RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
CDH13-210ENST00000567445 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
CDH13-210ENST00000567445 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
CDH13-210ENST00000567445 UHRF1BP1Q6BDS2 1440 aa14.73□□□□□ -0.05
CDH13-210ENST00000567445 EHBP1L1Q8N3D4 1523 aa14.72□□□□□ -0.05
CDH13-210ENST00000567445 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
CDH13-210ENST00000567445 C3P01024 1663 aa14.72□□□□□ -0.05
CDH13-210ENST00000567445 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
CDH13-210ENST00000567445 ATP7AQ04656 1500 aa14.71□□□□□ -0.05
CDH13-210ENST00000567445 TIAM1Q13009 1591 aa14.7□□□□□ -0.06
CDH13-210ENST00000567445 INO80Q9ULG1 1556 aaPredicted RBP14.69□□□□□ -0.06
CDH13-210ENST00000567445 ZNF644Q9H582 1327 aaPredicted RBP14.68□□□□□ -0.06
CDH13-210ENST00000567445 SUPT6HQ7KZ85 1726 aaKnown RBP14.68□□□□□ -0.06
CDH13-210ENST00000567445 A2MP01023 1474 aa14.67□□□□□ -0.06
CDH13-210ENST00000567445 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
CDH13-210ENST00000567445 STRCQ7RTU9 1775 aa14.67□□□□□ -0.06
CDH13-210ENST00000567445 CERKQ8TCT0 537 aa14.66□□□□□ -0.06
CDH13-210ENST00000567445 MBD5Q9P267 1494 aa14.66□□□□□ -0.06
CDH13-210ENST00000567445 MROH2AA6NES4 1674 aa14.65□□□□□ -0.06
CDH13-210ENST00000567445 ZMYM3Q14202 1370 aa14.64□□□□□ -0.07
CDH13-210ENST00000567445 NPATQ14207 1427 aa14.64□□□□□ -0.07
CDH13-210ENST00000567445 ADGBQ8N7X0 1667 aa14.63□□□□□ -0.07
CDH13-210ENST00000567445 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
CDH13-210ENST00000567445 RTEL1-TNFRSF6BF6WH68 1400 aa14.63□□□□□ -0.07
CDH13-210ENST00000567445 GGT6Q6P531 493 aa14.62□□□□□ -0.07
CDH13-210ENST00000567445 CLTCQ00610 1675 aaKnown RBP14.61□□□□□ -0.07
CDH13-210ENST00000567445 PTPRTO14522 1441 aa14.6□□□□□ -0.07
CDH13-210ENST00000567445 VPS8Q8N3P4 1428 aa14.6□□□□□ -0.07
CDH13-210ENST00000567445 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
CDH13-210ENST00000567445 CAMSAP2Q08AD1 1489 aa14.59□□□□□ -0.07
CDH13-210ENST00000567445 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
CDH13-210ENST00000567445 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
CDH13-210ENST00000567445 ZNF692Q9BU19 519 aaPredicted RBP14.59□□□□□ -0.07
CDH13-210ENST00000567445 DHX29Q7Z478 1369 aaKnown RBP14.59□□□□□ -0.07
CDH13-210ENST00000567445 NCOA1Q15788 1441 aa14.59□□□□□ -0.07
CDH13-210ENST00000567445 PTPRKQ15262 1439 aa14.57□□□□□ -0.08
CDH13-210ENST00000567445 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
CDH13-210ENST00000567445 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
CDH13-210ENST00000567445 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
CDH13-210ENST00000567445 MYO3AQ8NEV4 1616 aa14.54□□□□□ -0.08
CDH13-210ENST00000567445 ARHGEF5Q12774 1597 aa14.54□□□□□ -0.08
CDH13-210ENST00000567445 KIF3BO15066 747 aa14.54□□□□□ -0.08
CDH13-210ENST00000567445 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
CDH13-210ENST00000567445 ZNF142P52746 1687 aaPredicted RBP14.53□□□□□ -0.08
CDH13-210ENST00000567445 MAP3K1Q13233 1512 aa14.53□□□□□ -0.08
CDH13-210ENST00000567445 TSPY4P0CV99 314 aa14.52□□□□□ -0.08
CDH13-210ENST00000567445 TSPY10P0CW01 314 aa14.52□□□□□ -0.08
CDH13-210ENST00000567445 CEP170BQ9Y4F5 1589 aaPredicted RBP14.52□□□□□ -0.09
CDH13-210ENST00000567445 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
CDH13-210ENST00000567445 PLA2R1Q13018 1463 aa14.51□□□□□ -0.09
CDH13-210ENST00000567445 KANK4Q5T7N3 995 aaPredicted RBP14.5□□□□□ -0.09
CDH13-210ENST00000567445 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
CDH13-210ENST00000567445 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
CDH13-210ENST00000567445 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
CDH13-210ENST00000567445 PKD2Q13563 968 aa14.5□□□□□ -0.09
CDH13-210ENST00000567445 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
CDH13-210ENST00000567445 WASHC2CQ9Y4E1 1318 aa14.48□□□□□ -0.09
CDH13-210ENST00000567445 A2ML1A8K2U0 1454 aa14.48□□□□□ -0.09
CDH13-210ENST00000567445 TCOF1Q13428 1488 aaKnown RBP14.48□□□□□ -0.09
CDH13-210ENST00000567445 RTN4Q9NQC3 1192 aaKnown RBP14.48□□□□□ -0.09
CDH13-210ENST00000567445 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
CDH13-210ENST00000567445 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
CDH13-210ENST00000567445 PZPP20742 1482 aa14.47□□□□□ -0.09
CDH13-210ENST00000567445 TNRQ92752 1358 aa14.47□□□□□ -0.09
CDH13-210ENST00000567445 MAST1Q9Y2H9 1570 aa14.46□□□□□ -0.09
CDH13-210ENST00000567445 FBXO31Q5XUX0 539 aaPredicted RBP14.46□□□□□ -0.09
CDH13-210ENST00000567445 IQSEC2Q5JU85 1478 aa14.46□□□□□ -0.09
CDH13-210ENST00000567445 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
CDH13-210ENST00000567445 ZNF335Q9H4Z2 1342 aaPredicted RBP14.44□□□□□ -0.1
CDH13-210ENST00000567445 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
CDH13-210ENST00000567445 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
CDH13-210ENST00000567445 RNF17Q9BXT8 1623 aaKnown RBP14.43□□□□□ -0.1
CDH13-210ENST00000567445 EIF2AK4Q9P2K8 1649 aaKnown RBP14.41□□□□□ -0.1
CDH13-210ENST00000567445 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
CDH13-210ENST00000567445 ZC3H13Q5T200 1668 aaKnown RBP14.4□□□□□ -0.1
CDH13-210ENST00000567445 ABCC3O15438 1527 aa14.4□□□□□ -0.1
CDH13-210ENST00000567445 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
CDH13-210ENST00000567445 DUOX2Q9NRD8 1548 aa14.39□□□□□ -0.11
CDH13-210ENST00000567445 THEMISQ8N1K5 641 aaPredicted RBP14.38□□□□□ -0.11
CDH13-210ENST00000567445 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
CDH13-210ENST00000567445 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
CDH13-210ENST00000567445 POLR1AO95602 1720 aaPredicted RBP14.38□□□□□ -0.11
CDH13-210ENST00000567445 UGGT1Q9NYU2 1555 aa14.37□□□□□ -0.11
CDH13-210ENST00000567445 MROH1Q8NDA8 1641 aa14.37□□□□□ -0.11
CDH13-210ENST00000567445 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
CDH13-210ENST00000567445 ABCC5O15440 1437 aa14.37□□□□□ -0.11
CDH13-210ENST00000567445 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
CDH13-210ENST00000567445 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
CDH13-210ENST00000567445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDH13-210ENST00000567445 SPATA31D1Q6ZQQ2 1576 aa14.36□□□□□ -0.11
CDH13-210ENST00000567445 KIF15Q9NS87 1388 aa14.36□□□□□ -0.11
CDH13-210ENST00000567445 CROCC2H7BZ55 1655 aa14.35□□□□□ -0.11
CDH13-210ENST00000567445 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
CDH13-210ENST00000567445 ERVK-7P63135 1459 aa14.35□□□□□ -0.11
CDH13-210ENST00000567445 RRP7BPQ9NSQ0 103 aa14.34□□□□□ -0.11
CDH13-210ENST00000567445 DAPK1P53355 1430 aa14.34□□□□□ -0.11
CDH13-210ENST00000567445 ERBINQ96RT1 1412 aa14.34□□□□□ -0.11
CDH13-210ENST00000567445 UBAP1LF5GYI3 381 aa14.33□□□□□ -0.12
CDH13-210ENST00000567445 CEP152O94986 1710 aa14.33□□□□□ -0.12
CDH13-210ENST00000567445 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms