□ -0.83
CTDNEP1-204ENST00000570484 CHIC2Q9UKJ5 165 aa9.86□□□□□ -0.83
CTDNEP1-204ENST00000570484 ROCK1Q13464 1354 aa9.86□□□□□ -0.83
CTDNEP1-204ENST00000570484 KDM6BO15054 1643 aa9.85□□□□□ -0.83
CTDNEP1-204ENST00000570484 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
CTDNEP1-204ENST00000570484 PLXNC1O60486 1568 aa9.85□□□□□ -0.83
CTDNEP1-204ENST00000570484 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-204ENST00000570484 HFM1A2PYH4 1435 aa9.84□□□□□ -0.83
CTDNEP1-204ENST00000570484 RTEL1-TNFRSF6BF6WH68 1400 aa9.84□□□□□ -0.83
CTDNEP1-204ENST00000570484 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
CTDNEP1-204ENST00000570484 POTEHQ6S545 545 aa9.84□□□□□ -0.83
CTDNEP1-204ENST00000570484 KIF15Q9NS87 1388 aa9.84□□□□□ -0.83
CTDNEP1-204ENST00000570484 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
CTDNEP1-204ENST00000570484 PTPRKQ15262 1439 aa9.83□□□□□ -0.84
CTDNEP1-204ENST00000570484 RAPGEF3O95398 923 aa9.83□□□□□ -0.84
CTDNEP1-204ENST00000570484 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
CTDNEP1-204ENST00000570484 RICTORQ6R327 1708 aa9.82□□□□□ -0.84
CTDNEP1-204ENST00000570484 MAGI2Q86UL8 1455 aa9.82□□□□□ -0.84
CTDNEP1-204ENST00000570484 MLH3Q9UHC1 1453 aa9.82□□□□□ -0.84
CTDNEP1-204ENST00000570484 GCC2Q8IWJ2 1684 aa9.82□□□□□ -0.84
CTDNEP1-204ENST00000570484 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
CTDNEP1-204ENST00000570484 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
CTDNEP1-204ENST00000570484 DUOX2Q9NRD8 1548 aa9.81□□□□□ -0.84
CTDNEP1-204ENST00000570484 NCOA1Q15788 1441 aa9.81□□□□□ -0.84
CTDNEP1-204ENST00000570484 ERBINQ96RT1 1412 aa9.81□□□□□ -0.84
CTDNEP1-204ENST00000570484 SETD5Q9C0A6 1442 aa9.81□□□□□ -0.84
CTDNEP1-204ENST00000570484 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-204ENST00000570484 NAIPQ13075 1403 aa9.8□□□□□ -0.84
CTDNEP1-204ENST00000570484 ANKRD50Q9ULJ7 1429 aa9.79□□□□□ -0.84
CTDNEP1-204ENST00000570484 DIP2CQ9Y2E4 1556 aa9.79□□□□□ -0.84
CTDNEP1-204ENST00000570484 ABCA6Q8N139 1617 aa9.78□□□□□ -0.84
CTDNEP1-204ENST00000570484 RAB3GAP2Q9H2M9 1393 aa9.78□□□□□ -0.84
CTDNEP1-204ENST00000570484 FBXO3Q9UK99 471 aa9.78□□□□□ -0.84
CTDNEP1-204ENST00000570484 A2MP01023 1474 aa9.78□□□□□ -0.84
CTDNEP1-204ENST00000570484 COL17A1Q9UMD9 1497 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-204ENST00000570484 YEATS2Q9ULM3 1422 aa9.77□□□□□ -0.85
CTDNEP1-204ENST00000570484 KIDINS220Q9ULH0 1771 aa9.77□□□□□ -0.85
CTDNEP1-204ENST00000570484 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-204ENST00000570484 EIF2AK4Q9P2K8 1649 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-204ENST00000570484 ATP10AO60312 1499 aa9.75□□□□□ -0.85
CTDNEP1-204ENST00000570484 DHX29Q7Z478 1369 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-204ENST00000570484 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
CTDNEP1-204ENST00000570484 REREQ9P2R6 1566 aa9.74□□□□□ -0.85
CTDNEP1-204ENST00000570484 TRIM52Q96A61 297 aa9.73□□□□□ -0.85
CTDNEP1-204ENST00000570484 KANK1Q14678 1352 aa9.73□□□□□ -0.85
CTDNEP1-204ENST00000570484 UNC13BO14795 1591 aa9.71□□□□□ -0.85
CTDNEP1-204ENST00000570484 KIF3BO15066 747 aa9.71□□□□□ -0.86
CTDNEP1-204ENST00000570484 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-204ENST00000570484 AGLP35573 1532 aa9.71□□□□□ -0.86
CTDNEP1-204ENST00000570484 PRDM15P57071 1507 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-204ENST00000570484 HRCP23327 699 aa9.7□□□□□ -0.86
CTDNEP1-204ENST00000570484 RNF17Q9BXT8 1623 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-204ENST00000570484 DEPDC5O75140 1603 aa9.69□□□□□ -0.86
CTDNEP1-204ENST00000570484 NUP155O75694 1391 aa9.69□□□□□ -0.86
CTDNEP1-204ENST00000570484 KDM5DQ9BY66 1539 aa9.69□□□□□ -0.86
CTDNEP1-204ENST00000570484 FAM135AQ9P2D6 1515 aa9.68□□□□□ -0.86
CTDNEP1-204ENST00000570484 BCORL1Q5H9F3 1711 aa9.68□□□□□ -0.86
CTDNEP1-204ENST00000570484 GGT6Q6P531 493 aa9.67□□□□□ -0.86
CTDNEP1-204ENST00000570484 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-204ENST00000570484 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-204ENST00000570484 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
CTDNEP1-204ENST00000570484 STAG3Q9UJ98 1225 aa9.66□□□□□ -0.86
CTDNEP1-204ENST00000570484 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-204ENST00000570484 MROH1Q8NDA8 1641 aa9.66□□□□□ -0.86
CTDNEP1-204ENST00000570484 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-204ENST00000570484 MLECQ14165 292 aa9.65□□□□□ -0.86
CTDNEP1-204ENST00000570484 PZPP20742 1482 aa9.65□□□□□ -0.87
CTDNEP1-204ENST00000570484 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
CTDNEP1-204ENST00000570484 ABCC3O15438 1527 aa9.64□□□□□ -0.87
CTDNEP1-204ENST00000570484 VWDEQ8N2E2 1590 aa9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 EFCAB6Q5THR3 1501 aa9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 TET3O43151 1660 aa9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
CTDNEP1-204ENST00000570484 MPHOSPH9Q99550 1183 aa9.62□□□□□ -0.87
CTDNEP1-204ENST00000570484 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
CTDNEP1-204ENST00000570484 CAMSAP1Q5T5Y3 1602 aa9.61□□□□□ -0.87
CTDNEP1-204ENST00000570484 PKD2Q13563 968 aa9.61□□□□□ -0.87
CTDNEP1-204ENST00000570484 RPRD2Q5VT52 1461 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-204ENST00000570484 CLSPNQ9HAW4 1339 aa9.6□□□□□ -0.87
CTDNEP1-204ENST00000570484 CEP152O94986 1710 aa9.6□□□□□ -0.87
CTDNEP1-204ENST00000570484 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-204ENST00000570484 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-204ENST00000570484 FER1L4A9Z1Z3 1794 aa9.58□□□□□ -0.88
CTDNEP1-204ENST00000570484 CCDC144AA2RUR9 1427 aa9.57□□□□□ -0.88
CTDNEP1-204ENST00000570484 NPATQ14207 1427 aa9.57□□□□□ -0.88
CTDNEP1-204ENST00000570484 ARHGAP31Q2M1Z3 1444 aa9.57□□□□□ -0.88
CTDNEP1-204ENST00000570484 TRPM2O94759 1503 aa9.56□□□□□ -0.88
CTDNEP1-204ENST00000570484 MADDQ8WXG6 1647 aa9.56□□□□□ -0.88
CTDNEP1-204ENST00000570484 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
CTDNEP1-204ENST00000570484 E9PCH4 1651 aa9.56□□□□□ -0.88
CTDNEP1-204ENST00000570484 ERVK-7P63135 1459 aa9.55□□□□□ -0.88
CTDNEP1-204ENST00000570484 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms