RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
GTF3C1-208ENST00000567843 PTPRTO14522 1441 aa19.07■□□□□ 0.64
GTF3C1-208ENST00000567843 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
GTF3C1-208ENST00000567843 MYO3AQ8NEV4 1616 aa19.05■□□□□ 0.64
GTF3C1-208ENST00000567843 ABCC5O15440 1437 aa19.05■□□□□ 0.64
GTF3C1-208ENST00000567843 MAST1Q9Y2H9 1570 aa19.05■□□□□ 0.64
GTF3C1-208ENST00000567843 TNRQ92752 1358 aa19.05■□□□□ 0.64
GTF3C1-208ENST00000567843 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
GTF3C1-208ENST00000567843 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
GTF3C1-208ENST00000567843 FGD6Q6ZV73 1430 aa19.03■□□□□ 0.64
GTF3C1-208ENST00000567843 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
GTF3C1-208ENST00000567843 PZPP20742 1482 aa19.02■□□□□ 0.63
GTF3C1-208ENST00000567843 FAM50AQ14320 339 aaKnown RBP19.01■□□□□ 0.63
GTF3C1-208ENST00000567843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.637e-8■□□□□ 8.4
GTF3C1-208ENST00000567843 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
GTF3C1-208ENST00000567843 A2ML1A8K2U0 1454 aa19■□□□□ 0.63
GTF3C1-208ENST00000567843 DAPK1P53355 1430 aa19■□□□□ 0.63
GTF3C1-208ENST00000567843 PKD2Q13563 968 aa18.99■□□□□ 0.63
GTF3C1-208ENST00000567843 ZNF335Q9H4Z2 1342 aaPredicted RBP18.99■□□□□ 0.63
GTF3C1-208ENST00000567843 PPARGC1BQ86YN6 1023 aaKnown RBP18.98■□□□□ 0.63
GTF3C1-208ENST00000567843 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
GTF3C1-208ENST00000567843 ABCC3O15438 1527 aa18.97■□□□□ 0.63
GTF3C1-208ENST00000567843 DUOX2Q9NRD8 1548 aa18.97■□□□□ 0.63
GTF3C1-208ENST00000567843 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
GTF3C1-208ENST00000567843 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
GTF3C1-208ENST00000567843 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
GTF3C1-208ENST00000567843 RNF17Q9BXT8 1623 aaKnown RBP18.96■□□□□ 0.63
GTF3C1-208ENST00000567843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
GTF3C1-208ENST00000567843 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
GTF3C1-208ENST00000567843 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
GTF3C1-208ENST00000567843 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
GTF3C1-208ENST00000567843 MROH1Q8NDA8 1641 aa18.93■□□□□ 0.62
GTF3C1-208ENST00000567843 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
GTF3C1-208ENST00000567843 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
GTF3C1-208ENST00000567843 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
GTF3C1-208ENST00000567843 CROCC2H7BZ55 1655 aa18.92■□□□□ 0.62
GTF3C1-208ENST00000567843 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
GTF3C1-208ENST00000567843 ANKLE2Q86XL3 938 aa18.9■□□□□ 0.62
GTF3C1-208ENST00000567843 ERVK-7P63135 1459 aa18.9■□□□□ 0.62
GTF3C1-208ENST00000567843 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
GTF3C1-208ENST00000567843 CEP152O94986 1710 aa18.89■□□□□ 0.61
GTF3C1-208ENST00000567843 CFAP65Q6ZU64 1925 aaKnown RBP18.89■□□□□ 0.61
GTF3C1-208ENST00000567843 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.61
GTF3C1-208ENST00000567843 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
GTF3C1-208ENST00000567843 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
GTF3C1-208ENST00000567843 KANK1Q14678 1352 aa18.85■□□□□ 0.61
GTF3C1-208ENST00000567843 ITGAEP38570 1179 aa18.84■□□□□ 0.61
GTF3C1-208ENST00000567843 NEURL4Q96JN8 1562 aa18.84■□□□□ 0.61
GTF3C1-208ENST00000567843 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
GTF3C1-208ENST00000567843 UBAP1LF5GYI3 381 aa18.83■□□□□ 0.6
GTF3C1-208ENST00000567843 NPHP4O75161 1426 aaPredicted RBP18.82■□□□□ 0.6
GTF3C1-208ENST00000567843 ARHGAP31Q2M1Z3 1444 aa18.8■□□□□ 0.6
GTF3C1-208ENST00000567843 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
GTF3C1-208ENST00000567843 ADGRL2O95490 1459 aa18.79■□□□□ 0.6
GTF3C1-208ENST00000567843 STAG3Q9UJ98 1225 aa18.79■□□□□ 0.6
GTF3C1-208ENST00000567843 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
GTF3C1-208ENST00000567843 LTKP29376 864 aa18.78■□□□□ 0.6
GTF3C1-208ENST00000567843 DEPDC5O75140 1603 aa18.78■□□□□ 0.6
GTF3C1-208ENST00000567843 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
GTF3C1-208ENST00000567843 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
GTF3C1-208ENST00000567843 IDI1Q13907 227 aa18.76■□□□□ 0.59
GTF3C1-208ENST00000567843 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
GTF3C1-208ENST00000567843 MED14O60244 1454 aa18.74■□□□□ 0.59
GTF3C1-208ENST00000567843 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
GTF3C1-208ENST00000567843 VWDEQ8N2E2 1590 aa18.73■□□□□ 0.59
GTF3C1-208ENST00000567843 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
GTF3C1-208ENST00000567843 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
GTF3C1-208ENST00000567843 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
GTF3C1-208ENST00000567843 EID1Q9Y6B2 187 aa18.72■□□□□ 0.59
GTF3C1-208ENST00000567843 SCAF11Q99590 1463 aaKnown RBP18.71■□□□□ 0.59
GTF3C1-208ENST00000567843 PIK3C2BO00750 1634 aa18.71■□□□□ 0.58
GTF3C1-208ENST00000567843 IQGAP1P46940 1657 aa18.7■□□□□ 0.58
GTF3C1-208ENST00000567843 ARHGAP23Q9P227 1491 aa18.69■□□□□ 0.58
GTF3C1-208ENST00000567843 CPS1P31327 1500 aa18.69■□□□□ 0.58
GTF3C1-208ENST00000567843 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
GTF3C1-208ENST00000567843 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
GTF3C1-208ENST00000567843 SYNMO15061 1565 aa18.68■□□□□ 0.58
GTF3C1-208ENST00000567843 NOS1P29475 1434 aa18.68■□□□□ 0.58
GTF3C1-208ENST00000567843 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
GTF3C1-208ENST00000567843 ROCK1Q13464 1354 aa18.67■□□□□ 0.58
GTF3C1-208ENST00000567843 SLIT1O75093 1534 aa18.66■□□□□ 0.58
GTF3C1-208ENST00000567843 TOM1O60784 492 aa18.66■□□□□ 0.58
GTF3C1-208ENST00000567843 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
GTF3C1-208ENST00000567843 BCANQ96GW7 911 aa18.65■□□□□ 0.58
GTF3C1-208ENST00000567843 SLC26A8Q96RN1 970 aa18.65■□□□□ 0.58
GTF3C1-208ENST00000567843 SLC52A1Q9NWF4 448 aa18.65■□□□□ 0.58
GTF3C1-208ENST00000567843 NUP155O75694 1391 aa18.64■□□□□ 0.57
GTF3C1-208ENST00000567843 STRCP1A6NGW2 1772 aa18.63■□□□□ 0.57
GTF3C1-208ENST00000567843 HSPA1LP34931 641 aa18.62■□□□□ 0.57
GTF3C1-208ENST00000567843 LRRC7Q96NW7 1537 aa18.62■□□□□ 0.57
GTF3C1-208ENST00000567843 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
GTF3C1-208ENST00000567843 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
GTF3C1-208ENST00000567843 UNC13BO14795 1591 aa18.59■□□□□ 0.57
GTF3C1-208ENST00000567843 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
GTF3C1-208ENST00000567843 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
GTF3C1-208ENST00000567843 TET3O43151 1660 aa18.59■□□□□ 0.57
GTF3C1-208ENST00000567843 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
GTF3C1-208ENST00000567843 ILDR2Q71H61 639 aa18.58■□□□□ 0.56
GTF3C1-208ENST00000567843 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
GTF3C1-208ENST00000567843 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms