RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 FBXO31Q5XUX0 539 aaPredicted RBP31.89■■■□□ 2.7
EDC3-209ENST00000566119 SHANK2Q9UPX8 1470 aa31.88■■■□□ 2.69
EDC3-209ENST00000566119 KDM5DQ9BY66 1539 aa31.87■■■□□ 2.69
EDC3-209ENST00000566119 KIF15Q9NS87 1388 aa31.87■■■□□ 2.69
EDC3-209ENST00000566119 CHIC2Q9UKJ5 165 aa31.87■■■□□ 2.69
EDC3-209ENST00000566119 FAM50AQ14320 339 aaKnown RBP31.85■■■□□ 2.69
EDC3-209ENST00000566119 DUOX2Q9NRD8 1548 aa31.85■■■□□ 2.69
EDC3-209ENST00000566119 FAM135AQ9P2D6 1515 aa31.85■■■□□ 2.69
EDC3-209ENST00000566119 DNMT1P26358 1616 aaKnown RBP31.83■■■□□ 2.69
EDC3-209ENST00000566119 STRCQ7RTU9 1775 aa31.82■■■□□ 2.68
EDC3-209ENST00000566119 PZPP20742 1482 aa31.8■■■□□ 2.68
EDC3-209ENST00000566119 PPARGC1BQ86YN6 1023 aaKnown RBP31.79■■■□□ 2.68
EDC3-209ENST00000566119 CROCC2H7BZ55 1655 aa31.79■■■□□ 2.68
EDC3-209ENST00000566119 ANKRD30AQ9BXX3 1397 aa31.79■■■□□ 2.68
EDC3-209ENST00000566119 RNF17Q9BXT8 1623 aaKnown RBP31.78■■■□□ 2.68
EDC3-209ENST00000566119 EIF2AK4Q9P2K8 1649 aaKnown RBP31.78■■■□□ 2.68
EDC3-209ENST00000566119 NCOA1Q15788 1441 aa31.78■■■□□ 2.68
EDC3-209ENST00000566119 TNRQ92752 1358 aa31.77■■■□□ 2.68
EDC3-209ENST00000566119 MYO3AQ8NEV4 1616 aa31.76■■■□□ 2.67
EDC3-209ENST00000566119 ERBINQ96RT1 1412 aa31.75■■■□□ 2.67
EDC3-209ENST00000566119 CAMSAP1Q5T5Y3 1602 aa31.75■■■□□ 2.67
EDC3-209ENST00000566119 FBXO41Q8TF61 875 aa31.75■■■□□ 2.67
EDC3-209ENST00000566119 PTPRTO14522 1441 aa31.75■■■□□ 2.67
EDC3-209ENST00000566119 ABCC3O15438 1527 aa31.74■■■□□ 2.67
EDC3-209ENST00000566119 NCKAP5LQ9HCH0 1330 aa31.74■■■□□ 2.67
EDC3-209ENST00000566119 CEP170BQ9Y4F5 1589 aaPredicted RBP31.73■■■□□ 2.67
EDC3-209ENST00000566119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.72■■■□□ 2.67
EDC3-209ENST00000566119 MROH1Q8NDA8 1641 aa31.71■■■□□ 2.67
EDC3-209ENST00000566119 CERKQ8TCT0 537 aa31.71■■■□□ 2.67
EDC3-209ENST00000566119 A2ML1A8K2U0 1454 aa31.71■■■□□ 2.67
EDC3-209ENST00000566119 ZNF142P52746 1687 aaPredicted RBP31.68■■■□□ 2.66
EDC3-209ENST00000566119 PKD2Q13563 968 aa31.67■■■□□ 2.66
EDC3-209ENST00000566119 ADGRL2O95490 1459 aa31.65■■■□□ 2.66
EDC3-209ENST00000566119 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
EDC3-209ENST00000566119 ZC3H13Q5T200 1668 aaKnown RBP31.64■■■□□ 2.65
EDC3-209ENST00000566119 PRDM15P57071 1507 aaPredicted RBP31.61■■■□□ 2.65
EDC3-209ENST00000566119 NLRP1Q9C000 1473 aa31.6■■■□□ 2.65
EDC3-209ENST00000566119 KANK1Q14678 1352 aa31.6■■■□□ 2.65
EDC3-209ENST00000566119 THEMISQ8N1K5 641 aaPredicted RBP31.6■■■□□ 2.65
EDC3-209ENST00000566119 ERVK-7P63135 1459 aa31.58■■■□□ 2.65
EDC3-209ENST00000566119 SPATA31D1Q6ZQQ2 1576 aa31.57■■■□□ 2.64
EDC3-209ENST00000566119 ARHGAP31Q2M1Z3 1444 aa31.57■■■□□ 2.64
EDC3-209ENST00000566119 CEP152O94986 1710 aa31.56■■■□□ 2.64
EDC3-209ENST00000566119 ANKRD50Q9ULJ7 1429 aa31.55■■■□□ 2.64
EDC3-209ENST00000566119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.55■■■□□ 2.642e-11■□□□□ 9.6
EDC3-209ENST00000566119 DEPDC5O75140 1603 aa31.54■■■□□ 2.64
EDC3-209ENST00000566119 ITGAEP38570 1179 aa31.54■■■□□ 2.64
EDC3-209ENST00000566119 ANKLE2Q86XL3 938 aa31.52■■■□□ 2.64
EDC3-209ENST00000566119 UGGT1Q9NYU2 1555 aa31.51■■■□□ 2.64
EDC3-209ENST00000566119 ROCK1Q13464 1354 aa31.48■■■□□ 2.63
EDC3-209ENST00000566119 ZNF335Q9H4Z2 1342 aaPredicted RBP31.48■■■□□ 2.63
EDC3-209ENST00000566119 VWDEQ8N2E2 1590 aa31.47■■■□□ 2.63
EDC3-209ENST00000566119 LMTK2Q8IWU2 1503 aa31.47■■■□□ 2.63
EDC3-209ENST00000566119 LTBP4Q8N2S1 1624 aa31.46■■■□□ 2.63
EDC3-209ENST00000566119 CFAP65Q6ZU64 1925 aaKnown RBP31.39■■■□□ 2.62
EDC3-209ENST00000566119 NEURL4Q96JN8 1562 aa31.39■■■□□ 2.61
EDC3-209ENST00000566119 IDI1Q13907 227 aa31.37■■■□□ 2.61
EDC3-209ENST00000566119 RRBP1Q9P2E9 1410 aaKnown RBP31.35■■■□□ 2.61
EDC3-209ENST00000566119 NPHP4O75161 1426 aaPredicted RBP31.34■■■□□ 2.61
EDC3-209ENST00000566119 EFCAB6Q5THR3 1501 aa31.34■■■□□ 2.61
EDC3-209ENST00000566119 MED14O60244 1454 aa31.33■■■□□ 2.61
EDC3-209ENST00000566119 STAG3Q9UJ98 1225 aa31.33■■■□□ 2.61
EDC3-209ENST00000566119 NOS1P29475 1434 aa31.32■■■□□ 2.61
EDC3-209ENST00000566119 POLR1AO95602 1720 aaPredicted RBP31.32■■■□□ 2.61
EDC3-209ENST00000566119 LTKP29376 864 aa31.3■■■□□ 2.6
EDC3-209ENST00000566119 TXNDC2Q86VQ3 553 aa31.3■■■□□ 2.6
EDC3-209ENST00000566119 UBR1Q8IWV7 1749 aa31.29■■■□□ 2.6
EDC3-209ENST00000566119 SLC52A1Q9NWF4 448 aa31.28■■■□□ 2.6
EDC3-209ENST00000566119 IQSEC2Q5JU85 1478 aa31.27■■■□□ 2.6
EDC3-209ENST00000566119 RPRD2Q5VT52 1461 aaKnown RBP31.27■■■□□ 2.6
EDC3-209ENST00000566119 UNC13BO14795 1591 aa31.26■■■□□ 2.6
EDC3-209ENST00000566119 NUP155O75694 1391 aa31.26■■■□□ 2.59
EDC3-209ENST00000566119 ARHGAP23Q9P227 1491 aa31.26■■■□□ 2.59
EDC3-209ENST00000566119 SYNMO15061 1565 aa31.26■■■□□ 2.59
EDC3-209ENST00000566119 PIK3C2BO00750 1634 aa31.25■■■□□ 2.59
EDC3-209ENST00000566119 EID1Q9Y6B2 187 aa31.25■■■□□ 2.59
EDC3-209ENST00000566119 SLIT1O75093 1534 aa31.24■■■□□ 2.59
EDC3-209ENST00000566119 TMEM2Q9UHN6 1383 aa31.24■■■□□ 2.59
EDC3-209ENST00000566119 SCAF11Q99590 1463 aaKnown RBP31.23■■■□□ 2.59
EDC3-209ENST00000566119 TET3O43151 1660 aa31.21■■■□□ 2.59
EDC3-209ENST00000566119 IQGAP1P46940 1657 aa31.18■■■□□ 2.58
EDC3-209ENST00000566119 UBAP1LF5GYI3 381 aa31.16■■■□□ 2.58
EDC3-209ENST00000566119 CPS1P31327 1500 aa31.15■■■□□ 2.58
EDC3-209ENST00000566119 IQGAP3Q86VI3 1631 aa31.14■■■□□ 2.58
EDC3-209ENST00000566119 NAIPQ13075 1403 aa31.13■■■□□ 2.57
EDC3-209ENST00000566119 KDM5AP29375 1690 aaKnown RBP31.12■■■□□ 2.57
EDC3-209ENST00000566119 GCC2Q8IWJ2 1684 aa31.12■■■□□ 2.57
EDC3-209ENST00000566119 ADGRB3O60242 1522 aa31.1■■■□□ 2.57
EDC3-209ENST00000566119 E9PCH4 1651 aa31.09■■■□□ 2.57
EDC3-209ENST00000566119 CHGAP10645 457 aaKnown RBP31.08■■■□□ 2.57
EDC3-209ENST00000566119 SLC26A8Q96RN1 970 aa31.04■■■□□ 2.56
EDC3-209ENST00000566119 HFM1A2PYH4 1435 aa31.03■■■□□ 2.56
EDC3-209ENST00000566119 HDGFP51858 240 aaKnown RBP31.02■■■□□ 2.56
EDC3-209ENST00000566119 TOM1O60784 492 aa31.01■■■□□ 2.55
EDC3-209ENST00000566119 BCANQ96GW7 911 aa31■■■□□ 2.55
EDC3-209ENST00000566119 ZFYVE9O95405 1425 aa30.99■■■□□ 2.55
EDC3-209ENST00000566119 LRRC7Q96NW7 1537 aa30.99■■■□□ 2.55
EDC3-209ENST00000566119 TMEM131LA2VDJ0 1609 aa30.99■■■□□ 2.55
EDC3-209ENST00000566119 TRIM52Q96A61 297 aa30.99■■■□□ 2.55
EDC3-209ENST00000566119 SENP3Q9H4L4 574 aaPredicted RBP30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms