RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 ZNF335Q9H4Z2 1342 aaPredicted RBP24.51■■□□□ 1.51
SCAMP2-210ENST00000569124 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
SCAMP2-210ENST00000569124 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
SCAMP2-210ENST00000569124 ARHGEF5Q12774 1597 aa24.5■■□□□ 1.51
SCAMP2-210ENST00000569124 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
SCAMP2-210ENST00000569124 NEURL4Q96JN8 1562 aa24.46■■□□□ 1.51
SCAMP2-210ENST00000569124 PZPP20742 1482 aa24.46■■□□□ 1.51
SCAMP2-210ENST00000569124 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
SCAMP2-210ENST00000569124 RNF17Q9BXT8 1623 aaKnown RBP24.43■■□□□ 1.5
SCAMP2-210ENST00000569124 TNRQ92752 1358 aa24.42■■□□□ 1.5
SCAMP2-210ENST00000569124 CFAP65Q6ZU64 1925 aaKnown RBP24.42■■□□□ 1.5
SCAMP2-210ENST00000569124 KIF3BO15066 747 aa24.41■■□□□ 1.5
SCAMP2-210ENST00000569124 EIF2AK4Q9P2K8 1649 aaKnown RBP24.4■■□□□ 1.5
SCAMP2-210ENST00000569124 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
SCAMP2-210ENST00000569124 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
SCAMP2-210ENST00000569124 RSPH4AQ5TD94 716 aa24.39■■□□□ 1.49
SCAMP2-210ENST00000569124 CPS1P31327 1500 aa24.39■■□□□ 1.49
SCAMP2-210ENST00000569124 CEP152O94986 1710 aa24.38■■□□□ 1.49
SCAMP2-210ENST00000569124 SOCS7O14512 581 aa24.38■■□□□ 1.49
SCAMP2-210ENST00000569124 DEPDC5O75140 1603 aa24.38■■□□□ 1.49
SCAMP2-210ENST00000569124 NLRP1Q9C000 1473 aa24.37■■□□□ 1.49
SCAMP2-210ENST00000569124 IQGAP1P46940 1657 aa24.37■■□□□ 1.49
SCAMP2-210ENST00000569124 UGGT1Q9NYU2 1555 aa24.36■■□□□ 1.49
SCAMP2-210ENST00000569124 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
SCAMP2-210ENST00000569124 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
SCAMP2-210ENST00000569124 FBXO31Q5XUX0 539 aaPredicted RBP24.33■■□□□ 1.49
SCAMP2-210ENST00000569124 ABCC3O15438 1527 aa24.31■■□□□ 1.48
SCAMP2-210ENST00000569124 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
SCAMP2-210ENST00000569124 VWDEQ8N2E2 1590 aa24.31■■□□□ 1.48
SCAMP2-210ENST00000569124 VPS8Q8N3P4 1428 aa24.31■■□□□ 1.48
SCAMP2-210ENST00000569124 SHANK2Q9UPX8 1470 aa24.31■■□□□ 1.48
SCAMP2-210ENST00000569124 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
SCAMP2-210ENST00000569124 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
SCAMP2-210ENST00000569124 MIA2Q96PC5 1412 aa24.29■■□□□ 1.48
SCAMP2-210ENST00000569124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
SCAMP2-210ENST00000569124 MROH1Q8NDA8 1641 aa24.28■■□□□ 1.48
SCAMP2-210ENST00000569124 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
SCAMP2-210ENST00000569124 STRCP1A6NGW2 1772 aa24.27■■□□□ 1.48
SCAMP2-210ENST00000569124 MED14O60244 1454 aa24.26■■□□□ 1.47
SCAMP2-210ENST00000569124 SYNMO15061 1565 aa24.26■■□□□ 1.47
SCAMP2-210ENST00000569124 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
SCAMP2-210ENST00000569124 THEMISQ8N1K5 641 aaPredicted RBP24.25■■□□□ 1.47
SCAMP2-210ENST00000569124 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
SCAMP2-210ENST00000569124 NPHP4O75161 1426 aaPredicted RBP24.25■■□□□ 1.47
SCAMP2-210ENST00000569124 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
SCAMP2-210ENST00000569124 MED1Q15648 1581 aaPredicted RBP24.24■■□□□ 1.47
SCAMP2-210ENST00000569124 ERVK-7P63135 1459 aa24.23■■□□□ 1.47
SCAMP2-210ENST00000569124 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
SCAMP2-210ENST00000569124 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
SCAMP2-210ENST00000569124 TOM1O60784 492 aa24.2■■□□□ 1.46
SCAMP2-210ENST00000569124 PIP4K2BP78356 416 aa24.18■■□□□ 1.46
SCAMP2-210ENST00000569124 PRDM15P57071 1507 aaPredicted RBP24.18■■□□□ 1.46
SCAMP2-210ENST00000569124 ALKQ9UM73 1620 aa24.16■■□□□ 1.46
SCAMP2-210ENST00000569124 PTPN23Q9H3S7 1636 aa24.15■■□□□ 1.46
SCAMP2-210ENST00000569124 HSPA1LP34931 641 aa24.14■■□□□ 1.45
SCAMP2-210ENST00000569124 XIRP1Q702N8 1843 aaKnown RBP24.13■■□□□ 1.45
SCAMP2-210ENST00000569124 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
SCAMP2-210ENST00000569124 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
SCAMP2-210ENST00000569124 SCAF11Q99590 1463 aaKnown RBP24.1■■□□□ 1.45
SCAMP2-210ENST00000569124 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
SCAMP2-210ENST00000569124 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
SCAMP2-210ENST00000569124 KDM5AP29375 1690 aaKnown RBP24.08■■□□□ 1.45
SCAMP2-210ENST00000569124 KIF15Q9NS87 1388 aa24.07■■□□□ 1.44
SCAMP2-210ENST00000569124 SLIT1O75093 1534 aa24.07■■□□□ 1.44
SCAMP2-210ENST00000569124 ARHGAP31Q2M1Z3 1444 aa24.05■■□□□ 1.44
SCAMP2-210ENST00000569124 ARHGAP23Q9P227 1491 aa24.05■■□□□ 1.44
SCAMP2-210ENST00000569124 ABCC5O15440 1437 aa24.01■■□□□ 1.43
SCAMP2-210ENST00000569124 DAPK1P53355 1430 aa24.01■■□□□ 1.43
SCAMP2-210ENST00000569124 APLP2Q06481 763 aa24■■□□□ 1.43
SCAMP2-210ENST00000569124 KANK1Q14678 1352 aa23.98■■□□□ 1.43
SCAMP2-210ENST00000569124 EFCAB6Q5THR3 1501 aa23.97■■□□□ 1.43
SCAMP2-210ENST00000569124 MYO5BQ9ULV0 1848 aa23.97■■□□□ 1.43
SCAMP2-210ENST00000569124 FGD6Q6ZV73 1430 aa23.96■■□□□ 1.43
SCAMP2-210ENST00000569124 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
SCAMP2-210ENST00000569124 RRP7BPQ9NSQ0 103 aa23.96■■□□□ 1.43
SCAMP2-210ENST00000569124 LMTK2Q8IWU2 1503 aa23.95■■□□□ 1.43
SCAMP2-210ENST00000569124 TXNDC2Q86VQ3 553 aa23.93■■□□□ 1.42
SCAMP2-210ENST00000569124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.42
SCAMP2-210ENST00000569124 EID1Q9Y6B2 187 aa23.93■■□□□ 1.42
SCAMP2-210ENST00000569124 LTKP29376 864 aa23.92■■□□□ 1.42
SCAMP2-210ENST00000569124 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
SCAMP2-210ENST00000569124 ADGRB3O60242 1522 aa23.91■■□□□ 1.42
SCAMP2-210ENST00000569124 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
SCAMP2-210ENST00000569124 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
SCAMP2-210ENST00000569124 STAG3Q9UJ98 1225 aa23.9■■□□□ 1.42
SCAMP2-210ENST00000569124 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.41
SCAMP2-210ENST00000569124 ROBO1Q9Y6N7 1651 aa23.86■■□□□ 1.41
SCAMP2-210ENST00000569124 NWD1Q149M9 1564 aa23.86■■□□□ 1.41
SCAMP2-210ENST00000569124 TET3O43151 1660 aa23.86■■□□□ 1.41
SCAMP2-210ENST00000569124 ADGRL2O95490 1459 aa23.84■■□□□ 1.41
SCAMP2-210ENST00000569124 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.41
SCAMP2-210ENST00000569124 CHD2O14647 1828 aaKnown RBP23.82■■□□□ 1.4
SCAMP2-210ENST00000569124 NOS1P29475 1434 aa23.82■■□□□ 1.4
SCAMP2-210ENST00000569124 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
SCAMP2-210ENST00000569124 IDI1Q13907 227 aa23.79■■□□□ 1.4
SCAMP2-210ENST00000569124 RPRD2Q5VT52 1461 aaKnown RBP23.79■■□□□ 1.4
SCAMP2-210ENST00000569124 TMEM94Q12767 1356 aa23.78■■□□□ 1.4
SCAMP2-210ENST00000569124 UNC13BO14795 1591 aa23.77■■□□□ 1.4
SCAMP2-210ENST00000569124 FAM135BQ49AJ0 1406 aa23.76■■□□□ 1.39
SCAMP2-210ENST00000569124 PHLPP1O60346 1717 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms