RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 DUOX2Q9NRD8 1548 aa27.12■■□□□ 1.93
EDC3-215ENST00000569007 FAM50AQ14320 339 aaKnown RBP27.12■■□□□ 1.93
EDC3-215ENST00000569007 WASHC2CQ9Y4E1 1318 aa27.12■■□□□ 1.93
EDC3-215ENST00000569007 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
EDC3-215ENST00000569007 RRP7BPQ9NSQ0 103 aa27.11■■□□□ 1.93
EDC3-215ENST00000569007 FAM135AQ9P2D6 1515 aa27.11■■□□□ 1.93
EDC3-215ENST00000569007 RNF17Q9BXT8 1623 aaKnown RBP27.09■■□□□ 1.93
EDC3-215ENST00000569007 EIF2AK4Q9P2K8 1649 aaKnown RBP27.09■■□□□ 1.93
EDC3-215ENST00000569007 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
EDC3-215ENST00000569007 CHIC2Q9UKJ5 165 aa27.09■■□□□ 1.93
EDC3-215ENST00000569007 ANKRD30AQ9BXX3 1397 aa27.05■■□□□ 1.92
EDC3-215ENST00000569007 ERBINQ96RT1 1412 aa27.03■■□□□ 1.92
EDC3-215ENST00000569007 MROH1Q8NDA8 1641 aa27.02■■□□□ 1.92
EDC3-215ENST00000569007 PZPP20742 1482 aa27.02■■□□□ 1.92
EDC3-215ENST00000569007 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
EDC3-215ENST00000569007 MYO3AQ8NEV4 1616 aa27.01■■□□□ 1.92
EDC3-215ENST00000569007 ABCC3O15438 1527 aa27.01■■□□□ 1.91
EDC3-215ENST00000569007 NCOA1Q15788 1441 aa27.01■■□□□ 1.91
EDC3-215ENST00000569007 STRCQ7RTU9 1775 aa27■■□□□ 1.91
EDC3-215ENST00000569007 ADGRL2O95490 1459 aa26.98■■□□□ 1.91
EDC3-215ENST00000569007 TNRQ92752 1358 aa26.97■■□□□ 1.91
EDC3-215ENST00000569007 ZC3H13Q5T200 1668 aaKnown RBP26.97■■□□□ 1.91
EDC3-215ENST00000569007 CEP170BQ9Y4F5 1589 aaPredicted RBP26.97■■□□□ 1.91
EDC3-215ENST00000569007 ZNF142P52746 1687 aaPredicted RBP26.96■■□□□ 1.91
EDC3-215ENST00000569007 DMRT2Q9Y5R5 561 aa26.95■■□□□ 1.9
EDC3-215ENST00000569007 PRDM15P57071 1507 aaPredicted RBP26.94■■□□□ 1.9
EDC3-215ENST00000569007 CAMSAP1Q5T5Y3 1602 aa26.94■■□□□ 1.9
EDC3-215ENST00000569007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.93■■□□□ 1.9
EDC3-215ENST00000569007 CEP152O94986 1710 aa26.92■■□□□ 1.9
EDC3-215ENST00000569007 A2ML1A8K2U0 1454 aa26.92■■□□□ 1.9
EDC3-215ENST00000569007 DEPDC5O75140 1603 aa26.9■■□□□ 1.9
EDC3-215ENST00000569007 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
EDC3-215ENST00000569007 KANK1Q14678 1352 aa26.87■■□□□ 1.89
EDC3-215ENST00000569007 PTPRTO14522 1441 aa26.87■■□□□ 1.89
EDC3-215ENST00000569007 ANKRD50Q9ULJ7 1429 aa26.86■■□□□ 1.89
EDC3-215ENST00000569007 NCKAP5LQ9HCH0 1330 aa26.86■■□□□ 1.89
EDC3-215ENST00000569007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.85■■□□□ 1.892e-11■□□□□ 9.6
EDC3-215ENST00000569007 ERVK-7P63135 1459 aa26.85■■□□□ 1.89
EDC3-215ENST00000569007 PLA2R1Q13018 1463 aa26.85■■□□□ 1.89
EDC3-215ENST00000569007 SPATA31D1Q6ZQQ2 1576 aa26.84■■□□□ 1.89
EDC3-215ENST00000569007 ITGAEP38570 1179 aa26.84■■□□□ 1.89
EDC3-215ENST00000569007 NLRP1Q9C000 1473 aa26.84■■□□□ 1.89
EDC3-215ENST00000569007 ROCK1Q13464 1354 aa26.82■■□□□ 1.88
EDC3-215ENST00000569007 ARHGAP31Q2M1Z3 1444 aa26.82■■□□□ 1.88
EDC3-215ENST00000569007 VWDEQ8N2E2 1590 aa26.8■■□□□ 1.88
EDC3-215ENST00000569007 PKD2Q13563 968 aa26.8■■□□□ 1.88
EDC3-215ENST00000569007 CFAP65Q6ZU64 1925 aaKnown RBP26.79■■□□□ 1.88
EDC3-215ENST00000569007 LMTK2Q8IWU2 1503 aa26.78■■□□□ 1.88
EDC3-215ENST00000569007 RRBP1Q9P2E9 1410 aaKnown RBP26.77■■□□□ 1.88
EDC3-215ENST00000569007 UGGT1Q9NYU2 1555 aa26.76■■□□□ 1.87
EDC3-215ENST00000569007 THEMISQ8N1K5 641 aaPredicted RBP26.76■■□□□ 1.87
EDC3-215ENST00000569007 CERKQ8TCT0 537 aa26.76■■□□□ 1.87
EDC3-215ENST00000569007 FBXO41Q8TF61 875 aa26.74■■□□□ 1.87
EDC3-215ENST00000569007 EFCAB6Q5THR3 1501 aa26.71■■□□□ 1.87
EDC3-215ENST00000569007 UNC13BO14795 1591 aa26.68■■□□□ 1.86
EDC3-215ENST00000569007 ANKLE2Q86XL3 938 aa26.68■■□□□ 1.86
EDC3-215ENST00000569007 POLR1AO95602 1720 aaPredicted RBP26.67■■□□□ 1.86
EDC3-215ENST00000569007 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
EDC3-215ENST00000569007 LTBP4Q8N2S1 1624 aa26.65■■□□□ 1.86
EDC3-215ENST00000569007 UBR1Q8IWV7 1749 aa26.64■■□□□ 1.85
EDC3-215ENST00000569007 ZNF335Q9H4Z2 1342 aaPredicted RBP26.64■■□□□ 1.85
EDC3-215ENST00000569007 NOS1P29475 1434 aa26.63■■□□□ 1.85
EDC3-215ENST00000569007 TET3O43151 1660 aa26.63■■□□□ 1.85
EDC3-215ENST00000569007 SYNMO15061 1565 aa26.62■■□□□ 1.85
EDC3-215ENST00000569007 RPRD2Q5VT52 1461 aaKnown RBP26.61■■□□□ 1.85
EDC3-215ENST00000569007 IDI1Q13907 227 aa26.6■■□□□ 1.85
EDC3-215ENST00000569007 PIK3C2BO00750 1634 aa26.6■■□□□ 1.85
EDC3-215ENST00000569007 NUP155O75694 1391 aa26.59■■□□□ 1.85
EDC3-215ENST00000569007 NPHP4O75161 1426 aaPredicted RBP26.58■■□□□ 1.85
EDC3-215ENST00000569007 MED14O60244 1454 aa26.58■■□□□ 1.85
EDC3-215ENST00000569007 IQGAP3Q86VI3 1631 aa26.57■■□□□ 1.84
EDC3-215ENST00000569007 STAG3Q9UJ98 1225 aa26.57■■□□□ 1.84
EDC3-215ENST00000569007 GCC2Q8IWJ2 1684 aa26.57■■□□□ 1.84
EDC3-215ENST00000569007 NAIPQ13075 1403 aa26.55■■□□□ 1.84
EDC3-215ENST00000569007 ARHGAP23Q9P227 1491 aa26.55■■□□□ 1.84
EDC3-215ENST00000569007 SLC52A1Q9NWF4 448 aa26.54■■□□□ 1.84
EDC3-215ENST00000569007 SLIT1O75093 1534 aa26.54■■□□□ 1.84
EDC3-215ENST00000569007 SCAF11Q99590 1463 aaKnown RBP26.53■■□□□ 1.84
EDC3-215ENST00000569007 LTKP29376 864 aa26.52■■□□□ 1.84
EDC3-215ENST00000569007 TXNDC2Q86VQ3 553 aa26.52■■□□□ 1.84
EDC3-215ENST00000569007 E9PCH4 1651 aa26.51■■□□□ 1.83
EDC3-215ENST00000569007 IQGAP1P46940 1657 aa26.51■■□□□ 1.83
EDC3-215ENST00000569007 TMEM2Q9UHN6 1383 aa26.51■■□□□ 1.83
EDC3-215ENST00000569007 KDM5AP29375 1690 aaKnown RBP26.5■■□□□ 1.83
EDC3-215ENST00000569007 EID1Q9Y6B2 187 aa26.49■■□□□ 1.83
EDC3-215ENST00000569007 ADGRB3O60242 1522 aa26.49■■□□□ 1.83
EDC3-215ENST00000569007 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
EDC3-215ENST00000569007 HFM1A2PYH4 1435 aa26.48■■□□□ 1.83
EDC3-215ENST00000569007 CPS1P31327 1500 aa26.41■■□□□ 1.82
EDC3-215ENST00000569007 TMEM131LA2VDJ0 1609 aa26.39■■□□□ 1.81
EDC3-215ENST00000569007 CHGAP10645 457 aaKnown RBP26.38■■□□□ 1.81
EDC3-215ENST00000569007 TRIM52Q96A61 297 aa26.37■■□□□ 1.81
EDC3-215ENST00000569007 MYO5BQ9ULV0 1848 aa26.36■■□□□ 1.81
EDC3-215ENST00000569007 ZFYVE9O95405 1425 aa26.34■■□□□ 1.81
EDC3-215ENST00000569007 RIMS2Q9UQ26 1411 aa26.33■■□□□ 1.81
EDC3-215ENST00000569007 UBAP1LF5GYI3 381 aa26.33■■□□□ 1.81
EDC3-215ENST00000569007 STRCP1A6NGW2 1772 aa26.33■■□□□ 1.8
EDC3-215ENST00000569007 SPHKAPQ2M3C7 1700 aa26.32■■□□□ 1.8
EDC3-215ENST00000569007 SLC26A8Q96RN1 970 aa26.31■■□□□ 1.8
EDC3-215ENST00000569007 PPP1R15AO75807 674 aaPredicted RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms