RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MIA2Q96PC5 1412 aa29.28■■■□□ 2.28
LINC01238-205ENST00000567549 CEP170BQ9Y4F5 1589 aaPredicted RBP29.27■■■□□ 2.28
LINC01238-205ENST00000567549 PKD2Q13563 968 aa29.27■■■□□ 2.28
LINC01238-205ENST00000567549 WASHC2CQ9Y4E1 1318 aa29.23■■■□□ 2.27
LINC01238-205ENST00000567549 MYOM3Q5VTT5 1437 aa29.23■■■□□ 2.27
LINC01238-205ENST00000567549 MAST1Q9Y2H9 1570 aa29.22■■■□□ 2.27
LINC01238-205ENST00000567549 IQSEC2Q5JU85 1478 aa29.21■■■□□ 2.27
LINC01238-205ENST00000567549 A2ML1A8K2U0 1454 aa29.2■■■□□ 2.26
LINC01238-205ENST00000567549 PZPP20742 1482 aa29.19■■■□□ 2.26
LINC01238-205ENST00000567549 TNRQ92752 1358 aa29.16■■■□□ 2.26
LINC01238-205ENST00000567549 EIF2AK4Q9P2K8 1649 aaKnown RBP29.16■■■□□ 2.26
LINC01238-205ENST00000567549 KANK4Q5T7N3 995 aaPredicted RBP29.14■■■□□ 2.26
LINC01238-205ENST00000567549 TCOF1Q13428 1488 aaKnown RBP29.14■■■□□ 2.26
LINC01238-205ENST00000567549 ZC3H13Q5T200 1668 aaKnown RBP29.14■■■□□ 2.26
LINC01238-205ENST00000567549 NCKAP5LQ9HCH0 1330 aa29.13■■■□□ 2.25
LINC01238-205ENST00000567549 RNF17Q9BXT8 1623 aaKnown RBP29.12■■■□□ 2.25
LINC01238-205ENST00000567549 LTBP4Q8N2S1 1624 aa29.11■■■□□ 2.25
LINC01238-205ENST00000567549 DNMT1P26358 1616 aaKnown RBP29.1■■■□□ 2.25
LINC01238-205ENST00000567549 NLRP1Q9C000 1473 aa29.1■■■□□ 2.25
LINC01238-205ENST00000567549 DUOX2Q9NRD8 1548 aa29.07■■■□□ 2.24
LINC01238-205ENST00000567549 THEMISQ8N1K5 641 aaPredicted RBP29.06■■■□□ 2.24
LINC01238-205ENST00000567549 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
LINC01238-205ENST00000567549 POLR1AO95602 1720 aaPredicted RBP29.04■■■□□ 2.24
LINC01238-205ENST00000567549 FBXO31Q5XUX0 539 aaPredicted RBP29.04■■■□□ 2.24
LINC01238-205ENST00000567549 PTPN23Q9H3S7 1636 aa29.02■■■□□ 2.24
LINC01238-205ENST00000567549 ABCC3O15438 1527 aa29■■■□□ 2.23
LINC01238-205ENST00000567549 CROCC2H7BZ55 1655 aa29■■■□□ 2.23
LINC01238-205ENST00000567549 ANKLE2Q86XL3 938 aa29■■■□□ 2.23
LINC01238-205ENST00000567549 UGGT1Q9NYU2 1555 aa29■■■□□ 2.23
LINC01238-205ENST00000567549 ERBINQ96RT1 1412 aa28.99■■■□□ 2.23
LINC01238-205ENST00000567549 ZNF335Q9H4Z2 1342 aaPredicted RBP28.98■■■□□ 2.23
LINC01238-205ENST00000567549 KIF15Q9NS87 1388 aa28.98■■■□□ 2.23
LINC01238-205ENST00000567549 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.23
LINC01238-205ENST00000567549 SPATA31D1Q6ZQQ2 1576 aa28.95■■■□□ 2.22
LINC01238-205ENST00000567549 KANK1Q14678 1352 aa28.93■■■□□ 2.22
LINC01238-205ENST00000567549 ABCC5O15440 1437 aa28.93■■■□□ 2.22
LINC01238-205ENST00000567549 DAPK1P53355 1430 aa28.93■■■□□ 2.22
LINC01238-205ENST00000567549 DEPDC5O75140 1603 aa28.91■■■□□ 2.22
LINC01238-205ENST00000567549 ANKRD30AQ9BXX3 1397 aa28.91■■■□□ 2.22
LINC01238-205ENST00000567549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.91■■■□□ 2.22
LINC01238-205ENST00000567549 CPS1P31327 1500 aa28.91■■■□□ 2.22
LINC01238-205ENST00000567549 ERVK-7P63135 1459 aa28.91■■■□□ 2.22
LINC01238-205ENST00000567549 PRDM15P57071 1507 aaPredicted RBP28.9■■■□□ 2.22
LINC01238-205ENST00000567549 CEP152O94986 1710 aa28.9■■■□□ 2.22
LINC01238-205ENST00000567549 MROH1Q8NDA8 1641 aa28.9■■■□□ 2.22
LINC01238-205ENST00000567549 RRP7BPQ9NSQ0 103 aa28.89■■■□□ 2.22
LINC01238-205ENST00000567549 NEURL4Q96JN8 1562 aa28.88■■■□□ 2.21
LINC01238-205ENST00000567549 UBAP1LF5GYI3 381 aa28.87■■■□□ 2.21
LINC01238-205ENST00000567549 ARHGAP31Q2M1Z3 1444 aa28.86■■■□□ 2.21
LINC01238-205ENST00000567549 MED14O60244 1454 aa28.86■■■□□ 2.21
LINC01238-205ENST00000567549 NPHP4O75161 1426 aaPredicted RBP28.86■■■□□ 2.21
LINC01238-205ENST00000567549 CFAP65Q6ZU64 1925 aaKnown RBP28.81■■■□□ 2.2
LINC01238-205ENST00000567549 IQGAP1P46940 1657 aa28.8■■■□□ 2.2
LINC01238-205ENST00000567549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.79■■■□□ 2.2
LINC01238-205ENST00000567549 DISP3Q9P2K9 1392 aa28.78■■■□□ 2.2
LINC01238-205ENST00000567549 TOM1O60784 492 aa28.78■■■□□ 2.2
LINC01238-205ENST00000567549 UBR1Q8IWV7 1749 aa28.75■■■□□ 2.19
LINC01238-205ENST00000567549 CHIC2Q9UKJ5 165 aa28.75■■■□□ 2.19
LINC01238-205ENST00000567549 EID1Q9Y6B2 187 aa28.74■■■□□ 2.19
LINC01238-205ENST00000567549 ADGRL2O95490 1459 aa28.73■■■□□ 2.19
LINC01238-205ENST00000567549 FAM50AQ14320 339 aaKnown RBP28.73■■■□□ 2.19
LINC01238-205ENST00000567549 STAG3Q9UJ98 1225 aa28.73■■■□□ 2.19
LINC01238-205ENST00000567549 LMTK2Q8IWU2 1503 aa28.73■■■□□ 2.19
LINC01238-205ENST00000567549 SCAF11Q99590 1463 aaKnown RBP28.72■■■□□ 2.19
LINC01238-205ENST00000567549 VWDEQ8N2E2 1590 aa28.71■■■□□ 2.19
LINC01238-205ENST00000567549 SLIT1O75093 1534 aa28.69■■■□□ 2.18
LINC01238-205ENST00000567549 KDM5AP29375 1690 aaKnown RBP28.68■■■□□ 2.18
LINC01238-205ENST00000567549 SCAF1Q9H7N4 1312 aaKnown RBP28.67■■■□□ 2.18
LINC01238-205ENST00000567549 SYNMO15061 1565 aa28.67■■■□□ 2.18
LINC01238-205ENST00000567549 ARHGAP23Q9P227 1491 aa28.66■■■□□ 2.18
LINC01238-205ENST00000567549 TXNDC2Q86VQ3 553 aa28.65■■■□□ 2.18
LINC01238-205ENST00000567549 ANKRD50Q9ULJ7 1429 aa28.63■■■□□ 2.17
LINC01238-205ENST00000567549 PIK3C2BO00750 1634 aa28.62■■■□□ 2.17
LINC01238-205ENST00000567549 EFCAB6Q5THR3 1501 aa28.62■■■□□ 2.17
LINC01238-205ENST00000567549 RPRD2Q5VT52 1461 aaKnown RBP28.61■■■□□ 2.17
LINC01238-205ENST00000567549 PIP4K2BP78356 416 aa28.6■■■□□ 2.17
LINC01238-205ENST00000567549 SLC52A1Q9NWF4 448 aa28.6■■■□□ 2.17
LINC01238-205ENST00000567549 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
LINC01238-205ENST00000567549 NOS1P29475 1434 aa28.55■■■□□ 2.16
LINC01238-205ENST00000567549 LRRC7Q96NW7 1537 aa28.54■■■□□ 2.16
LINC01238-205ENST00000567549 LTKP29376 864 aa28.54■■■□□ 2.16
LINC01238-205ENST00000567549 IDI1Q13907 227 aa28.54■■■□□ 2.16
LINC01238-205ENST00000567549 ROCK1Q13464 1354 aa28.52■■■□□ 2.16
LINC01238-205ENST00000567549 TET3O43151 1660 aa28.52■■■□□ 2.16
LINC01238-205ENST00000567549 HDGFP51858 240 aaKnown RBP28.52■■■□□ 2.16
LINC01238-205ENST00000567549 ADGRB3O60242 1522 aa28.52■■■□□ 2.16
LINC01238-205ENST00000567549 STRCP1A6NGW2 1772 aa28.5■■■□□ 2.15
LINC01238-205ENST00000567549 GCC2Q8IWJ2 1684 aa28.49■■■□□ 2.15
LINC01238-205ENST00000567549 HSPA1LP34931 641 aa28.48■■■□□ 2.15
LINC01238-205ENST00000567549 UNC13BO14795 1591 aa28.47■■■□□ 2.15
LINC01238-205ENST00000567549 SOCS7O14512 581 aa28.43■■■□□ 2.14
LINC01238-205ENST00000567549 BCANQ96GW7 911 aa28.42■■■□□ 2.14
LINC01238-205ENST00000567549 ILDR2Q71H61 639 aa28.41■■■□□ 2.14
LINC01238-205ENST00000567549 KCNA6P17658 529 aa28.39■■■□□ 2.14
LINC01238-205ENST00000567549 PPP1R15AO75807 674 aaPredicted RBP28.38■■■□□ 2.13
LINC01238-205ENST00000567549 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
LINC01238-205ENST00000567549 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
LINC01238-205ENST00000567549 ALKQ9UM73 1620 aa28.36■■■□□ 2.13
LINC01238-205ENST00000567549 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
LINC01238-205ENST00000567549 MED1Q15648 1581 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms