RNA–Protein interactions for RNA: ENST00000566233.5

RAB11A-205, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-205ENST00000566233 SHANK2Q9UPX8 1470 aa18.73■□□□□ 0.59
RAB11A-205ENST00000566233 KIF3BO15066 747 aa18.73■□□□□ 0.59
RAB11A-205ENST00000566233 TCOF1Q13428 1488 aaKnown RBP18.72■□□□□ 0.59
RAB11A-205ENST00000566233 EIF2AK4Q9P2K8 1649 aaKnown RBP18.72■□□□□ 0.59
RAB11A-205ENST00000566233 DNMT1P26358 1616 aaKnown RBP18.71■□□□□ 0.58
RAB11A-205ENST00000566233 ABCC5O15440 1437 aa18.7■□□□□ 0.58
RAB11A-205ENST00000566233 NCOA1Q15788 1441 aa18.7■□□□□ 0.58
RAB11A-205ENST00000566233 CEP170BQ9Y4F5 1589 aaPredicted RBP18.7■□□□□ 0.58
RAB11A-205ENST00000566233 MROH1Q8NDA8 1641 aa18.69■□□□□ 0.58
RAB11A-205ENST00000566233 CAMSAP1Q5T5Y3 1602 aa18.68■□□□□ 0.58
RAB11A-205ENST00000566233 PZPP20742 1482 aa18.68■□□□□ 0.58
RAB11A-205ENST00000566233 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
RAB11A-205ENST00000566233 DAPK1P53355 1430 aa18.67■□□□□ 0.58
RAB11A-205ENST00000566233 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
RAB11A-205ENST00000566233 ABCC3O15438 1527 aa18.66■□□□□ 0.58
RAB11A-205ENST00000566233 KIF15Q9NS87 1388 aa18.65■□□□□ 0.58
RAB11A-205ENST00000566233 PTPRTO14522 1441 aa18.65■□□□□ 0.58
RAB11A-205ENST00000566233 WASHC2CQ9Y4E1 1318 aa18.64■□□□□ 0.57
RAB11A-205ENST00000566233 FBXO41Q8TF61 875 aa18.63■□□□□ 0.57
RAB11A-205ENST00000566233 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
RAB11A-205ENST00000566233 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
RAB11A-205ENST00000566233 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
RAB11A-205ENST00000566233 PLA2R1Q13018 1463 aa18.62■□□□□ 0.57
RAB11A-205ENST00000566233 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
RAB11A-205ENST00000566233 CEP152O94986 1710 aa18.61■□□□□ 0.57
RAB11A-205ENST00000566233 TNRQ92752 1358 aa18.61■□□□□ 0.57
RAB11A-205ENST00000566233 FBXO31Q5XUX0 539 aaPredicted RBP18.61■□□□□ 0.57
RAB11A-205ENST00000566233 DEPDC5O75140 1603 aa18.59■□□□□ 0.57
RAB11A-205ENST00000566233 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.56
RAB11A-205ENST00000566233 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
RAB11A-205ENST00000566233 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
RAB11A-205ENST00000566233 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
RAB11A-205ENST00000566233 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
RAB11A-205ENST00000566233 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
RAB11A-205ENST00000566233 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
RAB11A-205ENST00000566233 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
RAB11A-205ENST00000566233 NCKAP5LQ9HCH0 1330 aa18.54■□□□□ 0.56
RAB11A-205ENST00000566233 POLR1AO95602 1720 aaPredicted RBP18.53■□□□□ 0.56
RAB11A-205ENST00000566233 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
RAB11A-205ENST00000566233 NEURL4Q96JN8 1562 aa18.52■□□□□ 0.56
RAB11A-205ENST00000566233 PKD2Q13563 968 aa18.51■□□□□ 0.55
RAB11A-205ENST00000566233 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
RAB11A-205ENST00000566233 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
RAB11A-205ENST00000566233 UGGT1Q9NYU2 1555 aa18.51■□□□□ 0.55
RAB11A-205ENST00000566233 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
RAB11A-205ENST00000566233 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
RAB11A-205ENST00000566233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB11A-205ENST00000566233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.54
RAB11A-205ENST00000566233 UBR1Q8IWV7 1749 aa18.45■□□□□ 0.54
RAB11A-205ENST00000566233 ZNF335Q9H4Z2 1342 aaPredicted RBP18.45■□□□□ 0.54
RAB11A-205ENST00000566233 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
RAB11A-205ENST00000566233 KANK1Q14678 1352 aa18.44■□□□□ 0.54
RAB11A-205ENST00000566233 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
RAB11A-205ENST00000566233 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
RAB11A-205ENST00000566233 IQSEC2Q5JU85 1478 aa18.43■□□□□ 0.54
RAB11A-205ENST00000566233 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
RAB11A-205ENST00000566233 THEMISQ8N1K5 641 aaPredicted RBP18.41■□□□□ 0.54
RAB11A-205ENST00000566233 MED14O60244 1454 aa18.4■□□□□ 0.54
RAB11A-205ENST00000566233 UNC13BO14795 1591 aa18.4■□□□□ 0.54
RAB11A-205ENST00000566233 SYNMO15061 1565 aa18.4■□□□□ 0.54
RAB11A-205ENST00000566233 PIK3C2BO00750 1634 aa18.39■□□□□ 0.53
RAB11A-205ENST00000566233 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
RAB11A-205ENST00000566233 ROCK1Q13464 1354 aa18.39■□□□□ 0.53
RAB11A-205ENST00000566233 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
RAB11A-205ENST00000566233 NPHP4O75161 1426 aaPredicted RBP18.38■□□□□ 0.53
RAB11A-205ENST00000566233 TET3O43151 1660 aa18.36■□□□□ 0.53
RAB11A-205ENST00000566233 SLIT1O75093 1534 aa18.36■□□□□ 0.53
RAB11A-205ENST00000566233 NOS1P29475 1434 aa18.36■□□□□ 0.53
RAB11A-205ENST00000566233 ARHGAP23Q9P227 1491 aa18.36■□□□□ 0.53
RAB11A-205ENST00000566233 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
RAB11A-205ENST00000566233 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
RAB11A-205ENST00000566233 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.53
RAB11A-205ENST00000566233 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
RAB11A-205ENST00000566233 CPS1P31327 1500 aa18.33■□□□□ 0.52
RAB11A-205ENST00000566233 RRBP1Q9P2E9 1410 aaKnown RBP18.32■□□□□ 0.52
RAB11A-205ENST00000566233 ADGRB3O60242 1522 aa18.32■□□□□ 0.52
RAB11A-205ENST00000566233 IQGAP3Q86VI3 1631 aa18.31■□□□□ 0.52
RAB11A-205ENST00000566233 ITGAEP38570 1179 aa18.31■□□□□ 0.52
RAB11A-205ENST00000566233 STRCP1A6NGW2 1772 aa18.29■□□□□ 0.52
RAB11A-205ENST00000566233 TMEM2Q9UHN6 1383 aa18.29■□□□□ 0.52
RAB11A-205ENST00000566233 E9PCH4 1651 aa18.28■□□□□ 0.52
RAB11A-205ENST00000566233 IDI1Q13907 227 aa18.28■□□□□ 0.52
RAB11A-205ENST00000566233 LTKP29376 864 aa18.27■□□□□ 0.52
RAB11A-205ENST00000566233 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
RAB11A-205ENST00000566233 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
RAB11A-205ENST00000566233 MYO5BQ9ULV0 1848 aa18.22■□□□□ 0.51
RAB11A-205ENST00000566233 UBAP1LF5GYI3 381 aa18.22■□□□□ 0.51
RAB11A-205ENST00000566233 SLC52A1Q9NWF4 448 aa18.22■□□□□ 0.51
RAB11A-205ENST00000566233 TMEM131LA2VDJ0 1609 aa18.22■□□□□ 0.51
RAB11A-205ENST00000566233 NUP155O75694 1391 aa18.21■□□□□ 0.51
RAB11A-205ENST00000566233 EID1Q9Y6B2 187 aa18.21■□□□□ 0.51
RAB11A-205ENST00000566233 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
RAB11A-205ENST00000566233 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
RAB11A-205ENST00000566233 ZFYVE9O95405 1425 aa18.19■□□□□ 0.5
RAB11A-205ENST00000566233 NAIPQ13075 1403 aa18.19■□□□□ 0.5
RAB11A-205ENST00000566233 SPHKAPQ2M3C7 1700 aa18.15■□□□□ 0.5
RAB11A-205ENST00000566233 XIRP1Q702N8 1843 aaKnown RBP18.14■□□□□ 0.49
RAB11A-205ENST00000566233 HFM1A2PYH4 1435 aa18.14■□□□□ 0.49
RAB11A-205ENST00000566233 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.49
RAB11A-205ENST00000566233 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms