RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TPRNQ4KMQ1 711 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 EFCAB2Q5VUJ9 269 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 KCNH8Q96L42 1107 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 ABCA9Q8IUA7 1624 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 ARAP3Q8WWN8 1544 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 CDC42BPBQ9Y5S2 1711 aa7.61□□□□□ -1.19
SF3B3-213ENST00000569687 ADGBQ8N7X0 1667 aa7.61□□□□□ -1.19
SF3B3-213ENST00000569687 SAMD9LQ8IVG5 1584 aa7.61□□□□□ -1.19
SF3B3-213ENST00000569687 ARHGAP5Q13017 1502 aa7.61□□□□□ -1.19
SF3B3-213ENST00000569687 CCDC141Q6ZP82 1450 aa7.61□□□□□ -1.19
SF3B3-213ENST00000569687 CROCC2H7BZ55 1655 aa7.6□□□□□ -1.19
SF3B3-213ENST00000569687 DDX10Q13206 875 aaKnown RBP7.6□□□□□ -1.19
SF3B3-213ENST00000569687 BBXQ8WY36 941 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-213ENST00000569687 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-213ENST00000569687 KDM5DQ9BY66 1539 aa7.6□□□□□ -1.19
SF3B3-213ENST00000569687 NUP155O75694 1391 aa7.59□□□□□ -1.19
SF3B3-213ENST00000569687 KIF15Q9NS87 1388 aa7.59□□□□□ -1.19
SF3B3-213ENST00000569687 MAST1Q9Y2H9 1570 aa7.59□□□□□ -1.19
SF3B3-213ENST00000569687 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
SF3B3-213ENST00000569687 EIF4G2P78344 907 aaKnown RBP eCLIP7.58□□□□□ -1.2
SF3B3-213ENST00000569687 NBPF8Q3BBV2 869 aa7.58□□□□□ -1.2
SF3B3-213ENST00000569687 PAXIP1Q6ZW49 1069 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-213ENST00000569687 ABCC1P33527 1531 aa7.57□□□□□ -1.2
SF3B3-213ENST00000569687 SYCP2Q9BX26 1530 aa7.57□□□□□ -1.2
SF3B3-213ENST00000569687 TEX14Q8IWB6 1497 aa7.57□□□□□ -1.2
SF3B3-213ENST00000569687 HSPA5P11021 654 aaKnown RBP7.57□□□□□ -1.2
SF3B3-213ENST00000569687 GLI2P10070 1586 aa7.56□□□□□ -1.2
SF3B3-213ENST00000569687 RTEL1-TNFRSF6BF6WH68 1400 aa7.56□□□□□ -1.2
SF3B3-213ENST00000569687 SPATA31E1Q6ZUB1 1445 aa7.56□□□□□ -1.2
SF3B3-213ENST00000569687 FANCAO15360 1455 aa7.55□□□□□ -1.2
SF3B3-213ENST00000569687 CFAP74Q9C0B2 1584 aa7.55□□□□□ -1.2
SF3B3-213ENST00000569687 UHRF1BP1Q6BDS2 1440 aa7.55□□□□□ -1.2
SF3B3-213ENST00000569687 CD109Q6YHK3 1445 aa7.55□□□□□ -1.2
SF3B3-213ENST00000569687 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
SF3B3-213ENST00000569687 HIRIP3Q9BW71 556 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-213ENST00000569687 ARHGEF12Q9NZN5 1544 aa7.55□□□□□ -1.2
SF3B3-213ENST00000569687 DIP2BQ9P265 1576 aa7.54□□□□□ -1.2
SF3B3-213ENST00000569687 MAP3K4Q9Y6R4 1608 aa7.54□□□□□ -1.2
SF3B3-213ENST00000569687 ANP32CO43423 234 aa7.54□□□□□ -1.2
SF3B3-213ENST00000569687 ECM2O94769 699 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-213ENST00000569687 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
SF3B3-213ENST00000569687 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 DUOX2Q9NRD8 1548 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 POLA2Q14181 598 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 KLHL34Q8N239 644 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 YTHDC1Q96MU7 727 aaKnown RBP7.53□□□□□ -1.2
SF3B3-213ENST00000569687 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 ATP10AO60312 1499 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 PLXNC1O60486 1568 aa7.53□□□□□ -1.2
SF3B3-213ENST00000569687 ARID4BQ4LE39 1312 aaPredicted RBP7.52□□□□□ -1.2
SF3B3-213ENST00000569687 ERBINQ96RT1 1412 aa7.52□□□□□ -1.2
SF3B3-213ENST00000569687 ADGRL1O94910 1474 aa7.52□□□□□ -1.21
SF3B3-213ENST00000569687 NEO1Q92859 1461 aa7.52□□□□□ -1.21
SF3B3-213ENST00000569687 TRHP20396 242 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-213ENST00000569687 TRAPPC8Q9Y2L5 1435 aa7.52□□□□□ -1.21
SF3B3-213ENST00000569687 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
SF3B3-213ENST00000569687 CCDC7Q96M83 1385 aa7.51□□□□□ -1.21
SF3B3-213ENST00000569687 C11orf95C9JLR9 678 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-213ENST00000569687 STAC3Q96MF2 364 aa7.51□□□□□ -1.21
SF3B3-213ENST00000569687 FAM135AQ9P2D6 1515 aa7.51□□□□□ -1.21
SF3B3-213ENST00000569687 SCAPERQ9BY12 1400 aa7.51□□□□□ -1.21
SF3B3-213ENST00000569687 UNC13BO14795 1591 aa7.5□□□□□ -1.21
SF3B3-213ENST00000569687 PLA2R1Q13018 1463 aa7.5□□□□□ -1.21
SF3B3-213ENST00000569687 MAGI2Q86UL8 1455 aa7.5□□□□□ -1.21
SF3B3-213ENST00000569687 FAM69CQ0P6D2 419 aa7.5□□□□□ -1.21
SF3B3-213ENST00000569687 AFAP1Q8N556 730 aa7.5□□□□□ -1.21
SF3B3-213ENST00000569687 ZFYVE16Q7Z3T8 1539 aa7.5□□□□□ -1.21
SF3B3-213ENST00000569687 ZNF518AQ6AHZ1 1483 aa7.49□□□□□ -1.21
SF3B3-213ENST00000569687 DNAJC5Q9H3Z4 198 aa7.49□□□□□ -1.21
SF3B3-213ENST00000569687 SPINK5Q9NQ38 1064 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-213ENST00000569687 TSHZ2Q9NRE2 1034 aa7.49□□□□□ -1.21
SF3B3-213ENST00000569687 POGZQ7Z3K3 1410 aa7.49□□□□□ -1.21
SF3B3-213ENST00000569687 INO80Q9ULG1 1556 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-213ENST00000569687 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
SF3B3-213ENST00000569687 RGL2O15211 777 aa7.48□□□□□ -1.21
SF3B3-213ENST00000569687 KDM5CP41229 1560 aa7.48□□□□□ -1.21
SF3B3-213ENST00000569687 IQGAP3Q86VI3 1631 aa7.48□□□□□ -1.21
SF3B3-213ENST00000569687 KIF13AQ9H1H9 1805 aa7.48□□□□□ -1.21
SF3B3-213ENST00000569687 ATP7AQ04656 1500 aa7.47□□□□□ -1.21
SF3B3-213ENST00000569687 DHX29Q7Z478 1369 aaKnown RBP7.47□□□□□ -1.21
SF3B3-213ENST00000569687 SPRYD3Q8NCJ5 442 aa7.47□□□□□ -1.21
SF3B3-213ENST00000569687 DCAF11Q8TEB1 546 aa7.47□□□□□ -1.21
SF3B3-213ENST00000569687 RALGAPBQ86X10 1494 aa7.47□□□□□ -1.21
SF3B3-213ENST00000569687 KIF7Q2M1P5 1343 aa7.47□□□□□ -1.21
SF3B3-213ENST00000569687 CCDC144AA2RUR9 1427 aa7.46□□□□□ -1.21
SF3B3-213ENST00000569687 PTPRTO14522 1441 aa7.46□□□□□ -1.21
SF3B3-213ENST00000569687 CNTLNQ9NXG0 1405 aa7.46□□□□□ -1.21
SF3B3-213ENST00000569687 HECW2Q9P2P5 1572 aa7.46□□□□□ -1.22
SF3B3-213ENST00000569687 GPRASP1Q5JY77 1395 aa7.46□□□□□ -1.22
SF3B3-213ENST00000569687 USP47Q96K76 1375 aa7.46□□□□□ -1.22
SF3B3-213ENST00000569687 MLH3Q9UHC1 1453 aa7.45□□□□□ -1.22
SF3B3-213ENST00000569687 RICTORQ6R327 1708 aa7.45□□□□□ -1.22
SF3B3-213ENST00000569687 CARD11Q9BXL7 1154 aa7.45□□□□□ -1.22
SF3B3-213ENST00000569687 PRKRIP1Q9H875 184 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-213ENST00000569687 KIDINS220Q9ULH0 1771 aa7.45□□□□□ -1.22
SF3B3-213ENST00000569687 FRMPD1Q5SYB0 1578 aa7.45□□□□□ -1.22
SF3B3-213ENST00000569687 ROCK2O75116 1388 aaKnown RBP7.45□□□□□ -1.22
SF3B3-213ENST00000569687 KANK1Q14678 1352 aa7.44□□□□□ -1.22
SF3B3-213ENST00000569687 PRAG1Q86YV5 1406 aa7.44□□□□□ -1.22
SF3B3-213ENST00000569687 TSPOAP1O95153 1857 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms