RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
KARS-208ENST00000566772 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
KARS-208ENST00000566772 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
KARS-208ENST00000566772 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
KARS-208ENST00000566772 CLCN1P35523 988 aa10.17□□□□□ -0.78
KARS-208ENST00000566772 MDM2Q00987 491 aaPredicted RBP10.17□□□□□ -0.78
KARS-208ENST00000566772 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
KARS-208ENST00000566772 G3V3G9 751 aa10.16□□□□□ -0.78
KARS-208ENST00000566772 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
KARS-208ENST00000566772 IRX5P78411 483 aaPredicted RBP10.16□□□□□ -0.78
KARS-208ENST00000566772 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
KARS-208ENST00000566772 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
KARS-208ENST00000566772 PHOX2BQ99453 314 aa10.16□□□□□ -0.78
KARS-208ENST00000566772 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
KARS-208ENST00000566772 NPDC1Q9NQX5 325 aaPredicted RBP10.16□□□□□ -0.78
KARS-208ENST00000566772 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
KARS-208ENST00000566772 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
KARS-208ENST00000566772 GPCPD1Q9NPB8 672 aa10.15□□□□□ -0.78
KARS-208ENST00000566772 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
KARS-208ENST00000566772 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
KARS-208ENST00000566772 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
KARS-208ENST00000566772 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
KARS-208ENST00000566772 RAD21O60216 631 aa10.12□□□□□ -0.79
KARS-208ENST00000566772 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
KARS-208ENST00000566772 CCDC97Q96F63 343 aaPredicted RBP10.11□□□□□ -0.79
KARS-208ENST00000566772 SERPINA10Q9UK55 444 aa10.11□□□□□ -0.79
KARS-208ENST00000566772 TRAIPQ9BWF2 469 aa10.1□□□□□ -0.79
KARS-208ENST00000566772 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
KARS-208ENST00000566772 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
KARS-208ENST00000566772 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
KARS-208ENST00000566772 MAP3K7O43318 606 aa10.07□□□□□ -0.8
KARS-208ENST00000566772 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
KARS-208ENST00000566772 NLRP7Q8WX94 980 aa10.07□□□□□ -0.8
KARS-208ENST00000566772 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
KARS-208ENST00000566772 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
KARS-208ENST00000566772 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
KARS-208ENST00000566772 SNRKQ9NRH2 765 aa10.06□□□□□ -0.8
KARS-208ENST00000566772 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
KARS-208ENST00000566772 CLCN6P51797 869 aa10.05□□□□□ -0.8
KARS-208ENST00000566772 IER5LQ5T953 404 aa10.05□□□□□ -0.8
KARS-208ENST00000566772 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
KARS-208ENST00000566772 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
KARS-208ENST00000566772 PTCD2Q8WV60 388 aaKnown RBP10.05□□□□□ -0.8
KARS-208ENST00000566772 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
KARS-208ENST00000566772 EPAS1Q99814 870 aa10.05□□□□□ -0.8
KARS-208ENST00000566772 ATMINO43313 823 aaPredicted RBP10.04□□□□□ -0.8
KARS-208ENST00000566772 PHF14O94880 888 aa10.04□□□□□ -0.8
KARS-208ENST00000566772 PLCG2P16885 1265 aa10.04□□□□□ -0.8
KARS-208ENST00000566772 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
KARS-208ENST00000566772 AEBP1Q8IUX7 1158 aa10.03□□□□□ -0.8
KARS-208ENST00000566772 FBXO31Q5XUX0 539 aaPredicted RBP10.02□□□□□ -0.81
KARS-208ENST00000566772 METTL3Q86U44 580 aaKnown RBP10.02□□□□□ -0.81
KARS-208ENST00000566772 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
KARS-208ENST00000566772 RFC5P40937 340 aa10.01□□□□□ -0.81
KARS-208ENST00000566772 CLK2P49760 499 aaKnown RBP10.01□□□□□ -0.81
KARS-208ENST00000566772 BANK1Q8NDB2 785 aa10.01□□□□□ -0.81
KARS-208ENST00000566772 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
KARS-208ENST00000566772 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
KARS-208ENST00000566772 OATP04181 439 aa9.99□□□□□ -0.81
KARS-208ENST00000566772 ASTLQ6HA08 431 aaPredicted RBP9.99□□□□□ -0.81
KARS-208ENST00000566772 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
KARS-208ENST00000566772 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
KARS-208ENST00000566772 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
KARS-208ENST00000566772 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
KARS-208ENST00000566772 TYW1BQ6NUM6 668 aa9.96□□□□□ -0.82
KARS-208ENST00000566772 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
KARS-208ENST00000566772 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
KARS-208ENST00000566772 SLC34A2O95436 690 aa9.95□□□□□ -0.82
KARS-208ENST00000566772 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
KARS-208ENST00000566772 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
KARS-208ENST00000566772 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
KARS-208ENST00000566772 IRF5Q13568 498 aa9.94□□□□□ -0.82
KARS-208ENST00000566772 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
KARS-208ENST00000566772 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
KARS-208ENST00000566772 MTMR14Q8NCE2 650 aa9.92□□□□□ -0.82
KARS-208ENST00000566772 DIXDC1Q155Q3 683 aa9.91□□□□□ -0.82
KARS-208ENST00000566772 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
KARS-208ENST00000566772 GZF1Q9H116 711 aaPredicted RBP9.91□□□□□ -0.82
KARS-208ENST00000566772 SEC24BO95487 1268 aa9.9□□□□□ -0.82
KARS-208ENST00000566772 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
KARS-208ENST00000566772 TTC13Q8NBP0 860 aa9.89□□□□□ -0.83
KARS-208ENST00000566772 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
KARS-208ENST00000566772 SPIRE2Q8WWL2 714 aa9.89□□□□□ -0.83
KARS-208ENST00000566772 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
KARS-208ENST00000566772 POM121CA8CG34 1229 aa9.88□□□□□ -0.83
KARS-208ENST00000566772 PPP1R15AO75807 674 aaPredicted RBP9.88□□□□□ -0.83
KARS-208ENST00000566772 ABL2P42684 1182 aa9.88□□□□□ -0.83
KARS-208ENST00000566772 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
KARS-208ENST00000566772 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
KARS-208ENST00000566772 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
KARS-208ENST00000566772 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
KARS-208ENST00000566772 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
KARS-208ENST00000566772 ACIN1Q9UKV3 1341 aaKnown RBP9.86□□□□□ -0.83
KARS-208ENST00000566772 WWC1Q8IX03 1113 aa9.86□□□□□ -0.83
KARS-208ENST00000566772 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
KARS-208ENST00000566772 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
KARS-208ENST00000566772 SPTLC1O15269 473 aa9.85□□□□□ -0.83
KARS-208ENST00000566772 CSPP1Q1MSJ5 1256 aa9.85□□□□□ -0.83
KARS-208ENST00000566772 GLMNQ92990 594 aa9.85□□□□□ -0.83
KARS-208ENST00000566772 TBC1D2BQ9UPU7 963 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms