RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ADGRL2O95490 1459 aa17.45■□□□□ 0.38
KARS-207ENST00000566560 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
KARS-207ENST00000566560 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
KARS-207ENST00000566560 ITGAEP38570 1179 aa17.43■□□□□ 0.38
KARS-207ENST00000566560 ATP10AO60312 1499 aa17.43■□□□□ 0.38
KARS-207ENST00000566560 SIGLEC1Q9BZZ2 1709 aa17.42■□□□□ 0.38
KARS-207ENST00000566560 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
KARS-207ENST00000566560 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
KARS-207ENST00000566560 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
KARS-207ENST00000566560 A2MP01023 1474 aa17.4■□□□□ 0.38
KARS-207ENST00000566560 CHIC2Q9UKJ5 165 aa17.4■□□□□ 0.38
KARS-207ENST00000566560 DUOX2Q9NRD8 1548 aa17.39■□□□□ 0.37
KARS-207ENST00000566560 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
KARS-207ENST00000566560 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
KARS-207ENST00000566560 NCOA1Q15788 1441 aa17.38■□□□□ 0.37
KARS-207ENST00000566560 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
KARS-207ENST00000566560 AGLP35573 1532 aa17.36■□□□□ 0.37
KARS-207ENST00000566560 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
KARS-207ENST00000566560 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
KARS-207ENST00000566560 DHX29Q7Z478 1369 aaKnown RBP17.33■□□□□ 0.36
KARS-207ENST00000566560 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.36
KARS-207ENST00000566560 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
KARS-207ENST00000566560 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
KARS-207ENST00000566560 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
KARS-207ENST00000566560 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
KARS-207ENST00000566560 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
KARS-207ENST00000566560 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
KARS-207ENST00000566560 NAIPQ13075 1403 aa17.29■□□□□ 0.36
KARS-207ENST00000566560 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
KARS-207ENST00000566560 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
KARS-207ENST00000566560 MROH1Q8NDA8 1641 aa17.27■□□□□ 0.36
KARS-207ENST00000566560 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
KARS-207ENST00000566560 UNC13BO14795 1591 aa17.26■□□□□ 0.35
KARS-207ENST00000566560 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
KARS-207ENST00000566560 MADDQ8WXG6 1647 aa17.25■□□□□ 0.35
KARS-207ENST00000566560 KIF3BO15066 747 aa17.24■□□□□ 0.35
KARS-207ENST00000566560 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
KARS-207ENST00000566560 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
KARS-207ENST00000566560 MLECQ14165 292 aa17.22■□□□□ 0.35
KARS-207ENST00000566560 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
KARS-207ENST00000566560 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.35
KARS-207ENST00000566560 CEP152O94986 1710 aa17.21■□□□□ 0.35
KARS-207ENST00000566560 CLTCQ00610 1675 aaKnown RBP17.21■□□□□ 0.35
KARS-207ENST00000566560 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
KARS-207ENST00000566560 GGT6Q6P531 493 aa17.19■□□□□ 0.34
KARS-207ENST00000566560 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
KARS-207ENST00000566560 ABCC3O15438 1527 aa17.18■□□□□ 0.34
KARS-207ENST00000566560 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
KARS-207ENST00000566560 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
KARS-207ENST00000566560 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
KARS-207ENST00000566560 KANK1Q14678 1352 aa17.16■□□□□ 0.34
KARS-207ENST00000566560 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
KARS-207ENST00000566560 CNTLNQ9NXG0 1405 aa17.15■□□□□ 0.34
KARS-207ENST00000566560 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
KARS-207ENST00000566560 TET3O43151 1660 aa17.13■□□□□ 0.33
KARS-207ENST00000566560 LMTK2Q8IWU2 1503 aa17.13■□□□□ 0.33
KARS-207ENST00000566560 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
KARS-207ENST00000566560 EFCAB6Q5THR3 1501 aa17.12■□□□□ 0.33
KARS-207ENST00000566560 C3P01024 1663 aa17.12■□□□□ 0.33
KARS-207ENST00000566560 NUP155O75694 1391 aa17.11■□□□□ 0.33
KARS-207ENST00000566560 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
KARS-207ENST00000566560 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
KARS-207ENST00000566560 CAPN15O75808 1086 aa17.09■□□□□ 0.33
KARS-207ENST00000566560 PCGF6Q9BYE7 350 aa17.09■□□□□ 0.33
KARS-207ENST00000566560 PTPRMP28827 1452 aa17.09■□□□□ 0.33
KARS-207ENST00000566560 PZPP20742 1482 aa17.08■□□□□ 0.32
KARS-207ENST00000566560 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.32
KARS-207ENST00000566560 E9PCH4 1651 aa17.07■□□□□ 0.32
KARS-207ENST00000566560 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
KARS-207ENST00000566560 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
KARS-207ENST00000566560 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
KARS-207ENST00000566560 NPATQ14207 1427 aa17.04■□□□□ 0.32
KARS-207ENST00000566560 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
KARS-207ENST00000566560 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
KARS-207ENST00000566560 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
KARS-207ENST00000566560 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.32
KARS-207ENST00000566560 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
KARS-207ENST00000566560 HRCP23327 699 aa17.01■□□□□ 0.31
KARS-207ENST00000566560 SPATA31D1Q6ZQQ2 1576 aa17.01■□□□□ 0.31
KARS-207ENST00000566560 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
KARS-207ENST00000566560 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
KARS-207ENST00000566560 CEBPAP49715 358 aaPredicted RBP16.98■□□□□ 0.31
KARS-207ENST00000566560 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
KARS-207ENST00000566560 SYNMO15061 1565 aa16.97■□□□□ 0.31
KARS-207ENST00000566560 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
KARS-207ENST00000566560 TRPM2O94759 1503 aa16.95■□□□□ 0.3
KARS-207ENST00000566560 NOS1P29475 1434 aa16.95■□□□□ 0.3
KARS-207ENST00000566560 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
KARS-207ENST00000566560 TNRQ92752 1358 aa16.94■□□□□ 0.3
KARS-207ENST00000566560 PKD2Q13563 968 aa16.94■□□□□ 0.3
KARS-207ENST00000566560 FBXO31Q5XUX0 539 aaPredicted RBP16.93■□□□□ 0.3
KARS-207ENST00000566560 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
KARS-207ENST00000566560 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
KARS-207ENST00000566560 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
KARS-207ENST00000566560 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
KARS-207ENST00000566560 PTPRTO14522 1441 aa16.91■□□□□ 0.3
KARS-207ENST00000566560 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
KARS-207ENST00000566560 NLRP1Q9C000 1473 aa16.9■□□□□ 0.3
KARS-207ENST00000566560 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.3
KARS-207ENST00000566560 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms