RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
UBR1-206ENST00000566493 MYO3AQ8NEV4 1616 aa18.84■□□□□ 0.61
UBR1-206ENST00000566493 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
UBR1-206ENST00000566493 MAP3K1Q13233 1512 aa18.83■□□□□ 0.6
UBR1-206ENST00000566493 ZNF142P52746 1687 aaPredicted RBP18.82■□□□□ 0.6
UBR1-206ENST00000566493 CEP170BQ9Y4F5 1589 aaPredicted RBP18.81■□□□□ 0.6
UBR1-206ENST00000566493 NCKAP5LQ9HCH0 1330 aa18.8■□□□□ 0.6
UBR1-206ENST00000566493 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
UBR1-206ENST00000566493 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
UBR1-206ENST00000566493 APLP2Q06481 763 aa18.79■□□□□ 0.6
UBR1-206ENST00000566493 PKD2Q13563 968 aa18.79■□□□□ 0.6
UBR1-206ENST00000566493 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
UBR1-206ENST00000566493 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
UBR1-206ENST00000566493 FAM135AQ9P2D6 1515 aa18.78■□□□□ 0.6
UBR1-206ENST00000566493 PLA2R1Q13018 1463 aa18.77■□□□□ 0.6
UBR1-206ENST00000566493 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
UBR1-206ENST00000566493 MIA2Q96PC5 1412 aa18.76■□□□□ 0.59
UBR1-206ENST00000566493 A2ML1A8K2U0 1454 aa18.75■□□□□ 0.59
UBR1-206ENST00000566493 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
UBR1-206ENST00000566493 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
UBR1-206ENST00000566493 TNRQ92752 1358 aa18.74■□□□□ 0.59
UBR1-206ENST00000566493 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
UBR1-206ENST00000566493 PZPP20742 1482 aa18.73■□□□□ 0.59
UBR1-206ENST00000566493 TCOF1Q13428 1488 aaKnown RBP18.72■□□□□ 0.59
UBR1-206ENST00000566493 DNMT1P26358 1616 aaKnown RBP18.72■□□□□ 0.59
UBR1-206ENST00000566493 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
UBR1-206ENST00000566493 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
UBR1-206ENST00000566493 RNF17Q9BXT8 1623 aaKnown RBP18.68■□□□□ 0.58
UBR1-206ENST00000566493 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
UBR1-206ENST00000566493 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
UBR1-206ENST00000566493 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
UBR1-206ENST00000566493 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
UBR1-206ENST00000566493 DUOX2Q9NRD8 1548 aa18.65■□□□□ 0.58
UBR1-206ENST00000566493 POLR1AO95602 1720 aaPredicted RBP18.65■□□□□ 0.58
UBR1-206ENST00000566493 ABCC3O15438 1527 aa18.64■□□□□ 0.58
UBR1-206ENST00000566493 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
UBR1-206ENST00000566493 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
UBR1-206ENST00000566493 UGGT1Q9NYU2 1555 aa18.62■□□□□ 0.57
UBR1-206ENST00000566493 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
UBR1-206ENST00000566493 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
UBR1-206ENST00000566493 ABCC5O15440 1437 aa18.61■□□□□ 0.57
UBR1-206ENST00000566493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.57
UBR1-206ENST00000566493 KIF15Q9NS87 1388 aa18.61■□□□□ 0.57
UBR1-206ENST00000566493 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
UBR1-206ENST00000566493 UBAP1LF5GYI3 381 aa18.6■□□□□ 0.57
UBR1-206ENST00000566493 CEP152O94986 1710 aa18.6■□□□□ 0.57
UBR1-206ENST00000566493 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
UBR1-206ENST00000566493 MROH1Q8NDA8 1641 aa18.59■□□□□ 0.57
UBR1-206ENST00000566493 SPATA31D1Q6ZQQ2 1576 aa18.59■□□□□ 0.57
UBR1-206ENST00000566493 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
UBR1-206ENST00000566493 DAPK1P53355 1430 aa18.58■□□□□ 0.57
UBR1-206ENST00000566493 CFAP65Q6ZU64 1925 aaKnown RBP18.58■□□□□ 0.56
UBR1-206ENST00000566493 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
UBR1-206ENST00000566493 ERVK-7P63135 1459 aa18.57■□□□□ 0.56
UBR1-206ENST00000566493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
UBR1-206ENST00000566493 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
UBR1-206ENST00000566493 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
UBR1-206ENST00000566493 NPHP4O75161 1426 aaPredicted RBP18.55■□□□□ 0.56
UBR1-206ENST00000566493 KANK1Q14678 1352 aa18.55■□□□□ 0.56
UBR1-206ENST00000566493 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
UBR1-206ENST00000566493 CPS1P31327 1500 aa18.54■□□□□ 0.56
UBR1-206ENST00000566493 CHIC2Q9UKJ5 165 aa18.54■□□□□ 0.56
UBR1-206ENST00000566493 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
UBR1-206ENST00000566493 MED14O60244 1454 aa18.52■□□□□ 0.56
UBR1-206ENST00000566493 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
UBR1-206ENST00000566493 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
UBR1-206ENST00000566493 FAM50AQ14320 339 aaKnown RBP18.5■□□□□ 0.55
UBR1-206ENST00000566493 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
UBR1-206ENST00000566493 TOM1O60784 492 aa18.49■□□□□ 0.55
UBR1-206ENST00000566493 VWDEQ8N2E2 1590 aa18.48■□□□□ 0.55
UBR1-206ENST00000566493 PIP4K2BP78356 416 aa18.46■□□□□ 0.55
UBR1-206ENST00000566493 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
UBR1-206ENST00000566493 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
UBR1-206ENST00000566493 EID1Q9Y6B2 187 aa18.45■□□□□ 0.54
UBR1-206ENST00000566493 SCAF11Q99590 1463 aaKnown RBP18.44■□□□□ 0.54
UBR1-206ENST00000566493 ADGRL2O95490 1459 aa18.43■□□□□ 0.54
UBR1-206ENST00000566493 LMTK2Q8IWU2 1503 aa18.43■□□□□ 0.54
UBR1-206ENST00000566493 SLIT1O75093 1534 aa18.42■□□□□ 0.54
UBR1-206ENST00000566493 PIK3C2BO00750 1634 aa18.41■□□□□ 0.54
UBR1-206ENST00000566493 ARHGAP23Q9P227 1491 aa18.4■□□□□ 0.54
UBR1-206ENST00000566493 LTKP29376 864 aa18.4■□□□□ 0.54
UBR1-206ENST00000566493 ILDR2Q71H61 639 aa18.39■□□□□ 0.53
UBR1-206ENST00000566493 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.53
UBR1-206ENST00000566493 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
UBR1-206ENST00000566493 HSPA1LP34931 641 aa18.38■□□□□ 0.53
UBR1-206ENST00000566493 IDI1Q13907 227 aa18.38■□□□□ 0.53
UBR1-206ENST00000566493 TMEM2Q9UHN6 1383 aa18.38■□□□□ 0.53
UBR1-206ENST00000566493 EFCAB6Q5THR3 1501 aa18.38■□□□□ 0.53
UBR1-206ENST00000566493 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
UBR1-206ENST00000566493 SYNMO15061 1565 aa18.37■□□□□ 0.53
UBR1-206ENST00000566493 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
UBR1-206ENST00000566493 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
UBR1-206ENST00000566493 NOS1P29475 1434 aa18.34■□□□□ 0.53
UBR1-206ENST00000566493 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
UBR1-206ENST00000566493 SOCS7O14512 581 aa18.32■□□□□ 0.52
UBR1-206ENST00000566493 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
UBR1-206ENST00000566493 ADGRB3O60242 1522 aa18.31■□□□□ 0.52
UBR1-206ENST00000566493 BCANQ96GW7 911 aa18.3■□□□□ 0.52
UBR1-206ENST00000566493 TET3O43151 1660 aa18.3■□□□□ 0.52
UBR1-206ENST00000566493 ALKQ9UM73 1620 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms