RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PLA2R1Q13018 1463 aa29.13■■■□□ 2.25
CLN6-204ENST00000564752 CEP170BQ9Y4F5 1589 aaPredicted RBP29.13■■■□□ 2.25
CLN6-204ENST00000564752 MIA2Q96PC5 1412 aa29.12■■■□□ 2.25
CLN6-204ENST00000564752 LTBP4Q8N2S1 1624 aa29.12■■■□□ 2.25
CLN6-204ENST00000564752 ZNF142P52746 1687 aaPredicted RBP29.11■■■□□ 2.25
CLN6-204ENST00000564752 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
CLN6-204ENST00000564752 DISP3Q9P2K9 1392 aa29.1■■■□□ 2.25
CLN6-204ENST00000564752 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
CLN6-204ENST00000564752 A2ML1A8K2U0 1454 aa29.09■■■□□ 2.25
CLN6-204ENST00000564752 TCOF1Q13428 1488 aaKnown RBP29.09■■■□□ 2.25
CLN6-204ENST00000564752 KDM5DQ9BY66 1539 aa29.09■■■□□ 2.25
CLN6-204ENST00000564752 TNRQ92752 1358 aa29.08■■■□□ 2.25
CLN6-204ENST00000564752 PZPP20742 1482 aa29.07■■■□□ 2.24
CLN6-204ENST00000564752 MAST1Q9Y2H9 1570 aa29.05■■■□□ 2.24
CLN6-204ENST00000564752 APLP2Q06481 763 aa29.04■■■□□ 2.24
CLN6-204ENST00000564752 ZNF335Q9H4Z2 1342 aaPredicted RBP29.03■■■□□ 2.24
CLN6-204ENST00000564752 IQSEC2Q5JU85 1478 aa29.02■■■□□ 2.24
CLN6-204ENST00000564752 DNMT1P26358 1616 aaKnown RBP29.01■■■□□ 2.23
CLN6-204ENST00000564752 SPATA31D1Q6ZQQ2 1576 aa28.98■■■□□ 2.23
CLN6-204ENST00000564752 ILDR2Q71H61 639 aa28.96■■■□□ 2.23
CLN6-204ENST00000564752 RNF17Q9BXT8 1623 aaKnown RBP28.94■■■□□ 2.22
CLN6-204ENST00000564752 THEMISQ8N1K5 641 aaPredicted RBP28.94■■■□□ 2.22
CLN6-204ENST00000564752 NLRP1Q9C000 1473 aa28.93■■■□□ 2.22
CLN6-204ENST00000564752 ABCC3O15438 1527 aa28.92■■■□□ 2.22
CLN6-204ENST00000564752 ABCC5O15440 1437 aa28.92■■■□□ 2.22
CLN6-204ENST00000564752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.91■■■□□ 2.22
CLN6-204ENST00000564752 ANKLE2Q86XL3 938 aa28.91■■■□□ 2.22
CLN6-204ENST00000564752 DUOX2Q9NRD8 1548 aa28.9■■■□□ 2.22
CLN6-204ENST00000564752 EIF2AK4Q9P2K8 1649 aaKnown RBP28.9■■■□□ 2.22
CLN6-204ENST00000564752 RRP7BPQ9NSQ0 103 aa28.88■■■□□ 2.21
CLN6-204ENST00000564752 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
CLN6-204ENST00000564752 SHANK2Q9UPX8 1470 aa28.87■■■□□ 2.21
CLN6-204ENST00000564752 UGGT1Q9NYU2 1555 aa28.86■■■□□ 2.21
CLN6-204ENST00000564752 MROH1Q8NDA8 1641 aa28.85■■■□□ 2.21
CLN6-204ENST00000564752 PTPN23Q9H3S7 1636 aa28.85■■■□□ 2.21
CLN6-204ENST00000564752 FGD6Q6ZV73 1430 aa28.85■■■□□ 2.21
CLN6-204ENST00000564752 NEURL4Q96JN8 1562 aa28.84■■■□□ 2.21
CLN6-204ENST00000564752 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
CLN6-204ENST00000564752 UBAP1LF5GYI3 381 aa28.83■■■□□ 2.21
CLN6-204ENST00000564752 SOCS7O14512 581 aa28.83■■■□□ 2.21
CLN6-204ENST00000564752 DAPK1P53355 1430 aa28.83■■■□□ 2.21
CLN6-204ENST00000564752 ERBINQ96RT1 1412 aa28.82■■■□□ 2.2
CLN6-204ENST00000564752 ERVK-7P63135 1459 aa28.82■■■□□ 2.2
CLN6-204ENST00000564752 POLR1AO95602 1720 aaPredicted RBP28.81■■■□□ 2.2
CLN6-204ENST00000564752 MED14O60244 1454 aa28.78■■■□□ 2.2
CLN6-204ENST00000564752 CHIC2Q9UKJ5 165 aa28.78■■■□□ 2.2
CLN6-204ENST00000564752 NPHP4O75161 1426 aaPredicted RBP28.77■■■□□ 2.2
CLN6-204ENST00000564752 ARHGAP31Q2M1Z3 1444 aa28.77■■■□□ 2.2
CLN6-204ENST00000564752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.76■■■□□ 2.19
CLN6-204ENST00000564752 CROCC2H7BZ55 1655 aa28.75■■■□□ 2.19
CLN6-204ENST00000564752 ANKRD30AQ9BXX3 1397 aa28.75■■■□□ 2.19
CLN6-204ENST00000564752 PRDM15P57071 1507 aaPredicted RBP28.74■■■□□ 2.19
CLN6-204ENST00000564752 DEPDC5O75140 1603 aa28.73■■■□□ 2.19
CLN6-204ENST00000564752 CPS1P31327 1500 aa28.73■■■□□ 2.19
CLN6-204ENST00000564752 CEP152O94986 1710 aa28.72■■■□□ 2.19
CLN6-204ENST00000564752 KANK1Q14678 1352 aa28.7■■■□□ 2.18
CLN6-204ENST00000564752 VWDEQ8N2E2 1590 aa28.68■■■□□ 2.18
CLN6-204ENST00000564752 TOM1O60784 492 aa28.65■■■□□ 2.18
CLN6-204ENST00000564752 FAM50AQ14320 339 aaKnown RBP28.65■■■□□ 2.18
CLN6-204ENST00000564752 CFAP65Q6ZU64 1925 aaKnown RBP28.65■■■□□ 2.18
CLN6-204ENST00000564752 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.17
CLN6-204ENST00000564752 LTKP29376 864 aa28.63■■■□□ 2.17
CLN6-204ENST00000564752 TXNDC2Q86VQ3 553 aa28.62■■■□□ 2.17
CLN6-204ENST00000564752 IQGAP1P46940 1657 aa28.61■■■□□ 2.17
CLN6-204ENST00000564752 ADGRL2O95490 1459 aa28.61■■■□□ 2.17
CLN6-204ENST00000564752 UBR1Q8IWV7 1749 aa28.61■■■□□ 2.17
CLN6-204ENST00000564752 LMTK2Q8IWU2 1503 aa28.61■■■□□ 2.17
CLN6-204ENST00000564752 ARHGAP23Q9P227 1491 aa28.6■■■□□ 2.17
CLN6-204ENST00000564752 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
CLN6-204ENST00000564752 PIP4K2BP78356 416 aa28.59■■■□□ 2.17
CLN6-204ENST00000564752 SLIT1O75093 1534 aa28.59■■■□□ 2.17
CLN6-204ENST00000564752 IDI1Q13907 227 aa28.57■■■□□ 2.16
CLN6-204ENST00000564752 EID1Q9Y6B2 187 aa28.57■■■□□ 2.16
CLN6-204ENST00000564752 STAG3Q9UJ98 1225 aa28.55■■■□□ 2.16
CLN6-204ENST00000564752 HSPA1LP34931 641 aa28.54■■■□□ 2.16
CLN6-204ENST00000564752 TMEM2Q9UHN6 1383 aa28.53■■■□□ 2.16
CLN6-204ENST00000564752 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
CLN6-204ENST00000564752 LRRC7Q96NW7 1537 aa28.51■■■□□ 2.15
CLN6-204ENST00000564752 NOS1P29475 1434 aa28.51■■■□□ 2.15
CLN6-204ENST00000564752 PIK3C2BO00750 1634 aa28.5■■■□□ 2.15
CLN6-204ENST00000564752 SLC52A1Q9NWF4 448 aa28.48■■■□□ 2.15
CLN6-204ENST00000564752 MED1Q15648 1581 aaPredicted RBP28.48■■■□□ 2.15
CLN6-204ENST00000564752 STRCP1A6NGW2 1772 aa28.47■■■□□ 2.15
CLN6-204ENST00000564752 EFCAB6Q5THR3 1501 aa28.47■■■□□ 2.15
CLN6-204ENST00000564752 ALKQ9UM73 1620 aa28.45■■■□□ 2.14
CLN6-204ENST00000564752 SYNMO15061 1565 aa28.45■■■□□ 2.14
CLN6-204ENST00000564752 KDM5AP29375 1690 aaKnown RBP28.42■■■□□ 2.14
CLN6-204ENST00000564752 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
CLN6-204ENST00000564752 ROCK1Q13464 1354 aa28.39■■■□□ 2.14
CLN6-204ENST00000564752 SLC26A8Q96RN1 970 aa28.36■■■□□ 2.13
CLN6-204ENST00000564752 ADGRB3O60242 1522 aa28.35■■■□□ 2.13
CLN6-204ENST00000564752 KCNA6P17658 529 aa28.35■■■□□ 2.13
CLN6-204ENST00000564752 TET3O43151 1660 aa28.33■■■□□ 2.13
CLN6-204ENST00000564752 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
CLN6-204ENST00000564752 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
CLN6-204ENST00000564752 ITGAEP38570 1179 aa28.3■■■□□ 2.12
CLN6-204ENST00000564752 UNC13BO14795 1591 aa28.28■■■□□ 2.12
CLN6-204ENST00000564752 HDGFP51858 240 aaKnown RBP28.28■■■□□ 2.12
CLN6-204ENST00000564752 BCANQ96GW7 911 aa28.28■■■□□ 2.12
CLN6-204ENST00000564752 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms