RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 POLR1AO95602 1720 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-211ENST00000568291 RTEL1-TNFRSF6BF6WH68 1400 aa14.91□□□□□ -0.02
SF3B3-211ENST00000568291 GGT6Q6P531 493 aa14.9□□□□□ -0.02
SF3B3-211ENST00000568291 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
SF3B3-211ENST00000568291 SPATA31D1Q6ZQQ2 1576 aa14.9□□□□□ -0.02
SF3B3-211ENST00000568291 KDM5DQ9BY66 1539 aa14.89□□□□□ -0.03
SF3B3-211ENST00000568291 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
SF3B3-211ENST00000568291 ARHGEF5Q12774 1597 aa14.88□□□□□ -0.03
SF3B3-211ENST00000568291 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
SF3B3-211ENST00000568291 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
SF3B3-211ENST00000568291 NCKAP5LQ9HCH0 1330 aa14.86□□□□□ -0.03
SF3B3-211ENST00000568291 DHX29Q7Z478 1369 aaKnown RBP14.85□□□□□ -0.03
SF3B3-211ENST00000568291 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
SF3B3-211ENST00000568291 PZPP20742 1482 aa14.84□□□□□ -0.03
SF3B3-211ENST00000568291 ZNF335Q9H4Z2 1342 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-211ENST00000568291 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
SF3B3-211ENST00000568291 NEURL4Q96JN8 1562 aa14.83□□□□□ -0.04
SF3B3-211ENST00000568291 PKD2Q13563 968 aa14.83□□□□□ -0.04
SF3B3-211ENST00000568291 ZC3H13Q5T200 1668 aaKnown RBP14.82□□□□□ -0.04
SF3B3-211ENST00000568291 TNRQ92752 1358 aa14.82□□□□□ -0.04
SF3B3-211ENST00000568291 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
SF3B3-211ENST00000568291 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
SF3B3-211ENST00000568291 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
SF3B3-211ENST00000568291 KIF3BO15066 747 aa14.8□□□□□ -0.04
SF3B3-211ENST00000568291 CEP152O94986 1710 aa14.78□□□□□ -0.04
SF3B3-211ENST00000568291 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
SF3B3-211ENST00000568291 TSPY4P0CV99 314 aa14.77□□□□□ -0.05
SF3B3-211ENST00000568291 TSPY10P0CW01 314 aa14.77□□□□□ -0.05
SF3B3-211ENST00000568291 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.05
SF3B3-211ENST00000568291 MROH1Q8NDA8 1641 aa14.77□□□□□ -0.05
SF3B3-211ENST00000568291 ABCC3O15438 1527 aa14.76□□□□□ -0.05
SF3B3-211ENST00000568291 NLRP1Q9C000 1473 aa14.76□□□□□ -0.05
SF3B3-211ENST00000568291 RSPH4AQ5TD94 716 aa14.76□□□□□ -0.05
SF3B3-211ENST00000568291 DEPDC5O75140 1603 aa14.76□□□□□ -0.05
SF3B3-211ENST00000568291 FBXO31Q5XUX0 539 aaPredicted RBP14.75□□□□□ -0.05
SF3B3-211ENST00000568291 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
SF3B3-211ENST00000568291 CPS1P31327 1500 aa14.75□□□□□ -0.05
SF3B3-211ENST00000568291 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
SF3B3-211ENST00000568291 CFAP65Q6ZU64 1925 aaKnown RBP14.74□□□□□ -0.05
SF3B3-211ENST00000568291 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
SF3B3-211ENST00000568291 UBAP1LF5GYI3 381 aa14.74□□□□□ -0.05
SF3B3-211ENST00000568291 FAM50AQ14320 339 aaKnown RBP14.74□□□□□ -0.05
SF3B3-211ENST00000568291 ILDR2Q71H61 639 aa14.74□□□□□ -0.05
SF3B3-211ENST00000568291 CHIC2Q9UKJ5 165 aa14.74□□□□□ -0.05
SF3B3-211ENST00000568291 MIA2Q96PC5 1412 aa14.73□□□□□ -0.05
SF3B3-211ENST00000568291 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
SF3B3-211ENST00000568291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.72□□□□□ -0.05
SF3B3-211ENST00000568291 ERVK-7P63135 1459 aa14.71□□□□□ -0.05
SF3B3-211ENST00000568291 SHANK2Q9UPX8 1470 aa14.71□□□□□ -0.05
SF3B3-211ENST00000568291 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
SF3B3-211ENST00000568291 UBR1Q8IWV7 1749 aa14.7□□□□□ -0.06
SF3B3-211ENST00000568291 DUOX2Q9NRD8 1548 aa14.7□□□□□ -0.06
SF3B3-211ENST00000568291 NPHP4O75161 1426 aaPredicted RBP14.69□□□□□ -0.06
SF3B3-211ENST00000568291 FGD6Q6ZV73 1430 aa14.69□□□□□ -0.06
SF3B3-211ENST00000568291 PRDM15P57071 1507 aaPredicted RBP14.69□□□□□ -0.06
SF3B3-211ENST00000568291 MED14O60244 1454 aa14.69□□□□□ -0.06
SF3B3-211ENST00000568291 SYNMO15061 1565 aa14.68□□□□□ -0.06
SF3B3-211ENST00000568291 STRCP1A6NGW2 1772 aa14.68□□□□□ -0.06
SF3B3-211ENST00000568291 PTPN23Q9H3S7 1636 aa14.68□□□□□ -0.06
SF3B3-211ENST00000568291 ABCC5O15440 1437 aa14.67□□□□□ -0.06
SF3B3-211ENST00000568291 SOCS7O14512 581 aa14.67□□□□□ -0.06
SF3B3-211ENST00000568291 ITGAEP38570 1179 aa14.67□□□□□ -0.06
SF3B3-211ENST00000568291 ANKLE2Q86XL3 938 aa14.66□□□□□ -0.06
SF3B3-211ENST00000568291 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-211ENST00000568291 MED1Q15648 1581 aaPredicted RBP14.65□□□□□ -0.06
SF3B3-211ENST00000568291 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
SF3B3-211ENST00000568291 KIF15Q9NS87 1388 aa14.64□□□□□ -0.07
SF3B3-211ENST00000568291 ALKQ9UM73 1620 aa14.64□□□□□ -0.07
SF3B3-211ENST00000568291 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
SF3B3-211ENST00000568291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.079e-8■■□□□ 13.5
SF3B3-211ENST00000568291 DAPK1P53355 1430 aa14.63□□□□□ -0.07
SF3B3-211ENST00000568291 PIP4K2BP78356 416 aa14.61□□□□□ -0.07
SF3B3-211ENST00000568291 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
SF3B3-211ENST00000568291 SCAF11Q99590 1463 aaKnown RBP14.61□□□□□ -0.07
SF3B3-211ENST00000568291 TOM1O60784 492 aa14.6□□□□□ -0.07
SF3B3-211ENST00000568291 SLIT1O75093 1534 aa14.6□□□□□ -0.07
SF3B3-211ENST00000568291 ARHGAP31Q2M1Z3 1444 aa14.59□□□□□ -0.07
SF3B3-211ENST00000568291 ARHGAP23Q9P227 1491 aa14.59□□□□□ -0.07
SF3B3-211ENST00000568291 HSPA1LP34931 641 aa14.59□□□□□ -0.07
SF3B3-211ENST00000568291 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
SF3B3-211ENST00000568291 LRRC7Q96NW7 1537 aa14.59□□□□□ -0.07
SF3B3-211ENST00000568291 XIRP1Q702N8 1843 aaKnown RBP14.59□□□□□ -0.07
SF3B3-211ENST00000568291 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.08
SF3B3-211ENST00000568291 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
SF3B3-211ENST00000568291 EFCAB6Q5THR3 1501 aa14.55□□□□□ -0.08
SF3B3-211ENST00000568291 LMTK2Q8IWU2 1503 aa14.55□□□□□ -0.08
SF3B3-211ENST00000568291 KANK1Q14678 1352 aa14.54□□□□□ -0.08
SF3B3-211ENST00000568291 ADGRB3O60242 1522 aa14.52□□□□□ -0.08
SF3B3-211ENST00000568291 MYO5BQ9ULV0 1848 aa14.51□□□□□ -0.09
SF3B3-211ENST00000568291 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
SF3B3-211ENST00000568291 LTKP29376 864 aa14.5□□□□□ -0.09
SF3B3-211ENST00000568291 TMEM2Q9UHN6 1383 aa14.49□□□□□ -0.09
SF3B3-211ENST00000568291 TXNDC2Q86VQ3 553 aa14.49□□□□□ -0.09
SF3B3-211ENST00000568291 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
SF3B3-211ENST00000568291 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
SF3B3-211ENST00000568291 TET3O43151 1660 aa14.48□□□□□ -0.09
SF3B3-211ENST00000568291 NOS1P29475 1434 aa14.47□□□□□ -0.09
SF3B3-211ENST00000568291 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
SF3B3-211ENST00000568291 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
SF3B3-211ENST00000568291 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms