RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 FAM135AQ9P2D6 1515 aa21.64■■□□□ 1.05
CNOT1-215ENST00000569020 MAP3K1Q13233 1512 aa21.63■■□□□ 1.05
CNOT1-215ENST00000569020 KDM5DQ9BY66 1539 aa21.63■■□□□ 1.05
CNOT1-215ENST00000569020 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
CNOT1-215ENST00000569020 PKD2Q13563 968 aa21.61■■□□□ 1.05
CNOT1-215ENST00000569020 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
CNOT1-215ENST00000569020 IQSEC2Q5JU85 1478 aa21.59■■□□□ 1.05
CNOT1-215ENST00000569020 DNMT1P26358 1616 aaKnown RBP21.59■■□□□ 1.05
CNOT1-215ENST00000569020 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.05
CNOT1-215ENST00000569020 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.05
CNOT1-215ENST00000569020 MAST1Q9Y2H9 1570 aa21.58■■□□□ 1.05
CNOT1-215ENST00000569020 PZPP20742 1482 aa21.58■■□□□ 1.04
CNOT1-215ENST00000569020 KANK4Q5T7N3 995 aaPredicted RBP21.56■■□□□ 1.04
CNOT1-215ENST00000569020 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
CNOT1-215ENST00000569020 POLR1AO95602 1720 aaPredicted RBP21.55■■□□□ 1.04
CNOT1-215ENST00000569020 TNRQ92752 1358 aa21.55■■□□□ 1.04
CNOT1-215ENST00000569020 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
CNOT1-215ENST00000569020 FBXO31Q5XUX0 539 aaPredicted RBP21.54■■□□□ 1.04
CNOT1-215ENST00000569020 EIF2AK4Q9P2K8 1649 aaKnown RBP21.54■■□□□ 1.04
CNOT1-215ENST00000569020 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
CNOT1-215ENST00000569020 RNF17Q9BXT8 1623 aaKnown RBP21.53■■□□□ 1.04
CNOT1-215ENST00000569020 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
CNOT1-215ENST00000569020 APLP2Q06481 763 aa21.49■■□□□ 1.03
CNOT1-215ENST00000569020 NLRP1Q9C000 1473 aa21.47■■□□□ 1.03
CNOT1-215ENST00000569020 CROCC2H7BZ55 1655 aa21.47■■□□□ 1.03
CNOT1-215ENST00000569020 UGGT1Q9NYU2 1555 aa21.46■■□□□ 1.03
CNOT1-215ENST00000569020 CEP152O94986 1710 aa21.46■■□□□ 1.03
CNOT1-215ENST00000569020 ABCC3O15438 1527 aa21.45■■□□□ 1.02
CNOT1-215ENST00000569020 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
CNOT1-215ENST00000569020 NEURL4Q96JN8 1562 aa21.44■■□□□ 1.02
CNOT1-215ENST00000569020 PTPN23Q9H3S7 1636 aa21.44■■□□□ 1.02
CNOT1-215ENST00000569020 THEMISQ8N1K5 641 aaPredicted RBP21.44■■□□□ 1.02
CNOT1-215ENST00000569020 MROH1Q8NDA8 1641 aa21.43■■□□□ 1.02
CNOT1-215ENST00000569020 CFAP65Q6ZU64 1925 aaKnown RBP21.43■■□□□ 1.02
CNOT1-215ENST00000569020 SPATA31D1Q6ZQQ2 1576 aa21.42■■□□□ 1.02
CNOT1-215ENST00000569020 ANKLE2Q86XL3 938 aa21.42■■□□□ 1.02
CNOT1-215ENST00000569020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.023e-6■□□□□ 9.8
CNOT1-215ENST00000569020 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
CNOT1-215ENST00000569020 DEPDC5O75140 1603 aa21.4■■□□□ 1.02
CNOT1-215ENST00000569020 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
CNOT1-215ENST00000569020 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
CNOT1-215ENST00000569020 CPS1P31327 1500 aa21.38■■□□□ 1.01
CNOT1-215ENST00000569020 ERVK-7P63135 1459 aa21.38■■□□□ 1.01
CNOT1-215ENST00000569020 ABCC5O15440 1437 aa21.38■■□□□ 1.01
CNOT1-215ENST00000569020 KIF15Q9NS87 1388 aa21.37■■□□□ 1.01
CNOT1-215ENST00000569020 ERBINQ96RT1 1412 aa21.37■■□□□ 1.01
CNOT1-215ENST00000569020 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
CNOT1-215ENST00000569020 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
CNOT1-215ENST00000569020 MED14O60244 1454 aa21.35■■□□□ 1.01
CNOT1-215ENST00000569020 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
CNOT1-215ENST00000569020 DAPK1P53355 1430 aa21.35■■□□□ 1.01
CNOT1-215ENST00000569020 FGD6Q6ZV73 1430 aa21.35■■□□□ 1.01
CNOT1-215ENST00000569020 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
CNOT1-215ENST00000569020 UBR1Q8IWV7 1749 aa21.33■■□□□ 1.01
CNOT1-215ENST00000569020 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
CNOT1-215ENST00000569020 ARHGAP31Q2M1Z3 1444 aa21.29■■□□□ 1
CNOT1-215ENST00000569020 KANK1Q14678 1352 aa21.28■■□□□ 1
CNOT1-215ENST00000569020 ANKRD30AQ9BXX3 1397 aa21.28■■□□□ 1
CNOT1-215ENST00000569020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 14e-8■□□□□ 10
CNOT1-215ENST00000569020 TOM1O60784 492 aa21.27■■□□□ 1
CNOT1-215ENST00000569020 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
CNOT1-215ENST00000569020 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
CNOT1-215ENST00000569020 STRCP1A6NGW2 1772 aa21.24■□□□□ 0.99
CNOT1-215ENST00000569020 ILDR2Q71H61 639 aa21.23■□□□□ 0.99
CNOT1-215ENST00000569020 PIK3C2BO00750 1634 aa21.22■□□□□ 0.99
CNOT1-215ENST00000569020 SCAF11Q99590 1463 aaKnown RBP21.22■□□□□ 0.99
CNOT1-215ENST00000569020 PIP4K2BP78356 416 aa21.22■□□□□ 0.99
CNOT1-215ENST00000569020 SLIT1O75093 1534 aa21.22■□□□□ 0.99
CNOT1-215ENST00000569020 SYNMO15061 1565 aa21.21■□□□□ 0.99
CNOT1-215ENST00000569020 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
CNOT1-215ENST00000569020 LMTK2Q8IWU2 1503 aa21.2■□□□□ 0.98
CNOT1-215ENST00000569020 KDM5AP29375 1690 aaKnown RBP21.2■□□□□ 0.98
CNOT1-215ENST00000569020 TXNDC2Q86VQ3 553 aa21.19■□□□□ 0.98
CNOT1-215ENST00000569020 ADGRL2O95490 1459 aa21.19■□□□□ 0.98
CNOT1-215ENST00000569020 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
CNOT1-215ENST00000569020 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
CNOT1-215ENST00000569020 EID1Q9Y6B2 187 aa21.18■□□□□ 0.98
CNOT1-215ENST00000569020 LRRC7Q96NW7 1537 aa21.17■□□□□ 0.98
CNOT1-215ENST00000569020 LTKP29376 864 aa21.16■□□□□ 0.98
CNOT1-215ENST00000569020 EFCAB6Q5THR3 1501 aa21.15■□□□□ 0.98
CNOT1-215ENST00000569020 HSPA1LP34931 641 aa21.15■□□□□ 0.98
CNOT1-215ENST00000569020 TMEM2Q9UHN6 1383 aa21.13■□□□□ 0.97
CNOT1-215ENST00000569020 SOCS7O14512 581 aa21.13■□□□□ 0.97
CNOT1-215ENST00000569020 ALKQ9UM73 1620 aa21.13■□□□□ 0.97
CNOT1-215ENST00000569020 FOXD1Q16676 465 aa21.12■□□□□ 0.97
CNOT1-215ENST00000569020 ANKRD50Q9ULJ7 1429 aa21.12■□□□□ 0.97
CNOT1-215ENST00000569020 IDI1Q13907 227 aa21.11■□□□□ 0.97
CNOT1-215ENST00000569020 NOS1P29475 1434 aa21.1■□□□□ 0.97
CNOT1-215ENST00000569020 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
CNOT1-215ENST00000569020 TET3O43151 1660 aa21.08■□□□□ 0.96
CNOT1-215ENST00000569020 ADGRB3O60242 1522 aa21.08■□□□□ 0.96
CNOT1-215ENST00000569020 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
CNOT1-215ENST00000569020 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
CNOT1-215ENST00000569020 MED1Q15648 1581 aaPredicted RBP21.06■□□□□ 0.96
CNOT1-215ENST00000569020 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
CNOT1-215ENST00000569020 MYO5BQ9ULV0 1848 aa21.04■□□□□ 0.96
CNOT1-215ENST00000569020 UNC13BO14795 1591 aa21.04■□□□□ 0.96
CNOT1-215ENST00000569020 ROCK1Q13464 1354 aa20.98■□□□□ 0.95
CNOT1-215ENST00000569020 KCNA6P17658 529 aa20.98■□□□□ 0.95
CNOT1-215ENST00000569020 BCANQ96GW7 911 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms