RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
SNX29-204ENST00000564791 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
SNX29-204ENST00000564791 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
SNX29-204ENST00000564791 A2MP01023 1474 aa16.42■□□□□ 0.22
SNX29-204ENST00000564791 FOXD1Q16676 465 aa16.41■□□□□ 0.22
SNX29-204ENST00000564791 NEUROD1Q13562 356 aa16.39■□□□□ 0.21
SNX29-204ENST00000564791 MROH1Q8NDA8 1641 aa16.39■□□□□ 0.21
SNX29-204ENST00000564791 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
SNX29-204ENST00000564791 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
SNX29-204ENST00000564791 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
SNX29-204ENST00000564791 BCORL1Q5H9F3 1711 aa16.38■□□□□ 0.21
SNX29-204ENST00000564791 PKD2Q13563 968 aa16.38■□□□□ 0.21
SNX29-204ENST00000564791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNX29-204ENST00000564791 RNF17Q9BXT8 1623 aaKnown RBP16.38■□□□□ 0.21
SNX29-204ENST00000564791 PRDM15P57071 1507 aaPredicted RBP16.37■□□□□ 0.21
SNX29-204ENST00000564791 VWDEQ8N2E2 1590 aa16.36■□□□□ 0.21
SNX29-204ENST00000564791 KIF3BO15066 747 aa16.35■□□□□ 0.21
SNX29-204ENST00000564791 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
SNX29-204ENST00000564791 TET3O43151 1660 aa16.33■□□□□ 0.2
SNX29-204ENST00000564791 ARHGEF40Q8TER5 1519 aa16.32■□□□□ 0.2
SNX29-204ENST00000564791 CEP152O94986 1710 aa16.31■□□□□ 0.2
SNX29-204ENST00000564791 KANK1Q14678 1352 aa16.31■□□□□ 0.2
SNX29-204ENST00000564791 RPRD2Q5VT52 1461 aaKnown RBP16.31■□□□□ 0.2
SNX29-204ENST00000564791 E9PCH4 1651 aa16.31■□□□□ 0.2
SNX29-204ENST00000564791 ATP10AO60312 1499 aa16.3■□□□□ 0.2
SNX29-204ENST00000564791 TONSLQ96HA7 1378 aa16.3■□□□□ 0.2
SNX29-204ENST00000564791 REREQ9P2R6 1566 aa16.3■□□□□ 0.2
SNX29-204ENST00000564791 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
SNX29-204ENST00000564791 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.2
SNX29-204ENST00000564791 LMTK2Q8IWU2 1503 aa16.27■□□□□ 0.19
SNX29-204ENST00000564791 EFCAB6Q5THR3 1501 aa16.26■□□□□ 0.19
SNX29-204ENST00000564791 PLA2R1Q13018 1463 aa16.26■□□□□ 0.19
SNX29-204ENST00000564791 SPHKAPQ2M3C7 1700 aa16.25■□□□□ 0.19
SNX29-204ENST00000564791 ABCC3O15438 1527 aa16.24■□□□□ 0.19
SNX29-204ENST00000564791 AGLP35573 1532 aa16.24■□□□□ 0.19
SNX29-204ENST00000564791 GGT6Q6P531 493 aa16.24■□□□□ 0.19
SNX29-204ENST00000564791 ZC3H13Q5T200 1668 aaKnown RBP16.23■□□□□ 0.19
SNX29-204ENST00000564791 CAMSAP1Q5T5Y3 1602 aa16.22■□□□□ 0.19
SNX29-204ENST00000564791 PPP1R15AO75807 674 aaPredicted RBP16.22■□□□□ 0.19
SNX29-204ENST00000564791 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
SNX29-204ENST00000564791 TRPM2O94759 1503 aa16.21■□□□□ 0.19
SNX29-204ENST00000564791 PTPRTO14522 1441 aa16.2■□□□□ 0.18
SNX29-204ENST00000564791 L3MBTL2Q969R5 705 aa16.19■□□□□ 0.18
SNX29-204ENST00000564791 WASHC2CQ9Y4E1 1318 aa16.18■□□□□ 0.18
SNX29-204ENST00000564791 CFAP65Q6ZU64 1925 aaKnown RBP16.17■□□□□ 0.18
SNX29-204ENST00000564791 CLTCL1P53675 1640 aa16.17■□□□□ 0.18
SNX29-204ENST00000564791 NPATQ14207 1427 aa16.17■□□□□ 0.18
SNX29-204ENST00000564791 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.17
SNX29-204ENST00000564791 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
SNX29-204ENST00000564791 ARHGAP31Q2M1Z3 1444 aa16.12■□□□□ 0.17
SNX29-204ENST00000564791 KIF1BO60333 1816 aa16.1■□□□□ 0.17
SNX29-204ENST00000564791 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
SNX29-204ENST00000564791 MLECQ14165 292 aa16.1■□□□□ 0.17
SNX29-204ENST00000564791 SPATA31E1Q6ZUB1 1445 aa16.1■□□□□ 0.17
SNX29-204ENST00000564791 PREX1Q8TCU6 1659 aa16.1■□□□□ 0.17
SNX29-204ENST00000564791 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
SNX29-204ENST00000564791 CNTLNQ9NXG0 1405 aa16.09■□□□□ 0.17
SNX29-204ENST00000564791 SYNMO15061 1565 aa16.09■□□□□ 0.17
SNX29-204ENST00000564791 NOS1P29475 1434 aa16.08■□□□□ 0.17
SNX29-204ENST00000564791 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
SNX29-204ENST00000564791 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
SNX29-204ENST00000564791 MROH2AA6NES4 1674 aa16.07■□□□□ 0.16
SNX29-204ENST00000564791 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
SNX29-204ENST00000564791 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
SNX29-204ENST00000564791 PIK3C2BO00750 1634 aa16.06■□□□□ 0.16
SNX29-204ENST00000564791 RGL3Q3MIN7 710 aa16.06■□□□□ 0.16
SNX29-204ENST00000564791 DCAF11Q8TEB1 546 aa16.05■□□□□ 0.16
SNX29-204ENST00000564791 ADGRB3O60242 1522 aa16.04■□□□□ 0.16
SNX29-204ENST00000564791 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
SNX29-204ENST00000564791 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
SNX29-204ENST00000564791 KDM2AQ9Y2K7 1162 aa16.03■□□□□ 0.16
SNX29-204ENST00000564791 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
SNX29-204ENST00000564791 PRAG1Q86YV5 1406 aa16.01■□□□□ 0.15
SNX29-204ENST00000564791 RALGAPBQ86X10 1494 aa16.01■□□□□ 0.15
SNX29-204ENST00000564791 FER1L4A9Z1Z3 1794 aa16.01■□□□□ 0.15
SNX29-204ENST00000564791 SPATA31D1Q6ZQQ2 1576 aa16.01■□□□□ 0.15
SNX29-204ENST00000564791 TRPM1Q7Z4N2 1603 aa16■□□□□ 0.15
SNX29-204ENST00000564791 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
SNX29-204ENST00000564791 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
SNX29-204ENST00000564791 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
SNX29-204ENST00000564791 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
SNX29-204ENST00000564791 PPLO60437 1756 aa15.97■□□□□ 0.15
SNX29-204ENST00000564791 ZMYM3Q14202 1370 aa15.97■□□□□ 0.15
SNX29-204ENST00000564791 CHGAP10645 457 aaKnown RBP15.96■□□□□ 0.15
SNX29-204ENST00000564791 MYOM2P54296 1465 aa15.95■□□□□ 0.14
SNX29-204ENST00000564791 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
SNX29-204ENST00000564791 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
SNX29-204ENST00000564791 IDI1Q13907 227 aa15.94■□□□□ 0.14
SNX29-204ENST00000564791 C3P01024 1663 aa15.94■□□□□ 0.14
SNX29-204ENST00000564791 HIRIP3Q9BW71 556 aaPredicted RBP15.94■□□□□ 0.14
SNX29-204ENST00000564791 HSPA5P11021 654 aaKnown RBP15.93■□□□□ 0.14
SNX29-204ENST00000564791 LAMC1P11047 1609 aa15.92■□□□□ 0.14
SNX29-204ENST00000564791 EIF4G2P78344 907 aaKnown RBP eCLIP15.92■□□□□ 0.144e-7■■■■■ 52.2
SNX29-204ENST00000564791 STAC3Q96MF2 364 aa15.92■□□□□ 0.14
SNX29-204ENST00000564791 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
SNX29-204ENST00000564791 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
SNX29-204ENST00000564791 KIAA1210Q9ULL0 1709 aa15.91■□□□□ 0.14
SNX29-204ENST00000564791 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
SNX29-204ENST00000564791 RIMS1Q86UR5 1692 aaKnown RBP15.9■□□□□ 0.14
SNX29-204ENST00000564791 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms