RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 FBXO31Q5XUX0 539 aaPredicted RBP23.33■■□□□ 1.33
CCNDBP1-213ENST00000568507 KDM5DQ9BY66 1539 aa23.32■■□□□ 1.32
CCNDBP1-213ENST00000568507 PKD2Q13563 968 aa23.31■■□□□ 1.32
CCNDBP1-213ENST00000568507 MAST1Q9Y2H9 1570 aa23.31■■□□□ 1.32
CCNDBP1-213ENST00000568507 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
CCNDBP1-213ENST00000568507 TNRQ92752 1358 aa23.29■■□□□ 1.32
CCNDBP1-213ENST00000568507 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
CCNDBP1-213ENST00000568507 CEP170BQ9Y4F5 1589 aaPredicted RBP23.29■■□□□ 1.32
CCNDBP1-213ENST00000568507 PZPP20742 1482 aa23.28■■□□□ 1.32
CCNDBP1-213ENST00000568507 A2ML1A8K2U0 1454 aa23.26■■□□□ 1.31
CCNDBP1-213ENST00000568507 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
CCNDBP1-213ENST00000568507 ABCC5O15440 1437 aa23.26■■□□□ 1.31
CCNDBP1-213ENST00000568507 PLA2R1Q13018 1463 aa23.25■■□□□ 1.31
CCNDBP1-213ENST00000568507 FGD6Q6ZV73 1430 aa23.24■■□□□ 1.31
CCNDBP1-213ENST00000568507 PTPN23Q9H3S7 1636 aa23.24■■□□□ 1.31
CCNDBP1-213ENST00000568507 ZNF142P52746 1687 aaPredicted RBP23.24■■□□□ 1.31
CCNDBP1-213ENST00000568507 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
CCNDBP1-213ENST00000568507 KIF15Q9NS87 1388 aa23.22■■□□□ 1.31
CCNDBP1-213ENST00000568507 THEMISQ8N1K5 641 aaPredicted RBP23.21■■□□□ 1.31
CCNDBP1-213ENST00000568507 DAPK1P53355 1430 aa23.21■■□□□ 1.31
CCNDBP1-213ENST00000568507 SHANK2Q9UPX8 1470 aa23.2■■□□□ 1.31
CCNDBP1-213ENST00000568507 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
CCNDBP1-213ENST00000568507 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
CCNDBP1-213ENST00000568507 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
CCNDBP1-213ENST00000568507 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
CCNDBP1-213ENST00000568507 ABCC3O15438 1527 aa23.18■■□□□ 1.3
CCNDBP1-213ENST00000568507 DNMT1P26358 1616 aaKnown RBP23.18■■□□□ 1.3
CCNDBP1-213ENST00000568507 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
CCNDBP1-213ENST00000568507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.17■■□□□ 1.35e-7■■□□□ 12.8
CCNDBP1-213ENST00000568507 NLRP1Q9C000 1473 aa23.16■■□□□ 1.3
CCNDBP1-213ENST00000568507 ZNF335Q9H4Z2 1342 aaPredicted RBP23.16■■□□□ 1.3
CCNDBP1-213ENST00000568507 ANKLE2Q86XL3 938 aa23.16■■□□□ 1.3
CCNDBP1-213ENST00000568507 LTBP4Q8N2S1 1624 aa23.16■■□□□ 1.3
CCNDBP1-213ENST00000568507 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
CCNDBP1-213ENST00000568507 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
CCNDBP1-213ENST00000568507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.29
CCNDBP1-213ENST00000568507 ZC3H13Q5T200 1668 aaKnown RBP23.13■■□□□ 1.29
CCNDBP1-213ENST00000568507 UGGT1Q9NYU2 1555 aa23.11■■□□□ 1.29
CCNDBP1-213ENST00000568507 KANK1Q14678 1352 aa23.11■■□□□ 1.29
CCNDBP1-213ENST00000568507 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
CCNDBP1-213ENST00000568507 MROH1Q8NDA8 1641 aa23.1■■□□□ 1.29
CCNDBP1-213ENST00000568507 IQSEC2Q5JU85 1478 aa23.09■■□□□ 1.29
CCNDBP1-213ENST00000568507 ERVK-7P63135 1459 aa23.08■■□□□ 1.29
CCNDBP1-213ENST00000568507 SPATA31D1Q6ZQQ2 1576 aa23.08■■□□□ 1.28
CCNDBP1-213ENST00000568507 PRDM15P57071 1507 aaPredicted RBP23.05■■□□□ 1.28
CCNDBP1-213ENST00000568507 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
CCNDBP1-213ENST00000568507 CEP152O94986 1710 aa23.04■■□□□ 1.28
CCNDBP1-213ENST00000568507 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
CCNDBP1-213ENST00000568507 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
CCNDBP1-213ENST00000568507 NEURL4Q96JN8 1562 aa23■■□□□ 1.27
CCNDBP1-213ENST00000568507 STAG3Q9UJ98 1225 aa23■■□□□ 1.27
CCNDBP1-213ENST00000568507 ADGRL2O95490 1459 aa23■■□□□ 1.27
CCNDBP1-213ENST00000568507 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
CCNDBP1-213ENST00000568507 MED14O60244 1454 aa22.98■■□□□ 1.27
CCNDBP1-213ENST00000568507 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
CCNDBP1-213ENST00000568507 PPARGC1BQ86YN6 1023 aaKnown RBP22.97■■□□□ 1.27
CCNDBP1-213ENST00000568507 ANKRD50Q9ULJ7 1429 aa22.96■■□□□ 1.27
CCNDBP1-213ENST00000568507 TXNDC2Q86VQ3 553 aa22.95■■□□□ 1.26
CCNDBP1-213ENST00000568507 EID1Q9Y6B2 187 aa22.95■■□□□ 1.26
CCNDBP1-213ENST00000568507 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
CCNDBP1-213ENST00000568507 LMTK2Q8IWU2 1503 aa22.94■■□□□ 1.26
CCNDBP1-213ENST00000568507 CPS1P31327 1500 aa22.93■■□□□ 1.26
CCNDBP1-213ENST00000568507 LTKP29376 864 aa22.91■■□□□ 1.26
CCNDBP1-213ENST00000568507 ITGAEP38570 1179 aa22.91■■□□□ 1.26
CCNDBP1-213ENST00000568507 IDI1Q13907 227 aa22.91■■□□□ 1.26
CCNDBP1-213ENST00000568507 VWDEQ8N2E2 1590 aa22.9■■□□□ 1.26
CCNDBP1-213ENST00000568507 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
CCNDBP1-213ENST00000568507 TOM1O60784 492 aa22.89■■□□□ 1.26
CCNDBP1-213ENST00000568507 UBR1Q8IWV7 1749 aa22.89■■□□□ 1.26
CCNDBP1-213ENST00000568507 SCAF1Q9H7N4 1312 aaKnown RBP22.89■■□□□ 1.25
CCNDBP1-213ENST00000568507 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
CCNDBP1-213ENST00000568507 SLC52A1Q9NWF4 448 aa22.88■■□□□ 1.25
CCNDBP1-213ENST00000568507 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
CCNDBP1-213ENST00000568507 TMEM2Q9UHN6 1383 aa22.86■■□□□ 1.25
CCNDBP1-213ENST00000568507 ARHGAP23Q9P227 1491 aa22.86■■□□□ 1.25
CCNDBP1-213ENST00000568507 PIP4K2BP78356 416 aa22.86■■□□□ 1.25
CCNDBP1-213ENST00000568507 SLIT1O75093 1534 aa22.85■■□□□ 1.25
CCNDBP1-213ENST00000568507 EFCAB6Q5THR3 1501 aa22.85■■□□□ 1.25
CCNDBP1-213ENST00000568507 DISP3Q9P2K9 1392 aa22.85■■□□□ 1.25
CCNDBP1-213ENST00000568507 NOS1P29475 1434 aa22.84■■□□□ 1.25
CCNDBP1-213ENST00000568507 PIK3C2BO00750 1634 aa22.83■■□□□ 1.25
CCNDBP1-213ENST00000568507 RPRD2Q5VT52 1461 aaKnown RBP22.81■■□□□ 1.24
CCNDBP1-213ENST00000568507 SYNMO15061 1565 aa22.79■■□□□ 1.24
CCNDBP1-213ENST00000568507 BCANQ96GW7 911 aa22.78■■□□□ 1.24
CCNDBP1-213ENST00000568507 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
CCNDBP1-213ENST00000568507 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
CCNDBP1-213ENST00000568507 NUP155O75694 1391 aa22.76■■□□□ 1.23
CCNDBP1-213ENST00000568507 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
CCNDBP1-213ENST00000568507 HSPA1LP34931 641 aa22.75■■□□□ 1.23
CCNDBP1-213ENST00000568507 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
CCNDBP1-213ENST00000568507 ADGRB3O60242 1522 aa22.74■■□□□ 1.23
CCNDBP1-213ENST00000568507 SLC26A8Q96RN1 970 aa22.74■■□□□ 1.23
CCNDBP1-213ENST00000568507 TET3O43151 1660 aa22.73■■□□□ 1.23
CCNDBP1-213ENST00000568507 UNC13BO14795 1591 aa22.73■■□□□ 1.23
CCNDBP1-213ENST00000568507 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
CCNDBP1-213ENST00000568507 KCNA6P17658 529 aa22.7■■□□□ 1.22
CCNDBP1-213ENST00000568507 STRCP1A6NGW2 1772 aa22.69■■□□□ 1.22
CCNDBP1-213ENST00000568507 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
CCNDBP1-213ENST00000568507 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.67■■□□□ 1.22
CCNDBP1-213ENST00000568507 GCC2Q8IWJ2 1684 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms