RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 07e-6■■■□□ 17
TCF4-243ENST00000569357 A2ML1A8K2U0 1454 aa15.05■□□□□ -0
TCF4-243ENST00000569357 PREX2Q70Z35 1606 aa15.05■□□□□ -0
TCF4-243ENST00000569357 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
TCF4-243ENST00000569357 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
TCF4-243ENST00000569357 RGS17Q9UGC6 210 aaPredicted RBP15.04■□□□□ -0
TCF4-243ENST00000569357 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
TCF4-243ENST00000569357 DNMT1P26358 1616 aaKnown RBP15.02□□□□□ -0.01
TCF4-243ENST00000569357 A2MP01023 1474 aa15.01□□□□□ -0.01
TCF4-243ENST00000569357 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
TCF4-243ENST00000569357 SYCP2Q9BX26 1530 aa15.01□□□□□ -0.01
TCF4-243ENST00000569357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15□□□□□ -0.01
TCF4-243ENST00000569357 TNRQ92752 1358 aa14.99□□□□□ -0.01
TCF4-243ENST00000569357 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
TCF4-243ENST00000569357 NEURL4Q96JN8 1562 aa14.98□□□□□ -0.01
TCF4-243ENST00000569357 THEMISQ8N1K5 641 aaPredicted RBP14.98□□□□□ -0.01
TCF4-243ENST00000569357 ALKQ9UM73 1620 aa14.97□□□□□ -0.01
TCF4-243ENST00000569357 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
TCF4-243ENST00000569357 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
TCF4-243ENST00000569357 POTEAQ6S8J7 498 aa14.96□□□□□ -0.01
TCF4-243ENST00000569357 CFDP1Q9UEE9 299 aaPredicted RBP14.96□□□□□ -0.01
TCF4-243ENST00000569357 CDC42BPAQ5VT25 1732 aa14.95□□□□□ -0.02
TCF4-243ENST00000569357 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
TCF4-243ENST00000569357 VWDEQ8N2E2 1590 aa14.95□□□□□ -0.02
TCF4-243ENST00000569357 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
TCF4-243ENST00000569357 CCDC18Q5T9S5 1454 aa14.93□□□□□ -0.02
TCF4-243ENST00000569357 KIF3BO15066 747 aa14.92□□□□□ -0.02
TCF4-243ENST00000569357 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
TCF4-243ENST00000569357 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
TCF4-243ENST00000569357 INO80Q9ULG1 1556 aaPredicted RBP14.91□□□□□ -0.02
TCF4-243ENST00000569357 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
TCF4-243ENST00000569357 WASHC2CQ9Y4E1 1318 aa14.91□□□□□ -0.02
TCF4-243ENST00000569357 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
TCF4-243ENST00000569357 CASKIN1Q8WXD9 1431 aa14.9□□□□□ -0.02
TCF4-243ENST00000569357 PLEKHH2Q8IVE3 1493 aa14.89□□□□□ -0.03
TCF4-243ENST00000569357 UGGT1Q9NYU2 1555 aa14.89□□□□□ -0.03
TCF4-243ENST00000569357 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
TCF4-243ENST00000569357 MIA2Q96PC5 1412 aa14.88□□□□□ -0.03
TCF4-243ENST00000569357 MED14O60244 1454 aa14.88□□□□□ -0.03
TCF4-243ENST00000569357 PZPP20742 1482 aa14.88□□□□□ -0.03
TCF4-243ENST00000569357 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
TCF4-243ENST00000569357 ABCB7O75027 752 aa14.87□□□□□ -0.03
TCF4-243ENST00000569357 ZNF644Q9H582 1327 aaPredicted RBP14.87□□□□□ -0.03
TCF4-243ENST00000569357 DHX29Q7Z478 1369 aaKnown RBP14.85□□□□□ -0.03
TCF4-243ENST00000569357 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
TCF4-243ENST00000569357 ADGBQ8N7X0 1667 aa14.85□□□□□ -0.03
TCF4-243ENST00000569357 NLRP1Q9C000 1473 aa14.85□□□□□ -0.03
TCF4-243ENST00000569357 DEPDC5O75140 1603 aa14.84□□□□□ -0.03
TCF4-243ENST00000569357 STRCP1A6NGW2 1772 aa14.83□□□□□ -0.03
TCF4-243ENST00000569357 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
TCF4-243ENST00000569357 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
TCF4-243ENST00000569357 SYNMO15061 1565 aa14.81□□□□□ -0.04
TCF4-243ENST00000569357 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
TCF4-243ENST00000569357 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
TCF4-243ENST00000569357 FAM135BQ49AJ0 1406 aa14.78□□□□□ -0.04
TCF4-243ENST00000569357 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
TCF4-243ENST00000569357 TXNDC2Q86VQ3 553 aa14.78□□□□□ -0.04
TCF4-243ENST00000569357 FYCO1Q9BQS8 1478 aa14.77□□□□□ -0.04
TCF4-243ENST00000569357 UPF1Q92900 1129 aaKnown RBP eCLIP14.77□□□□□ -0.05
TCF4-243ENST00000569357 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
TCF4-243ENST00000569357 MBD5Q9P267 1494 aa14.76□□□□□ -0.05
TCF4-243ENST00000569357 LTKP29376 864 aa14.75□□□□□ -0.05
TCF4-243ENST00000569357 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
TCF4-243ENST00000569357 SCAF11Q99590 1463 aaKnown RBP14.74□□□□□ -0.05
TCF4-243ENST00000569357 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
TCF4-243ENST00000569357 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
TCF4-243ENST00000569357 MEX3CQ5U5Q3 659 aaKnown RBP14.72□□□□□ -0.05
TCF4-243ENST00000569357 PROSER2Q86WR7 435 aaPredicted RBP14.72□□□□□ -0.05
TCF4-243ENST00000569357 ZC3H13Q5T200 1668 aaKnown RBP14.71□□□□□ -0.06
TCF4-243ENST00000569357 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
TCF4-243ENST00000569357 CCDC141Q6ZP82 1450 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 ROBO1Q9Y6N7 1651 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 JCADQ9P266 1359 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 ERVK-7P63135 1459 aa14.69□□□□□ -0.06
TCF4-243ENST00000569357 RSPH4AQ5TD94 716 aa14.68□□□□□ -0.06
TCF4-243ENST00000569357 ZNF772Q68DY9 489 aaPredicted RBP14.68□□□□□ -0.06
TCF4-243ENST00000569357 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
TCF4-243ENST00000569357 XIRP1Q702N8 1843 aaKnown RBP14.67□□□□□ -0.06
TCF4-243ENST00000569357 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
TCF4-243ENST00000569357 KCNA6P17658 529 aa14.66□□□□□ -0.06
TCF4-243ENST00000569357 SLC26A8Q96RN1 970 aa14.66□□□□□ -0.06
TCF4-243ENST00000569357 ABCC3O15438 1527 aa14.66□□□□□ -0.06
TCF4-243ENST00000569357 BCANQ96GW7 911 aa14.65□□□□□ -0.06
TCF4-243ENST00000569357 SLAIN2Q9P270 581 aa14.65□□□□□ -0.06
TCF4-243ENST00000569357 UBR1Q8IWV7 1749 aa14.64□□□□□ -0.07
TCF4-243ENST00000569357 RXRBP28702 533 aa14.64□□□□□ -0.07
TCF4-243ENST00000569357 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
TCF4-243ENST00000569357 MSH6P52701 1360 aa14.63□□□□□ -0.07
TCF4-243ENST00000569357 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
TCF4-243ENST00000569357 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
TCF4-243ENST00000569357 SLIT1O75093 1534 aa14.62□□□□□ -0.07
TCF4-243ENST00000569357 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
TCF4-243ENST00000569357 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
TCF4-243ENST00000569357 TMEM2Q9UHN6 1383 aa14.6□□□□□ -0.07
TCF4-243ENST00000569357 CFAP65Q6ZU64 1925 aaKnown RBP14.6□□□□□ -0.07
TCF4-243ENST00000569357 MAP3K1Q13233 1512 aa14.6□□□□□ -0.07
TCF4-243ENST00000569357 SPATA31A6Q5VVP1 1343 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms