RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
TCF4-240ENST00000568673 UNC13BO14795 1591 aa13.29□□□□□ -0.28
TCF4-240ENST00000568673 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
TCF4-240ENST00000568673 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
TCF4-240ENST00000568673 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
TCF4-240ENST00000568673 DUOX2Q9NRD8 1548 aa13.27□□□□□ -0.28
TCF4-240ENST00000568673 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
TCF4-240ENST00000568673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
TCF4-240ENST00000568673 ROCK2O75116 1388 aaKnown RBP13.26□□□□□ -0.29
TCF4-240ENST00000568673 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
TCF4-240ENST00000568673 BCANQ96GW7 911 aa13.25□□□□□ -0.29
TCF4-240ENST00000568673 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
TCF4-240ENST00000568673 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
TCF4-240ENST00000568673 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
TCF4-240ENST00000568673 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
TCF4-240ENST00000568673 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
TCF4-240ENST00000568673 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
TCF4-240ENST00000568673 MAGI2Q86UL8 1455 aa13.23□□□□□ -0.29
TCF4-240ENST00000568673 ABCC1P33527 1531 aa13.23□□□□□ -0.29
TCF4-240ENST00000568673 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
TCF4-240ENST00000568673 ATP10AO60312 1499 aa13.22□□□□□ -0.29
TCF4-240ENST00000568673 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.29
TCF4-240ENST00000568673 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
TCF4-240ENST00000568673 RGL3Q3MIN7 710 aa13.21□□□□□ -0.3
TCF4-240ENST00000568673 ZBED9Q6R2W3 1325 aa13.2□□□□□ -0.3
TCF4-240ENST00000568673 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
TCF4-240ENST00000568673 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
TCF4-240ENST00000568673 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
TCF4-240ENST00000568673 A2MP01023 1474 aa13.19□□□□□ -0.3
TCF4-240ENST00000568673 SPAG9O60271 1321 aaKnown RBP13.18□□□□□ -0.3
TCF4-240ENST00000568673 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
TCF4-240ENST00000568673 AFAP1Q8N556 730 aa13.17□□□□□ -0.3
TCF4-240ENST00000568673 WDR7Q9Y4E6 1490 aa13.17□□□□□ -0.3
TCF4-240ENST00000568673 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
TCF4-240ENST00000568673 KTN1Q86UP2 1357 aaKnown RBP13.15□□□□□ -0.3
TCF4-240ENST00000568673 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
TCF4-240ENST00000568673 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
TCF4-240ENST00000568673 LAMC1P11047 1609 aa13.14□□□□□ -0.31
TCF4-240ENST00000568673 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
TCF4-240ENST00000568673 RALBP1Q15311 655 aa13.13□□□□□ -0.31
TCF4-240ENST00000568673 PNISRQ8TF01 805 aaKnown RBP13.13□□□□□ -0.31
TCF4-240ENST00000568673 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
TCF4-240ENST00000568673 FANCAO15360 1455 aa13.12□□□□□ -0.31
TCF4-240ENST00000568673 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
TCF4-240ENST00000568673 PRDM15P57071 1507 aaPredicted RBP13.12□□□□□ -0.31
TCF4-240ENST00000568673 ABCA9Q8IUA7 1624 aa13.12□□□□□ -0.31
TCF4-240ENST00000568673 E9PCH4 1651 aa13.11□□□□□ -0.31
TCF4-240ENST00000568673 TESK2Q96S53 571 aa13.1□□□□□ -0.31
TCF4-240ENST00000568673 DEPDC5O75140 1603 aa13.1□□□□□ -0.31
TCF4-240ENST00000568673 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
TCF4-240ENST00000568673 PTPRTO14522 1441 aa13.09□□□□□ -0.31
TCF4-240ENST00000568673 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
TCF4-240ENST00000568673 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
TCF4-240ENST00000568673 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
TCF4-240ENST00000568673 ASXL2Q76L83 1435 aa13.08□□□□□ -0.31
TCF4-240ENST00000568673 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.31
TCF4-240ENST00000568673 TRPM2O94759 1503 aa13.08□□□□□ -0.31
TCF4-240ENST00000568673 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
TCF4-240ENST00000568673 COL17A1Q9UMD9 1497 aaPredicted RBP13.08□□□□□ -0.32
TCF4-240ENST00000568673 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
TCF4-240ENST00000568673 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
TCF4-240ENST00000568673 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
TCF4-240ENST00000568673 KANK1Q14678 1352 aa13.07□□□□□ -0.32
TCF4-240ENST00000568673 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
TCF4-240ENST00000568673 SMG6Q86US8 1419 aaKnown RBP13.07□□□□□ -0.32
TCF4-240ENST00000568673 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
TCF4-240ENST00000568673 TMF1P82094 1093 aa13.06□□□□□ -0.32
TCF4-240ENST00000568673 DISP3Q9P2K9 1392 aa13.06□□□□□ -0.32
TCF4-240ENST00000568673 TET3O43151 1660 aa13.06□□□□□ -0.32
TCF4-240ENST00000568673 KIF3BO15066 747 aa13.06□□□□□ -0.32
TCF4-240ENST00000568673 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
TCF4-240ENST00000568673 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
TCF4-240ENST00000568673 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
TCF4-240ENST00000568673 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
TCF4-240ENST00000568673 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
TCF4-240ENST00000568673 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
TCF4-240ENST00000568673 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
TCF4-240ENST00000568673 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
TCF4-240ENST00000568673 CEP152O94986 1710 aa13.04□□□□□ -0.32
TCF4-240ENST00000568673 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
TCF4-240ENST00000568673 MADDQ8WXG6 1647 aa13.03□□□□□ -0.32
TCF4-240ENST00000568673 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
TCF4-240ENST00000568673 CLTCL1P53675 1640 aa13.02□□□□□ -0.33
TCF4-240ENST00000568673 PANK3Q9H999 370 aa13.02□□□□□ -0.33
TCF4-240ENST00000568673 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
TCF4-240ENST00000568673 ZNF518AQ6AHZ1 1483 aa13□□□□□ -0.33
TCF4-240ENST00000568673 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
TCF4-240ENST00000568673 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
TCF4-240ENST00000568673 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
TCF4-240ENST00000568673 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
TCF4-240ENST00000568673 KIDINS220Q9ULH0 1771 aa12.99□□□□□ -0.33
TCF4-240ENST00000568673 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
TCF4-240ENST00000568673 KCNA4P22459 653 aa12.99□□□□□ -0.33
TCF4-240ENST00000568673 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
TCF4-240ENST00000568673 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
TCF4-240ENST00000568673 CD109Q6YHK3 1445 aa12.96□□□□□ -0.33
TCF4-240ENST00000568673 EFCAB6Q5THR3 1501 aa12.96□□□□□ -0.34
TCF4-240ENST00000568673 LMTK2Q8IWU2 1503 aa12.95□□□□□ -0.34
TCF4-240ENST00000568673 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
TCF4-240ENST00000568673 INSRP06213 1382 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms