RNA–Protein interactions for RNA: ENST00000568365.1

SIRPB1-213, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SIRPB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-213ENST00000568365 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
SIRPB1-213ENST00000568365 KIF7Q2M1P5 1343 aa12.73□□□□□ -0.37
SIRPB1-213ENST00000568365 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
SIRPB1-213ENST00000568365 C11orf95C9JLR9 678 aaPredicted RBP12.72□□□□□ -0.37
SIRPB1-213ENST00000568365 ARID4BQ4LE39 1312 aaPredicted RBP12.71□□□□□ -0.37
SIRPB1-213ENST00000568365 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.37
SIRPB1-213ENST00000568365 NUDCQ9Y266 331 aa12.71□□□□□ -0.38
SIRPB1-213ENST00000568365 RNF123Q5XPI4 1314 aa12.7□□□□□ -0.38
SIRPB1-213ENST00000568365 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-213ENST00000568365 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
SIRPB1-213ENST00000568365 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
SIRPB1-213ENST00000568365 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
SIRPB1-213ENST00000568365 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
SIRPB1-213ENST00000568365 KDM5CP41229 1560 aa12.68□□□□□ -0.38
SIRPB1-213ENST00000568365 SPATA31D1Q6ZQQ2 1576 aa12.68□□□□□ -0.38
SIRPB1-213ENST00000568365 SAMD9LQ8IVG5 1584 aa12.68□□□□□ -0.38
SIRPB1-213ENST00000568365 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
SIRPB1-213ENST00000568365 BCORL1Q5H9F3 1711 aa12.68□□□□□ -0.38
SIRPB1-213ENST00000568365 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
SIRPB1-213ENST00000568365 RICTORQ6R327 1708 aa12.67□□□□□ -0.38
SIRPB1-213ENST00000568365 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
SIRPB1-213ENST00000568365 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
SIRPB1-213ENST00000568365 ABCC5O15440 1437 aa12.67□□□□□ -0.38
SIRPB1-213ENST00000568365 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
SIRPB1-213ENST00000568365 ABCC1P33527 1531 aa12.67□□□□□ -0.38
SIRPB1-213ENST00000568365 RAPGEF3O95398 923 aa12.66□□□□□ -0.38
SIRPB1-213ENST00000568365 CFDP1Q9UEE9 299 aaPredicted RBP12.66□□□□□ -0.38
SIRPB1-213ENST00000568365 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
SIRPB1-213ENST00000568365 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
SIRPB1-213ENST00000568365 CCDC136Q96JN2 1154 aa12.65□□□□□ -0.38
SIRPB1-213ENST00000568365 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
SIRPB1-213ENST00000568365 PZPP20742 1482 aa12.64□□□□□ -0.39
SIRPB1-213ENST00000568365 FOXD1Q16676 465 aa12.64□□□□□ -0.39
SIRPB1-213ENST00000568365 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
SIRPB1-213ENST00000568365 SYCP2Q9BX26 1530 aa12.64□□□□□ -0.39
SIRPB1-213ENST00000568365 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
SIRPB1-213ENST00000568365 ZNF644Q9H582 1327 aaPredicted RBP12.63□□□□□ -0.39
SIRPB1-213ENST00000568365 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
SIRPB1-213ENST00000568365 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
SIRPB1-213ENST00000568365 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SIRPB1-213ENST00000568365 E9PCH4 1651 aa12.62□□□□□ -0.39
SIRPB1-213ENST00000568365 ADGRL2O95490 1459 aa12.62□□□□□ -0.39
SIRPB1-213ENST00000568365 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
SIRPB1-213ENST00000568365 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
SIRPB1-213ENST00000568365 ZMYM4Q5VZL5 1548 aa12.61□□□□□ -0.39
SIRPB1-213ENST00000568365 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
SIRPB1-213ENST00000568365 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
SIRPB1-213ENST00000568365 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
SIRPB1-213ENST00000568365 PLEKHH2Q8IVE3 1493 aa12.61□□□□□ -0.39
SIRPB1-213ENST00000568365 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
SIRPB1-213ENST00000568365 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
SIRPB1-213ENST00000568365 UHRF1BP1Q6BDS2 1440 aa12.6□□□□□ -0.39
SIRPB1-213ENST00000568365 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
SIRPB1-213ENST00000568365 AFAP1Q8N556 730 aa12.59□□□□□ -0.39
SIRPB1-213ENST00000568365 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
SIRPB1-213ENST00000568365 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
SIRPB1-213ENST00000568365 NBR1Q14596 966 aa12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 TMC1Q8TDI8 760 aa12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
SIRPB1-213ENST00000568365 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
SIRPB1-213ENST00000568365 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
SIRPB1-213ENST00000568365 MAGI2Q86UL8 1455 aa12.55□□□□□ -0.4
SIRPB1-213ENST00000568365 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
SIRPB1-213ENST00000568365 KDM5DQ9BY66 1539 aa12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 TCERG1O14776 1098 aaKnown RBP12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 RALBP1Q15311 655 aa12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 INO80Q9ULG1 1556 aaPredicted RBP12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
SIRPB1-213ENST00000568365 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
SIRPB1-213ENST00000568365 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
SIRPB1-213ENST00000568365 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
SIRPB1-213ENST00000568365 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.4
SIRPB1-213ENST00000568365 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
SIRPB1-213ENST00000568365 PDE3BQ13370 1112 aa12.52□□□□□ -0.41
SIRPB1-213ENST00000568365 ATP7AQ04656 1500 aa12.52□□□□□ -0.41
SIRPB1-213ENST00000568365 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
SIRPB1-213ENST00000568365 MS4A1P11836 297 aa12.51□□□□□ -0.41
SIRPB1-213ENST00000568365 PKD2Q13563 968 aa12.5□□□□□ -0.41
SIRPB1-213ENST00000568365 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
SIRPB1-213ENST00000568365 ATP10AO60312 1499 aa12.5□□□□□ -0.41
SIRPB1-213ENST00000568365 INSRP06213 1382 aa12.49□□□□□ -0.41
SIRPB1-213ENST00000568365 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
SIRPB1-213ENST00000568365 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
SIRPB1-213ENST00000568365 MAST1Q9Y2H9 1570 aa12.49□□□□□ -0.41
SIRPB1-213ENST00000568365 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
SIRPB1-213ENST00000568365 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
SIRPB1-213ENST00000568365 CARD11Q9BXL7 1154 aa12.48□□□□□ -0.41
SIRPB1-213ENST00000568365 LAMC1P11047 1609 aa12.48□□□□□ -0.41
SIRPB1-213ENST00000568365 RTEL1-TNFRSF6BF6WH68 1400 aa12.48□□□□□ -0.41
SIRPB1-213ENST00000568365 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
SIRPB1-213ENST00000568365 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
SIRPB1-213ENST00000568365 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
SIRPB1-213ENST00000568365 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms