RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 KDM5CP41229 1560 aa23.64■■□□□ 1.37
COX4I1-215ENST00000568339 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
COX4I1-215ENST00000568339 KIDINS220Q9ULH0 1771 aa23.63■■□□□ 1.37
COX4I1-215ENST00000568339 NEO1Q92859 1461 aa23.62■■□□□ 1.37
COX4I1-215ENST00000568339 GLI2P10070 1586 aa23.61■■□□□ 1.37
COX4I1-215ENST00000568339 PLA2R1Q13018 1463 aa23.61■■□□□ 1.37
COX4I1-215ENST00000568339 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
COX4I1-215ENST00000568339 MAP3K4Q9Y6R4 1608 aa23.6■■□□□ 1.37
COX4I1-215ENST00000568339 POGZQ7Z3K3 1410 aa23.59■■□□□ 1.37
COX4I1-215ENST00000568339 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.37
COX4I1-215ENST00000568339 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
COX4I1-215ENST00000568339 HIRIP3Q9BW71 556 aaPredicted RBP23.57■■□□□ 1.36
COX4I1-215ENST00000568339 MLH3Q9UHC1 1453 aa23.57■■□□□ 1.36
COX4I1-215ENST00000568339 CCDC144AA2RUR9 1427 aa23.57■■□□□ 1.36
COX4I1-215ENST00000568339 HSPA5P11021 654 aaKnown RBP23.57■■□□□ 1.36
COX4I1-215ENST00000568339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.57■■□□□ 1.36
COX4I1-215ENST00000568339 SUPT16HQ9Y5B9 1047 aaKnown RBP23.57■■□□□ 1.36
COX4I1-215ENST00000568339 PRDM15P57071 1507 aaPredicted RBP23.56■■□□□ 1.36
COX4I1-215ENST00000568339 SPATA31E1Q6ZUB1 1445 aa23.56■■□□□ 1.36
COX4I1-215ENST00000568339 TET3O43151 1660 aa23.56■■□□□ 1.36
COX4I1-215ENST00000568339 E9PCH4 1651 aa23.55■■□□□ 1.36
COX4I1-215ENST00000568339 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
COX4I1-215ENST00000568339 MROH1Q8NDA8 1641 aa23.53■■□□□ 1.36
COX4I1-215ENST00000568339 HECW2Q9P2P5 1572 aa23.53■■□□□ 1.36
COX4I1-215ENST00000568339 RALGAPBQ86X10 1494 aa23.53■■□□□ 1.36
COX4I1-215ENST00000568339 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
COX4I1-215ENST00000568339 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
COX4I1-215ENST00000568339 BCORL1Q5H9F3 1711 aa23.51■■□□□ 1.35
COX4I1-215ENST00000568339 RNF17Q9BXT8 1623 aaKnown RBP23.5■■□□□ 1.35
COX4I1-215ENST00000568339 TRPM2O94759 1503 aa23.48■■□□□ 1.35
COX4I1-215ENST00000568339 KANK1Q14678 1352 aa23.48■■□□□ 1.35
COX4I1-215ENST00000568339 SPHKAPQ2M3C7 1700 aa23.48■■□□□ 1.35
COX4I1-215ENST00000568339 PTPRTO14522 1441 aa23.48■■□□□ 1.35
COX4I1-215ENST00000568339 A2MP01023 1474 aa23.48■■□□□ 1.35
COX4I1-215ENST00000568339 RICTORQ6R327 1708 aa23.45■■□□□ 1.35
COX4I1-215ENST00000568339 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
COX4I1-215ENST00000568339 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.34
COX4I1-215ENST00000568339 DIP2BQ9P265 1576 aa23.45■■□□□ 1.34
COX4I1-215ENST00000568339 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
COX4I1-215ENST00000568339 WASHC2AQ641Q2 1341 aa23.44■■□□□ 1.34
COX4I1-215ENST00000568339 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
COX4I1-215ENST00000568339 CEP152O94986 1710 aa23.43■■□□□ 1.34
COX4I1-215ENST00000568339 KIF3BO15066 747 aa23.42■■□□□ 1.34
COX4I1-215ENST00000568339 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
COX4I1-215ENST00000568339 TRPM1Q7Z4N2 1603 aa23.42■■□□□ 1.34
COX4I1-215ENST00000568339 NEURL4Q96JN8 1562 aa23.41■■□□□ 1.34
COX4I1-215ENST00000568339 PRAG1Q86YV5 1406 aa23.41■■□□□ 1.34
COX4I1-215ENST00000568339 DCAF11Q8TEB1 546 aa23.4■■□□□ 1.34
COX4I1-215ENST00000568339 EFCAB6Q5THR3 1501 aa23.4■■□□□ 1.34
COX4I1-215ENST00000568339 ANP32EQ9BTT0 268 aa23.39■■□□□ 1.34
COX4I1-215ENST00000568339 USP47Q96K76 1375 aa23.39■■□□□ 1.34
COX4I1-215ENST00000568339 CCDC7Q96M83 1385 aa23.39■■□□□ 1.34
COX4I1-215ENST00000568339 LAMC1P11047 1609 aa23.38■■□□□ 1.33
COX4I1-215ENST00000568339 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
COX4I1-215ENST00000568339 DIP2CQ9Y2E4 1556 aa23.37■■□□□ 1.33
COX4I1-215ENST00000568339 ZNF326Q5BKZ1 582 aaKnown RBP23.35■■□□□ 1.33
COX4I1-215ENST00000568339 PPRC1Q5VV67 1664 aaKnown RBP23.35■■□□□ 1.33
COX4I1-215ENST00000568339 CNTLNQ9NXG0 1405 aa23.34■■□□□ 1.33
COX4I1-215ENST00000568339 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
COX4I1-215ENST00000568339 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
COX4I1-215ENST00000568339 ANP32CO43423 234 aa23.33■■□□□ 1.33
COX4I1-215ENST00000568339 ZMYM4Q5VZL5 1548 aa23.33■■□□□ 1.33
COX4I1-215ENST00000568339 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
COX4I1-215ENST00000568339 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.32
COX4I1-215ENST00000568339 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
COX4I1-215ENST00000568339 STAC3Q96MF2 364 aa23.3■■□□□ 1.32
COX4I1-215ENST00000568339 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
COX4I1-215ENST00000568339 CARD11Q9BXL7 1154 aa23.3■■□□□ 1.32
COX4I1-215ENST00000568339 KIF7Q2M1P5 1343 aa23.29■■□□□ 1.32
COX4I1-215ENST00000568339 FAM69CQ0P6D2 419 aa23.29■■□□□ 1.32
COX4I1-215ENST00000568339 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
COX4I1-215ENST00000568339 ROCK2O75116 1388 aaKnown RBP23.28■■□□□ 1.32
COX4I1-215ENST00000568339 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
COX4I1-215ENST00000568339 ABCC3O15438 1527 aa23.25■■□□□ 1.31
COX4I1-215ENST00000568339 KIF1BO60333 1816 aa23.25■■□□□ 1.31
COX4I1-215ENST00000568339 ZC3H13Q5T200 1668 aaKnown RBP23.25■■□□□ 1.31
COX4I1-215ENST00000568339 KIF13AQ9H1H9 1805 aa23.23■■□□□ 1.31
COX4I1-215ENST00000568339 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
COX4I1-215ENST00000568339 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
COX4I1-215ENST00000568339 YEATS2Q9ULM3 1422 aa23.21■■□□□ 1.31
COX4I1-215ENST00000568339 REREQ9P2R6 1566 aa23.21■■□□□ 1.31
COX4I1-215ENST00000568339 NPATQ14207 1427 aa23.2■■□□□ 1.3
COX4I1-215ENST00000568339 IFT172Q9UG01 1749 aa23.2■■□□□ 1.3
COX4I1-215ENST00000568339 KIAA1210Q9ULL0 1709 aa23.2■■□□□ 1.3
COX4I1-215ENST00000568339 BCL11AQ9H165 835 aa23.19■■□□□ 1.3
COX4I1-215ENST00000568339 MYOM2P54296 1465 aa23.18■■□□□ 1.3
COX4I1-215ENST00000568339 UGGT1Q9NYU2 1555 aa23.17■■□□□ 1.3
COX4I1-215ENST00000568339 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
COX4I1-215ENST00000568339 ST20-MTHFSA0A0A6YYL1 179 aa23.16■■□□□ 1.3
COX4I1-215ENST00000568339 NBPF1Q3BBV0 1214 aa23.16■■□□□ 1.3
COX4I1-215ENST00000568339 ADGRB3O60242 1522 aa23.16■■□□□ 1.3
COX4I1-215ENST00000568339 MROH2AA6NES4 1674 aa23.15■■□□□ 1.3
COX4I1-215ENST00000568339 GGT6Q6P531 493 aa23.15■■□□□ 1.3
COX4I1-215ENST00000568339 IQGAP1P46940 1657 aa23.14■■□□□ 1.3
COX4I1-215ENST00000568339 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.29
COX4I1-215ENST00000568339 NOS1P29475 1434 aa23.13■■□□□ 1.29
COX4I1-215ENST00000568339 SIGLEC1Q9BZZ2 1709 aa23.12■■□□□ 1.29
COX4I1-215ENST00000568339 PIK3C2BO00750 1634 aa23.12■■□□□ 1.29
COX4I1-215ENST00000568339 AGLP35573 1532 aa23.12■■□□□ 1.29
COX4I1-215ENST00000568339 NRXN1Q9ULB1 1477 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms