RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 CEP170BQ9Y4F5 1589 aaPredicted RBP43.6■■■■■ 4.57
UBFD1-206ENST00000566669 KDM5DQ9BY66 1539 aa43.6■■■■■ 4.57
UBFD1-206ENST00000566669 MYOM3Q5VTT5 1437 aa43.58■■■■■ 4.57
UBFD1-206ENST00000566669 WASHC2CQ9Y4E1 1318 aa43.56■■■■■ 4.56
UBFD1-206ENST00000566669 KANK4Q5T7N3 995 aaPredicted RBP43.56■■■■■ 4.56
UBFD1-206ENST00000566669 APLP2Q06481 763 aa43.55■■■■■ 4.56
UBFD1-206ENST00000566669 MAST1Q9Y2H9 1570 aa43.54■■■■■ 4.56
UBFD1-206ENST00000566669 PZPP20742 1482 aa43.52■■■■■ 4.56
UBFD1-206ENST00000566669 A2ML1A8K2U0 1454 aa43.51■■■■■ 4.56
UBFD1-206ENST00000566669 IQSEC2Q5JU85 1478 aa43.51■■■■■ 4.56
UBFD1-206ENST00000566669 TCOF1Q13428 1488 aaKnown RBP43.48■■■■■ 4.55
UBFD1-206ENST00000566669 TNRQ92752 1358 aa43.46■■■■■ 4.55
UBFD1-206ENST00000566669 LTBP4Q8N2S1 1624 aa43.45■■■■■ 4.55
UBFD1-206ENST00000566669 NCKAP5LQ9HCH0 1330 aa43.45■■■■■ 4.55
UBFD1-206ENST00000566669 EIF2AK4Q9P2K8 1649 aaKnown RBP43.39■■■■■ 4.54
UBFD1-206ENST00000566669 RNF17Q9BXT8 1623 aaKnown RBP43.38■■■■■ 4.54
UBFD1-206ENST00000566669 DNMT1P26358 1616 aaKnown RBP43.37■■■■■ 4.53
UBFD1-206ENST00000566669 FBXO31Q5XUX0 539 aaPredicted RBP43.37■■■■■ 4.53
UBFD1-206ENST00000566669 NLRP1Q9C000 1473 aa43.35■■■■■ 4.53
UBFD1-206ENST00000566669 ZC3H13Q5T200 1668 aaKnown RBP43.33■■■■■ 4.53
UBFD1-206ENST00000566669 DUOX2Q9NRD8 1548 aa43.31■■■■■ 4.52
UBFD1-206ENST00000566669 SHANK2Q9UPX8 1470 aa43.31■■■■■ 4.52
UBFD1-206ENST00000566669 THEMISQ8N1K5 641 aaPredicted RBP43.29■■■■■ 4.52
UBFD1-206ENST00000566669 ABCC3O15438 1527 aa43.26■■■■■ 4.52
UBFD1-206ENST00000566669 ZNF335Q9H4Z2 1342 aaPredicted RBP43.24■■■■■ 4.51
UBFD1-206ENST00000566669 PTPN23Q9H3S7 1636 aa43.22■■■■■ 4.51
UBFD1-206ENST00000566669 ANKLE2Q86XL3 938 aa43.21■■■■■ 4.51
UBFD1-206ENST00000566669 KIF15Q9NS87 1388 aa43.2■■■■■ 4.51
UBFD1-206ENST00000566669 ERBINQ96RT1 1412 aa43.2■■■■■ 4.51
UBFD1-206ENST00000566669 ABCC5O15440 1437 aa43.19■■■■■ 4.5
UBFD1-206ENST00000566669 FGD6Q6ZV73 1430 aa43.18■■■■■ 4.5
UBFD1-206ENST00000566669 UGGT1Q9NYU2 1555 aa43.18■■■■■ 4.5
UBFD1-206ENST00000566669 SPATA31D1Q6ZQQ2 1576 aa43.16■■■■■ 4.5
UBFD1-206ENST00000566669 POLR1AO95602 1720 aaPredicted RBP43.15■■■■■ 4.5
UBFD1-206ENST00000566669 CROCC2H7BZ55 1655 aa43.14■■■■■ 4.5
UBFD1-206ENST00000566669 MROH1Q8NDA8 1641 aa43.14■■■■■ 4.5
UBFD1-206ENST00000566669 DAPK1P53355 1430 aa43.13■■■■■ 4.49
UBFD1-206ENST00000566669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.12■■■■■ 4.49
UBFD1-206ENST00000566669 ERVK-7P63135 1459 aa43.1■■■■■ 4.49
UBFD1-206ENST00000566669 RRP7BPQ9NSQ0 103 aa43.08■■■■■ 4.49
UBFD1-206ENST00000566669 NEURL4Q96JN8 1562 aa43.07■■■■■ 4.49
UBFD1-206ENST00000566669 PRDM15P57071 1507 aaPredicted RBP43.07■■■■■ 4.49
UBFD1-206ENST00000566669 ARHGAP31Q2M1Z3 1444 aa43.07■■■■■ 4.49
UBFD1-206ENST00000566669 DEPDC5O75140 1603 aa43.07■■■■■ 4.48
UBFD1-206ENST00000566669 MED14O60244 1454 aa43.06■■■■■ 4.48
UBFD1-206ENST00000566669 ANKRD30AQ9BXX3 1397 aa43.06■■■■■ 4.48
UBFD1-206ENST00000566669 CPS1P31327 1500 aa43.04■■■■■ 4.48
UBFD1-206ENST00000566669 KANK1Q14678 1352 aa43.03■■■■■ 4.48
UBFD1-206ENST00000566669 UBAP1LF5GYI3 381 aa43.01■■■■■ 4.48
UBFD1-206ENST00000566669 NPHP4O75161 1426 aaPredicted RBP42.99■■■■■ 4.47
UBFD1-206ENST00000566669 CEP152O94986 1710 aa42.98■■■■■ 4.47
UBFD1-206ENST00000566669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.89■■■■■ 4.462e-18■□□□□ 10.2
UBFD1-206ENST00000566669 ADGRL2O95490 1459 aa42.87■■■■■ 4.45
UBFD1-206ENST00000566669 CHIC2Q9UKJ5 165 aa42.87■■■■■ 4.45
UBFD1-206ENST00000566669 LMTK2Q8IWU2 1503 aa42.86■■■■■ 4.45
UBFD1-206ENST00000566669 IQGAP1P46940 1657 aa42.86■■■■■ 4.45
UBFD1-206ENST00000566669 TOM1O60784 492 aa42.84■■■■■ 4.45
UBFD1-206ENST00000566669 VWDEQ8N2E2 1590 aa42.84■■■■■ 4.45
UBFD1-206ENST00000566669 DISP3Q9P2K9 1392 aa42.84■■■■■ 4.45
UBFD1-206ENST00000566669 UBR1Q8IWV7 1749 aa42.82■■■■■ 4.44
UBFD1-206ENST00000566669 FAM50AQ14320 339 aaKnown RBP42.79■■■■■ 4.44
UBFD1-206ENST00000566669 SCAF11Q99590 1463 aaKnown RBP42.79■■■■■ 4.44
UBFD1-206ENST00000566669 SLIT1O75093 1534 aa42.78■■■■■ 4.44
UBFD1-206ENST00000566669 ARHGAP23Q9P227 1491 aa42.77■■■■■ 4.44
UBFD1-206ENST00000566669 CFAP65Q6ZU64 1925 aaKnown RBP42.76■■■■■ 4.44
UBFD1-206ENST00000566669 EID1Q9Y6B2 187 aa42.76■■■■■ 4.44
UBFD1-206ENST00000566669 TXNDC2Q86VQ3 553 aa42.71■■■■■ 4.43
UBFD1-206ENST00000566669 STAG3Q9UJ98 1225 aa42.71■■■■■ 4.43
UBFD1-206ENST00000566669 ANKRD50Q9ULJ7 1429 aa42.7■■■■■ 4.43
UBFD1-206ENST00000566669 KDM5AP29375 1690 aaKnown RBP42.7■■■■■ 4.43
UBFD1-206ENST00000566669 EFCAB6Q5THR3 1501 aa42.66■■■■■ 4.42
UBFD1-206ENST00000566669 TMEM2Q9UHN6 1383 aa42.65■■■■■ 4.42
UBFD1-206ENST00000566669 RPRD2Q5VT52 1461 aaKnown RBP42.63■■■■■ 4.42
UBFD1-206ENST00000566669 LTKP29376 864 aa42.63■■■■■ 4.41
UBFD1-206ENST00000566669 SLC52A1Q9NWF4 448 aa42.63■■■■■ 4.41
UBFD1-206ENST00000566669 SYNMO15061 1565 aa42.63■■■■■ 4.41
UBFD1-206ENST00000566669 PIK3C2BO00750 1634 aa42.63■■■■■ 4.41
UBFD1-206ENST00000566669 NOS1P29475 1434 aa42.63■■■■■ 4.41
UBFD1-206ENST00000566669 SCAF1Q9H7N4 1312 aaKnown RBP42.61■■■■■ 4.41
UBFD1-206ENST00000566669 IDI1Q13907 227 aa42.6■■■■■ 4.41
UBFD1-206ENST00000566669 PIP4K2BP78356 416 aa42.58■■■■■ 4.41
UBFD1-206ENST00000566669 LRRC7Q96NW7 1537 aa42.57■■■■■ 4.41
UBFD1-206ENST00000566669 ROCK1Q13464 1354 aa42.55■■■■■ 4.4
UBFD1-206ENST00000566669 HSPA1LP34931 641 aa42.49■■■■■ 4.39
UBFD1-206ENST00000566669 STRCP1A6NGW2 1772 aa42.47■■■■■ 4.39
UBFD1-206ENST00000566669 ADGRB3O60242 1522 aa42.47■■■■■ 4.39
UBFD1-206ENST00000566669 TET3O43151 1660 aa42.45■■■■■ 4.39
UBFD1-206ENST00000566669 ILDR2Q71H61 639 aa42.44■■■■■ 4.38
UBFD1-206ENST00000566669 HDGFP51858 240 aaKnown RBP42.42■■■■■ 4.38
UBFD1-206ENST00000566669 UNC13BO14795 1591 aa42.41■■■■■ 4.38
UBFD1-206ENST00000566669 SOCS7O14512 581 aa42.38■■■■■ 4.37
UBFD1-206ENST00000566669 ALKQ9UM73 1620 aa42.38■■■■■ 4.37
UBFD1-206ENST00000566669 GCC2Q8IWJ2 1684 aa42.35■■■■■ 4.37
UBFD1-206ENST00000566669 KCNA6P17658 529 aa42.34■■■■■ 4.37
UBFD1-206ENST00000566669 IQGAP3Q86VI3 1631 aa42.25■■■■■ 4.35
UBFD1-206ENST00000566669 SLC26A8Q96RN1 970 aa42.25■■■■■ 4.35
UBFD1-206ENST00000566669 ZFYVE9O95405 1425 aa42.24■■■■■ 4.35
UBFD1-206ENST00000566669 ABCF1Q8NE71 845 aaKnown RBP eCLIP42.24■■■■■ 4.35
UBFD1-206ENST00000566669 BCANQ96GW7 911 aa42.24■■■■■ 4.35
UBFD1-206ENST00000566669 PLEKHG1Q9ULL1 1385 aa42.24■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms