RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
HERC2-209ENST00000567869 KIF14Q15058 1648 aa11.66□□□□□ -0.54
HERC2-209ENST00000567869 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
HERC2-209ENST00000567869 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.54
HERC2-209ENST00000567869 RGS3P49796 1198 aa11.64□□□□□ -0.55
HERC2-209ENST00000567869 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
HERC2-209ENST00000567869 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
HERC2-209ENST00000567869 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
HERC2-209ENST00000567869 CHD1O14646 1710 aa11.63□□□□□ -0.55
HERC2-209ENST00000567869 NUDCQ9Y266 331 aa11.63□□□□□ -0.55
HERC2-209ENST00000567869 CAMSAP2Q08AD1 1489 aa11.62□□□□□ -0.55
HERC2-209ENST00000567869 FSD2A1L4K1 749 aa11.62□□□□□ -0.55
HERC2-209ENST00000567869 ABCA8O94911 1581 aa11.62□□□□□ -0.55
HERC2-209ENST00000567869 HSPA5P11021 654 aaKnown RBP11.62□□□□□ -0.55
HERC2-209ENST00000567869 DENND4BO75064 1496 aaPredicted RBP11.62□□□□□ -0.55
HERC2-209ENST00000567869 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.553e-10■■■■■ 54.3
HERC2-209ENST00000567869 ZNF326Q5BKZ1 582 aaKnown RBP11.61□□□□□ -0.55
HERC2-209ENST00000567869 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
HERC2-209ENST00000567869 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
HERC2-209ENST00000567869 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
HERC2-209ENST00000567869 NAP1L5Q96NT1 182 aaPredicted RBP11.6□□□□□ -0.55
HERC2-209ENST00000567869 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
HERC2-209ENST00000567869 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
HERC2-209ENST00000567869 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
HERC2-209ENST00000567869 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
HERC2-209ENST00000567869 POGKQ9P215 609 aa11.59□□□□□ -0.55
HERC2-209ENST00000567869 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
HERC2-209ENST00000567869 TSPY4P0CV99 314 aa11.58□□□□□ -0.56
HERC2-209ENST00000567869 TSPY10P0CW01 314 aa11.58□□□□□ -0.56
HERC2-209ENST00000567869 NCOA1Q15788 1441 aa11.58□□□□□ -0.56
HERC2-209ENST00000567869 XRCC6P12956 609 aaKnown RBP eCLIP11.57□□□□□ -0.56
HERC2-209ENST00000567869 TAF7LQ5H9L4 462 aa11.57□□□□□ -0.56
HERC2-209ENST00000567869 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
HERC2-209ENST00000567869 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
HERC2-209ENST00000567869 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
HERC2-209ENST00000567869 ITSN2Q9NZM3 1697 aa11.56□□□□□ -0.56
HERC2-209ENST00000567869 EIF4G2P78344 907 aaKnown RBP eCLIP11.56□□□□□ -0.56
HERC2-209ENST00000567869 ARXQ96QS3 562 aa11.56□□□□□ -0.56
HERC2-209ENST00000567869 ABCC10Q5T3U5 1492 aa11.56□□□□□ -0.56
HERC2-209ENST00000567869 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
HERC2-209ENST00000567869 TPM2P07951 284 aa11.55□□□□□ -0.56
HERC2-209ENST00000567869 ADCY10Q96PN6 1610 aa11.54□□□□□ -0.56
HERC2-209ENST00000567869 PKD2Q13563 968 aa11.54□□□□□ -0.56
HERC2-209ENST00000567869 SKAP1Q86WV1 359 aa11.54□□□□□ -0.56
HERC2-209ENST00000567869 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
HERC2-209ENST00000567869 CDC42BPAQ5VT25 1732 aa11.54□□□□□ -0.56
HERC2-209ENST00000567869 L1TD1Q5T7N2 865 aaKnown RBP11.53□□□□□ -0.56
HERC2-209ENST00000567869 ANKRD50Q9ULJ7 1429 aa11.53□□□□□ -0.56
HERC2-209ENST00000567869 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.56
HERC2-209ENST00000567869 SMAP1Q8IYB5 467 aaPredicted RBP11.52□□□□□ -0.56
HERC2-209ENST00000567869 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
HERC2-209ENST00000567869 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.57
HERC2-209ENST00000567869 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
HERC2-209ENST00000567869 RIPK4P57078 832 aa11.51□□□□□ -0.57
HERC2-209ENST00000567869 NUP155O75694 1391 aa11.51□□□□□ -0.57
HERC2-209ENST00000567869 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
HERC2-209ENST00000567869 C8orf34Q49A92 452 aa11.5□□□□□ -0.57
HERC2-209ENST00000567869 PZPP20742 1482 aa11.5□□□□□ -0.57
HERC2-209ENST00000567869 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
HERC2-209ENST00000567869 PANK2Q9BZ23 570 aa11.49□□□□□ -0.57
HERC2-209ENST00000567869 UTP14CQ5TAP6 766 aaKnown RBP11.49□□□□□ -0.57
HERC2-209ENST00000567869 RRP1P56182 461 aaKnown RBP11.49□□□□□ -0.57
HERC2-209ENST00000567869 IPO4Q8TEX9 1081 aaKnown RBP11.49□□□□□ -0.57
HERC2-209ENST00000567869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.57
HERC2-209ENST00000567869 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
HERC2-209ENST00000567869 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
HERC2-209ENST00000567869 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
HERC2-209ENST00000567869 NLRP1Q9C000 1473 aa11.48□□□□□ -0.57
HERC2-209ENST00000567869 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
HERC2-209ENST00000567869 CCDC7Q96M83 1385 aa11.48□□□□□ -0.57
HERC2-209ENST00000567869 ANTXR1Q9H6X2 564 aa11.48□□□□□ -0.57
HERC2-209ENST00000567869 ADGRL2O95490 1459 aa11.48□□□□□ -0.57
HERC2-209ENST00000567869 USP19O94966 1318 aa11.47□□□□□ -0.57
HERC2-209ENST00000567869 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
HERC2-209ENST00000567869 TMEM51Q9NW97 253 aa11.47□□□□□ -0.57
HERC2-209ENST00000567869 SPATA31E1Q6ZUB1 1445 aa11.47□□□□□ -0.57
HERC2-209ENST00000567869 ARHGAP5Q13017 1502 aa11.46□□□□□ -0.57
HERC2-209ENST00000567869 ABCC2Q92887 1545 aa11.46□□□□□ -0.57
HERC2-209ENST00000567869 MBD5Q9P267 1494 aa11.46□□□□□ -0.57
HERC2-209ENST00000567869 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.57
HERC2-209ENST00000567869 TERF1P54274 439 aa11.46□□□□□ -0.58
HERC2-209ENST00000567869 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.58
HERC2-209ENST00000567869 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 CROCC2H7BZ55 1655 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 CDC42BPBQ9Y5S2 1711 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 ESPNB1AK53 854 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
HERC2-209ENST00000567869 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
HERC2-209ENST00000567869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.44□□□□□ -0.58
HERC2-209ENST00000567869 DMTNQ08495 405 aa11.44□□□□□ -0.58
HERC2-209ENST00000567869 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
HERC2-209ENST00000567869 CCDC141Q6ZP82 1450 aa11.43□□□□□ -0.58
HERC2-209ENST00000567869 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
HERC2-209ENST00000567869 SYCP2Q9BX26 1530 aa11.43□□□□□ -0.58
HERC2-209ENST00000567869 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
HERC2-209ENST00000567869 ZSCAN20P17040 1043 aaPredicted RBP11.42□□□□□ -0.58
HERC2-209ENST00000567869 EFCAB2Q5VUJ9 269 aa11.42□□□□□ -0.58
HERC2-209ENST00000567869 SHANK2Q9UPX8 1470 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms