RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 DUOX2Q9NRD8 1548 aa28.1■■■□□ 2.09
COMMD4-218ENST00000567377 DAPK1P53355 1430 aa28.09■■■□□ 2.09
COMMD4-218ENST00000567377 EIF2AK4Q9P2K8 1649 aaKnown RBP28.08■■■□□ 2.09
COMMD4-218ENST00000567377 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
COMMD4-218ENST00000567377 KIF15Q9NS87 1388 aa28.06■■■□□ 2.08
COMMD4-218ENST00000567377 RNF17Q9BXT8 1623 aaKnown RBP28.05■■■□□ 2.08
COMMD4-218ENST00000567377 CROCC2H7BZ55 1655 aa28.04■■■□□ 2.08
COMMD4-218ENST00000567377 ANKRD30AQ9BXX3 1397 aa28.04■■■□□ 2.08
COMMD4-218ENST00000567377 PZPP20742 1482 aa28.03■■■□□ 2.08
COMMD4-218ENST00000567377 ERBINQ96RT1 1412 aa28.02■■■□□ 2.08
COMMD4-218ENST00000567377 ILDR1Q86SU0 546 aaPredicted RBP28.02■■■□□ 2.08
COMMD4-218ENST00000567377 RRP7BPQ9NSQ0 103 aa28.02■■■□□ 2.08
COMMD4-218ENST00000567377 FAM50AQ14320 339 aaKnown RBP28■■■□□ 2.07
COMMD4-218ENST00000567377 PTPRTO14522 1441 aa28■■■□□ 2.07
COMMD4-218ENST00000567377 STRCQ7RTU9 1775 aa27.99■■■□□ 2.07
COMMD4-218ENST00000567377 NCOA1Q15788 1441 aa27.99■■■□□ 2.07
COMMD4-218ENST00000567377 TNRQ92752 1358 aa27.98■■■□□ 2.07
COMMD4-218ENST00000567377 ZNF142P52746 1687 aaPredicted RBP27.97■■■□□ 2.07
COMMD4-218ENST00000567377 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
COMMD4-218ENST00000567377 MYO3AQ8NEV4 1616 aa27.97■■■□□ 2.07
COMMD4-218ENST00000567377 FBXO31Q5XUX0 539 aaPredicted RBP27.96■■■□□ 2.07
COMMD4-218ENST00000567377 CHIC2Q9UKJ5 165 aa27.96■■■□□ 2.07
COMMD4-218ENST00000567377 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.07
COMMD4-218ENST00000567377 CEP170BQ9Y4F5 1589 aaPredicted RBP27.95■■■□□ 2.07
COMMD4-218ENST00000567377 PKD2Q13563 968 aa27.95■■■□□ 2.06
COMMD4-218ENST00000567377 FBXO41Q8TF61 875 aa27.95■■■□□ 2.06
COMMD4-218ENST00000567377 ABCC3O15438 1527 aa27.95■■■□□ 2.06
COMMD4-218ENST00000567377 CAMSAP1Q5T5Y3 1602 aa27.94■■■□□ 2.06
COMMD4-218ENST00000567377 PLA2R1Q13018 1463 aa27.94■■■□□ 2.06
COMMD4-218ENST00000567377 ADGRL2O95490 1459 aa27.92■■■□□ 2.06
COMMD4-218ENST00000567377 KANK1Q14678 1352 aa27.91■■■□□ 2.06
COMMD4-218ENST00000567377 NLRP1Q9C000 1473 aa27.9■■■□□ 2.06
COMMD4-218ENST00000567377 MROH1Q8NDA8 1641 aa27.9■■■□□ 2.06
COMMD4-218ENST00000567377 PRDM15P57071 1507 aaPredicted RBP27.88■■■□□ 2.05
COMMD4-218ENST00000567377 CERKQ8TCT0 537 aa27.88■■■□□ 2.05
COMMD4-218ENST00000567377 ARHGAP31Q2M1Z3 1444 aa27.86■■■□□ 2.05
COMMD4-218ENST00000567377 THEMISQ8N1K5 641 aaPredicted RBP27.86■■■□□ 2.05
COMMD4-218ENST00000567377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.86■■■□□ 2.05
COMMD4-218ENST00000567377 SPATA31D1Q6ZQQ2 1576 aa27.83■■■□□ 2.05
COMMD4-218ENST00000567377 DEPDC5O75140 1603 aa27.83■■■□□ 2.05
COMMD4-218ENST00000567377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.83■■■□□ 2.05
COMMD4-218ENST00000567377 NCKAP5LQ9HCH0 1330 aa27.83■■■□□ 2.05
COMMD4-218ENST00000567377 ERVK-7P63135 1459 aa27.81■■■□□ 2.04
COMMD4-218ENST00000567377 ANKRD50Q9ULJ7 1429 aa27.8■■■□□ 2.04
COMMD4-218ENST00000567377 CEP152O94986 1710 aa27.79■■■□□ 2.04
COMMD4-218ENST00000567377 ROCK1Q13464 1354 aa27.79■■■□□ 2.04
COMMD4-218ENST00000567377 ANKLE2Q86XL3 938 aa27.77■■■□□ 2.04
COMMD4-218ENST00000567377 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
COMMD4-218ENST00000567377 LMTK2Q8IWU2 1503 aa27.77■■■□□ 2.04
COMMD4-218ENST00000567377 VWDEQ8N2E2 1590 aa27.74■■■□□ 2.03
COMMD4-218ENST00000567377 PPARGC1BQ86YN6 1023 aaKnown RBP27.74■■■□□ 2.03
COMMD4-218ENST00000567377 CFAP65Q6ZU64 1925 aaKnown RBP27.71■■■□□ 2.03
COMMD4-218ENST00000567377 LTBP4Q8N2S1 1624 aa27.67■■■□□ 2.02
COMMD4-218ENST00000567377 IQSEC2Q5JU85 1478 aa27.66■■■□□ 2.02
COMMD4-218ENST00000567377 POLR1AO95602 1720 aaPredicted RBP27.65■■■□□ 2.02
COMMD4-218ENST00000567377 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
COMMD4-218ENST00000567377 ITGAEP38570 1179 aa27.64■■■□□ 2.02
COMMD4-218ENST00000567377 MED14O60244 1454 aa27.64■■■□□ 2.01
COMMD4-218ENST00000567377 RPRD2Q5VT52 1461 aaKnown RBP27.64■■■□□ 2.01
COMMD4-218ENST00000567377 EFCAB6Q5THR3 1501 aa27.62■■■□□ 2.01
COMMD4-218ENST00000567377 ZNF335Q9H4Z2 1342 aaPredicted RBP27.62■■■□□ 2.01
COMMD4-218ENST00000567377 SLC52A1Q9NWF4 448 aa27.61■■■□□ 2.01
COMMD4-218ENST00000567377 NEURL4Q96JN8 1562 aa27.6■■■□□ 2.01
COMMD4-218ENST00000567377 NPHP4O75161 1426 aaPredicted RBP27.59■■■□□ 2.01
COMMD4-218ENST00000567377 NOS1P29475 1434 aa27.59■■■□□ 2.01
COMMD4-218ENST00000567377 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
COMMD4-218ENST00000567377 UBR1Q8IWV7 1749 aa27.58■■■□□ 2.01
COMMD4-218ENST00000567377 UNC13BO14795 1591 aa27.57■■■□□ 2
COMMD4-218ENST00000567377 EID1Q9Y6B2 187 aa27.57■■■□□ 2
COMMD4-218ENST00000567377 IDI1Q13907 227 aa27.56■■■□□ 2
COMMD4-218ENST00000567377 SLIT1O75093 1534 aa27.55■■■□□ 2
COMMD4-218ENST00000567377 TET3O43151 1660 aa27.55■■■□□ 2
COMMD4-218ENST00000567377 KDM5AP29375 1690 aaKnown RBP27.54■■■□□ 2
COMMD4-218ENST00000567377 ARHGAP23Q9P227 1491 aa27.54■■■□□ 2
COMMD4-218ENST00000567377 TXNDC2Q86VQ3 553 aa27.53■■■□□ 2
COMMD4-218ENST00000567377 SCAF11Q99590 1463 aaKnown RBP27.52■■■□□ 2
COMMD4-218ENST00000567377 NUP155O75694 1391 aa27.51■■□□□ 1.99
COMMD4-218ENST00000567377 TMEM2Q9UHN6 1383 aa27.5■■□□□ 1.99
COMMD4-218ENST00000567377 PIK3C2BO00750 1634 aa27.5■■□□□ 1.99
COMMD4-218ENST00000567377 CPS1P31327 1500 aa27.5■■□□□ 1.99
COMMD4-218ENST00000567377 IQGAP1P46940 1657 aa27.49■■□□□ 1.99
COMMD4-218ENST00000567377 GCC2Q8IWJ2 1684 aa27.49■■□□□ 1.99
COMMD4-218ENST00000567377 SYNMO15061 1565 aa27.49■■□□□ 1.99
COMMD4-218ENST00000567377 LTKP29376 864 aa27.47■■□□□ 1.99
COMMD4-218ENST00000567377 IQGAP3Q86VI3 1631 aa27.47■■□□□ 1.99
COMMD4-218ENST00000567377 HDGFP51858 240 aaKnown RBP27.44■■□□□ 1.98
COMMD4-218ENST00000567377 ADGRB3O60242 1522 aa27.42■■□□□ 1.98
COMMD4-218ENST00000567377 NAIPQ13075 1403 aa27.4■■□□□ 1.98
COMMD4-218ENST00000567377 E9PCH4 1651 aa27.38■■□□□ 1.97
COMMD4-218ENST00000567377 UBAP1LF5GYI3 381 aa27.38■■□□□ 1.97
COMMD4-218ENST00000567377 HFM1A2PYH4 1435 aa27.36■■□□□ 1.97
COMMD4-218ENST00000567377 TOM1O60784 492 aa27.34■■□□□ 1.97
COMMD4-218ENST00000567377 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.33■■□□□ 1.97
COMMD4-218ENST00000567377 TMEM131LA2VDJ0 1609 aa27.3■■□□□ 1.96
COMMD4-218ENST00000567377 CHGAP10645 457 aaKnown RBP27.29■■□□□ 1.96
COMMD4-218ENST00000567377 ZFYVE9O95405 1425 aa27.28■■□□□ 1.96
COMMD4-218ENST00000567377 RIMS2Q9UQ26 1411 aa27.27■■□□□ 1.96
COMMD4-218ENST00000567377 PPP1R15AO75807 674 aaPredicted RBP27.27■■□□□ 1.96
COMMD4-218ENST00000567377 PLEKHG1Q9ULL1 1385 aa27.26■■□□□ 1.95
COMMD4-218ENST00000567377 ACIN1Q9UKV3 1341 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms