RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 MAP3K1Q13233 1512 aa29.81■■■□□ 2.36
SPSB3-207ENST00000565550 LTBP4Q8N2S1 1624 aa29.8■■■□□ 2.36
SPSB3-207ENST00000565550 PLA2R1Q13018 1463 aa29.78■■■□□ 2.36
SPSB3-207ENST00000565550 ZNF142P52746 1687 aaPredicted RBP29.78■■■□□ 2.36
SPSB3-207ENST00000565550 KDM5DQ9BY66 1539 aa29.75■■■□□ 2.35
SPSB3-207ENST00000565550 A2ML1A8K2U0 1454 aa29.74■■■□□ 2.35
SPSB3-207ENST00000565550 MYOM3Q5VTT5 1437 aa29.74■■■□□ 2.35
SPSB3-207ENST00000565550 TNRQ92752 1358 aa29.74■■■□□ 2.35
SPSB3-207ENST00000565550 TCOF1Q13428 1488 aaKnown RBP29.74■■■□□ 2.35
SPSB3-207ENST00000565550 MIA2Q96PC5 1412 aa29.73■■■□□ 2.35
SPSB3-207ENST00000565550 ZNF335Q9H4Z2 1342 aaPredicted RBP29.72■■■□□ 2.35
SPSB3-207ENST00000565550 PZPP20742 1482 aa29.72■■■□□ 2.35
SPSB3-207ENST00000565550 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
SPSB3-207ENST00000565550 MAST1Q9Y2H9 1570 aa29.69■■■□□ 2.34
SPSB3-207ENST00000565550 DNMT1P26358 1616 aaKnown RBP29.68■■■□□ 2.34
SPSB3-207ENST00000565550 APLP2Q06481 763 aa29.68■■■□□ 2.34
SPSB3-207ENST00000565550 IQSEC2Q5JU85 1478 aa29.66■■■□□ 2.34
SPSB3-207ENST00000565550 THEMISQ8N1K5 641 aaPredicted RBP29.6■■■□□ 2.33
SPSB3-207ENST00000565550 RNF17Q9BXT8 1623 aaKnown RBP29.58■■■□□ 2.33
SPSB3-207ENST00000565550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.58■■■□□ 2.331e-6■■■■□ 25.8
SPSB3-207ENST00000565550 ABCC3O15438 1527 aa29.57■■■□□ 2.32
SPSB3-207ENST00000565550 NLRP1Q9C000 1473 aa29.57■■■□□ 2.32
SPSB3-207ENST00000565550 ANKLE2Q86XL3 938 aa29.57■■■□□ 2.32
SPSB3-207ENST00000565550 ABCC5O15440 1437 aa29.55■■■□□ 2.32
SPSB3-207ENST00000565550 RRP7BPQ9NSQ0 103 aa29.55■■■□□ 2.32
SPSB3-207ENST00000565550 EIF2AK4Q9P2K8 1649 aaKnown RBP29.54■■■□□ 2.32
SPSB3-207ENST00000565550 DUOX2Q9NRD8 1548 aa29.54■■■□□ 2.32
SPSB3-207ENST00000565550 UBAP1LF5GYI3 381 aa29.53■■■□□ 2.32
SPSB3-207ENST00000565550 UGGT1Q9NYU2 1555 aa29.52■■■□□ 2.32
SPSB3-207ENST00000565550 KIF15Q9NS87 1388 aa29.52■■■□□ 2.32
SPSB3-207ENST00000565550 MROH1Q8NDA8 1641 aa29.5■■■□□ 2.31
SPSB3-207ENST00000565550 PTPN23Q9H3S7 1636 aa29.5■■■□□ 2.31
SPSB3-207ENST00000565550 NEURL4Q96JN8 1562 aa29.5■■■□□ 2.31
SPSB3-207ENST00000565550 ZC3H13Q5T200 1668 aaKnown RBP29.49■■■□□ 2.31
SPSB3-207ENST00000565550 SHANK2Q9UPX8 1470 aa29.48■■■□□ 2.31
SPSB3-207ENST00000565550 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
SPSB3-207ENST00000565550 DAPK1P53355 1430 aa29.47■■■□□ 2.31
SPSB3-207ENST00000565550 FGD6Q6ZV73 1430 aa29.47■■■□□ 2.31
SPSB3-207ENST00000565550 POLR1AO95602 1720 aaPredicted RBP29.47■■■□□ 2.31
SPSB3-207ENST00000565550 DISP3Q9P2K9 1392 aa29.47■■■□□ 2.31
SPSB3-207ENST00000565550 ERVK-7P63135 1459 aa29.47■■■□□ 2.31
SPSB3-207ENST00000565550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.44■■■□□ 2.35e-8■■■■□ 25.6
SPSB3-207ENST00000565550 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
SPSB3-207ENST00000565550 NPHP4O75161 1426 aaPredicted RBP29.44■■■□□ 2.3
SPSB3-207ENST00000565550 ERBINQ96RT1 1412 aa29.44■■■□□ 2.3
SPSB3-207ENST00000565550 MED14O60244 1454 aa29.42■■■□□ 2.3
SPSB3-207ENST00000565550 CEP152O94986 1710 aa29.41■■■□□ 2.3
SPSB3-207ENST00000565550 CROCC2H7BZ55 1655 aa29.4■■■□□ 2.3
SPSB3-207ENST00000565550 CPS1P31327 1500 aa29.38■■■□□ 2.29
SPSB3-207ENST00000565550 DEPDC5O75140 1603 aa29.38■■■□□ 2.29
SPSB3-207ENST00000565550 ANKRD30AQ9BXX3 1397 aa29.38■■■□□ 2.29
SPSB3-207ENST00000565550 ARHGAP31Q2M1Z3 1444 aa29.37■■■□□ 2.29
SPSB3-207ENST00000565550 PRDM15P57071 1507 aaPredicted RBP29.37■■■□□ 2.29
SPSB3-207ENST00000565550 CFAP65Q6ZU64 1925 aaKnown RBP29.36■■■□□ 2.29
SPSB3-207ENST00000565550 VWDEQ8N2E2 1590 aa29.35■■■□□ 2.29
SPSB3-207ENST00000565550 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
SPSB3-207ENST00000565550 KANK1Q14678 1352 aa29.34■■■□□ 2.29
SPSB3-207ENST00000565550 TOM1O60784 492 aa29.32■■■□□ 2.28
SPSB3-207ENST00000565550 FAM50AQ14320 339 aaKnown RBP29.32■■■□□ 2.28
SPSB3-207ENST00000565550 PIP4K2BP78356 416 aa29.31■■■□□ 2.28
SPSB3-207ENST00000565550 SCAF1Q9H7N4 1312 aaKnown RBP29.3■■■□□ 2.28
SPSB3-207ENST00000565550 IQGAP1P46940 1657 aa29.28■■■□□ 2.28
SPSB3-207ENST00000565550 LTKP29376 864 aa29.28■■■□□ 2.28
SPSB3-207ENST00000565550 TXNDC2Q86VQ3 553 aa29.28■■■□□ 2.28
SPSB3-207ENST00000565550 UBR1Q8IWV7 1749 aa29.28■■■□□ 2.28
SPSB3-207ENST00000565550 SCAF11Q99590 1463 aaKnown RBP29.24■■■□□ 2.27
SPSB3-207ENST00000565550 ARHGAP23Q9P227 1491 aa29.23■■■□□ 2.27
SPSB3-207ENST00000565550 STAG3Q9UJ98 1225 aa29.23■■■□□ 2.27
SPSB3-207ENST00000565550 LMTK2Q8IWU2 1503 aa29.22■■■□□ 2.27
SPSB3-207ENST00000565550 HSPA1LP34931 641 aa29.22■■■□□ 2.27
SPSB3-207ENST00000565550 EID1Q9Y6B2 187 aa29.22■■■□□ 2.27
SPSB3-207ENST00000565550 ADGRL2O95490 1459 aa29.22■■■□□ 2.27
SPSB3-207ENST00000565550 SLIT1O75093 1534 aa29.21■■■□□ 2.27
SPSB3-207ENST00000565550 IDI1Q13907 227 aa29.21■■■□□ 2.27
SPSB3-207ENST00000565550 TMEM2Q9UHN6 1383 aa29.17■■■□□ 2.26
SPSB3-207ENST00000565550 LRRC7Q96NW7 1537 aa29.17■■■□□ 2.26
SPSB3-207ENST00000565550 PIK3C2BO00750 1634 aa29.16■■■□□ 2.26
SPSB3-207ENST00000565550 ANKRD50Q9ULJ7 1429 aa29.16■■■□□ 2.26
SPSB3-207ENST00000565550 STRCP1A6NGW2 1772 aa29.16■■■□□ 2.26
SPSB3-207ENST00000565550 NOS1P29475 1434 aa29.13■■■□□ 2.25
SPSB3-207ENST00000565550 SOCS7O14512 581 aa29.12■■■□□ 2.25
SPSB3-207ENST00000565550 PPARGC1BQ86YN6 1023 aaKnown RBP29.12■■■□□ 2.25
SPSB3-207ENST00000565550 ALKQ9UM73 1620 aa29.11■■■□□ 2.25
SPSB3-207ENST00000565550 EFCAB6Q5THR3 1501 aa29.1■■■□□ 2.25
SPSB3-207ENST00000565550 SYNMO15061 1565 aa29.09■■■□□ 2.25
SPSB3-207ENST00000565550 SLC52A1Q9NWF4 448 aa29.09■■■□□ 2.25
SPSB3-207ENST00000565550 KDM5AP29375 1690 aaKnown RBP29.03■■■□□ 2.24
SPSB3-207ENST00000565550 SLC26A8Q96RN1 970 aa29.03■■■□□ 2.24
SPSB3-207ENST00000565550 SENP3Q9H4L4 574 aaPredicted RBP29.03■■■□□ 2.24
SPSB3-207ENST00000565550 RPRD2Q5VT52 1461 aaKnown RBP29.02■■■□□ 2.24
SPSB3-207ENST00000565550 ADGRB3O60242 1522 aa28.99■■■□□ 2.23
SPSB3-207ENST00000565550 KCNA6P17658 529 aa28.99■■■□□ 2.23
SPSB3-207ENST00000565550 ROCK1Q13464 1354 aa28.99■■■□□ 2.23
SPSB3-207ENST00000565550 ITGAEP38570 1179 aa28.98■■■□□ 2.23
SPSB3-207ENST00000565550 BCANQ96GW7 911 aa28.97■■■□□ 2.23
SPSB3-207ENST00000565550 TET3O43151 1660 aa28.96■■■□□ 2.23
SPSB3-207ENST00000565550 MED1Q15648 1581 aaPredicted RBP28.93■■■□□ 2.22
SPSB3-207ENST00000565550 TMEM94Q12767 1356 aa28.93■■■□□ 2.22
SPSB3-207ENST00000565550 PROSER2Q86WR7 435 aaPredicted RBP28.92■■■□□ 2.22
SPSB3-207ENST00000565550 UNC13BO14795 1591 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms