RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 CCDC141Q6ZP82 1450 aa39.98■■■■□ 3.99
CYLD-208ENST00000564634 CAMSAP2Q08AD1 1489 aa39.97■■■■□ 3.99
CYLD-208ENST00000564634 NCOA2Q15596 1464 aa39.95■■■■□ 3.99
CYLD-208ENST00000564634 KIF3BO15066 747 aa39.94■■■■□ 3.98
CYLD-208ENST00000564634 KDM5DQ9BY66 1539 aa39.93■■■■□ 3.98
CYLD-208ENST00000564634 TNRQ92752 1358 aa39.91■■■■□ 3.98
CYLD-208ENST00000564634 FBXO31Q5XUX0 539 aaPredicted RBP39.9■■■■□ 3.98
CYLD-208ENST00000564634 POLR1AO95602 1720 aaPredicted RBP39.9■■■■□ 3.98
CYLD-208ENST00000564634 VPS8Q8N3P4 1428 aa39.9■■■■□ 3.98
CYLD-208ENST00000564634 PZPP20742 1482 aa39.88■■■■□ 3.98
CYLD-208ENST00000564634 NEURL4Q96JN8 1562 aa39.86■■■■□ 3.97
CYLD-208ENST00000564634 FAM135AQ9P2D6 1515 aa39.84■■■■□ 3.97
CYLD-208ENST00000564634 WASHC2CQ9Y4E1 1318 aa39.8■■■■□ 3.96
CYLD-208ENST00000564634 ARHGEF5Q12774 1597 aa39.78■■■■□ 3.96
CYLD-208ENST00000564634 RSPH4AQ5TD94 716 aa39.74■■■■□ 3.95
CYLD-208ENST00000564634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.73■■■■□ 3.95
CYLD-208ENST00000564634 SCAF1Q9H7N4 1312 aaKnown RBP39.73■■■■□ 3.95
CYLD-208ENST00000564634 CPS1P31327 1500 aa39.72■■■■□ 3.95
CYLD-208ENST00000564634 SHANK2Q9UPX8 1470 aa39.7■■■■□ 3.95
CYLD-208ENST00000564634 MIA2Q96PC5 1412 aa39.7■■■■□ 3.95
CYLD-208ENST00000564634 UGGT1Q9NYU2 1555 aa39.69■■■■□ 3.94
CYLD-208ENST00000564634 NLRP1Q9C000 1473 aa39.68■■■■□ 3.94
CYLD-208ENST00000564634 TSPY4P0CV99 314 aa39.68■■■■□ 3.94
CYLD-208ENST00000564634 TSPY10P0CW01 314 aa39.68■■■■□ 3.94
CYLD-208ENST00000564634 PIP4K2BP78356 416 aa39.67■■■■□ 3.94
CYLD-208ENST00000564634 ANKLE2Q86XL3 938 aa39.66■■■■□ 3.94
CYLD-208ENST00000564634 RNF17Q9BXT8 1623 aaKnown RBP39.65■■■■□ 3.94
CYLD-208ENST00000564634 VWDEQ8N2E2 1590 aa39.64■■■■□ 3.94
CYLD-208ENST00000564634 LRRC9Q6ZRR7 1453 aa39.63■■■■□ 3.94
CYLD-208ENST00000564634 THEMISQ8N1K5 641 aaPredicted RBP39.62■■■■□ 3.93
CYLD-208ENST00000564634 ABCC3O15438 1527 aa39.61■■■■□ 3.93
CYLD-208ENST00000564634 NPHP4O75161 1426 aaPredicted RBP39.61■■■■□ 3.93
CYLD-208ENST00000564634 HSPA1LP34931 641 aa39.61■■■■□ 3.93
CYLD-208ENST00000564634 MAST1Q9Y2H9 1570 aa39.6■■■■□ 3.93
CYLD-208ENST00000564634 DEPDC5O75140 1603 aa39.6■■■■□ 3.93
CYLD-208ENST00000564634 MAP3K1Q13233 1512 aa39.6■■■■□ 3.93
CYLD-208ENST00000564634 ZC3H13Q5T200 1668 aaKnown RBP39.59■■■■□ 3.93
CYLD-208ENST00000564634 TOM1O60784 492 aa39.57■■■■□ 3.93
CYLD-208ENST00000564634 IQGAP1P46940 1657 aa39.56■■■■□ 3.92
CYLD-208ENST00000564634 MED14O60244 1454 aa39.56■■■■□ 3.92
CYLD-208ENST00000564634 EIF2AK4Q9P2K8 1649 aaKnown RBP39.54■■■■□ 3.92
CYLD-208ENST00000564634 MED1Q15648 1581 aaPredicted RBP39.53■■■■□ 3.92
CYLD-208ENST00000564634 MROH1Q8NDA8 1641 aa39.52■■■■□ 3.92
CYLD-208ENST00000564634 ERVK-7P63135 1459 aa39.51■■■■□ 3.92
CYLD-208ENST00000564634 APLP2Q06481 763 aa39.5■■■■□ 3.91
CYLD-208ENST00000564634 CEP152O94986 1710 aa39.5■■■■□ 3.91
CYLD-208ENST00000564634 KANK4Q5T7N3 995 aaPredicted RBP39.46■■■■□ 3.91
CYLD-208ENST00000564634 ALKQ9UM73 1620 aa39.46■■■■□ 3.91
CYLD-208ENST00000564634 STRCP1A6NGW2 1772 aa39.44■■■■□ 3.9
CYLD-208ENST00000564634 MYOM3Q5VTT5 1437 aa39.44■■■■□ 3.9
CYLD-208ENST00000564634 CFAP65Q6ZU64 1925 aaKnown RBP39.39■■■■□ 3.9
CYLD-208ENST00000564634 UBR1Q8IWV7 1749 aa39.39■■■■□ 3.9
CYLD-208ENST00000564634 DUOX2Q9NRD8 1548 aa39.38■■■■□ 3.89
CYLD-208ENST00000564634 LRRC7Q96NW7 1537 aa39.36■■■■□ 3.89
CYLD-208ENST00000564634 SYNMO15061 1565 aa39.35■■■■□ 3.89
CYLD-208ENST00000564634 SENP3Q9H4L4 574 aaPredicted RBP39.33■■■■□ 3.89
CYLD-208ENST00000564634 SCAF11Q99590 1463 aaKnown RBP39.31■■■■□ 3.88
CYLD-208ENST00000564634 CROCC2H7BZ55 1655 aa39.3■■■■□ 3.88
CYLD-208ENST00000564634 KIF15Q9NS87 1388 aa39.3■■■■□ 3.88
CYLD-208ENST00000564634 PRDM15P57071 1507 aaPredicted RBP39.3■■■■□ 3.88
CYLD-208ENST00000564634 ABCC5O15440 1437 aa39.23■■■■□ 3.87
CYLD-208ENST00000564634 ERBINQ96RT1 1412 aa39.23■■■■□ 3.87
CYLD-208ENST00000564634 PHF23Q9BUL5 403 aaPredicted RBP39.22■■■■□ 3.87
CYLD-208ENST00000564634 RRP7BPQ9NSQ0 103 aa39.22■■■■□ 3.87
CYLD-208ENST00000564634 ARHGAP23Q9P227 1491 aa39.22■■■■□ 3.87
CYLD-208ENST00000564634 PTPN23Q9H3S7 1636 aa39.22■■■■□ 3.87
CYLD-208ENST00000564634 SLIT1O75093 1534 aa39.21■■■■□ 3.87
CYLD-208ENST00000564634 LTKP29376 864 aa39.21■■■■□ 3.87
CYLD-208ENST00000564634 ARHGAP31Q2M1Z3 1444 aa39.2■■■■□ 3.87
CYLD-208ENST00000564634 TXNDC2Q86VQ3 553 aa39.18■■■■□ 3.86
CYLD-208ENST00000564634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.18■■■■□ 3.86
CYLD-208ENST00000564634 PIK3C2BO00750 1634 aa39.18■■■■□ 3.86
CYLD-208ENST00000564634 DAPK1P53355 1430 aa39.14■■■■□ 3.86
CYLD-208ENST00000564634 XIRP1Q702N8 1843 aaKnown RBP39.1■■■■□ 3.85
CYLD-208ENST00000564634 EID1Q9Y6B2 187 aa39.09■■■■□ 3.85
CYLD-208ENST00000564634 KANK1Q14678 1352 aa39.08■■■■□ 3.85
CYLD-208ENST00000564634 TMEM2Q9UHN6 1383 aa39.05■■■■□ 3.84
CYLD-208ENST00000564634 FGD6Q6ZV73 1430 aa39.05■■■■□ 3.84
CYLD-208ENST00000564634 STAG3Q9UJ98 1225 aa39.04■■■■□ 3.84
CYLD-208ENST00000564634 CHIC2Q9UKJ5 165 aa39.02■■■■□ 3.84
CYLD-208ENST00000564634 EFCAB6Q5THR3 1501 aa39.02■■■■□ 3.84
CYLD-208ENST00000564634 LMTK2Q8IWU2 1503 aa38.99■■■■□ 3.83
CYLD-208ENST00000564634 ANKRD30AQ9BXX3 1397 aa38.97■■■■□ 3.83
CYLD-208ENST00000564634 KDM5AP29375 1690 aaKnown RBP38.97■■■■□ 3.83
CYLD-208ENST00000564634 IDI1Q13907 227 aa38.94■■■■□ 3.82
CYLD-208ENST00000564634 TMEM94Q12767 1356 aa38.91■■■■□ 3.82
CYLD-208ENST00000564634 ADGRB3O60242 1522 aa38.9■■■■□ 3.82
CYLD-208ENST00000564634 SLC26A8Q96RN1 970 aa38.87■■■■□ 3.81
CYLD-208ENST00000564634 NOS1P29475 1434 aa38.87■■■■□ 3.81
CYLD-208ENST00000564634 TET3O43151 1660 aa38.86■■■■□ 3.81
CYLD-208ENST00000564634 RBM33Q96EV2 1170 aaKnown RBP38.84■■■■□ 3.81
CYLD-208ENST00000564634 FAM135BQ49AJ0 1406 aa38.83■■■■□ 3.81
CYLD-208ENST00000564634 KCNA6P17658 529 aa38.82■■■■□ 3.8
CYLD-208ENST00000564634 RGS17Q9UGC6 210 aaPredicted RBP38.82■■■■□ 3.8
CYLD-208ENST00000564634 ROBO1Q9Y6N7 1651 aa38.81■■■■□ 3.8
CYLD-208ENST00000564634 ADGRL2O95490 1459 aa38.8■■■■□ 3.8
CYLD-208ENST00000564634 PROSER2Q86WR7 435 aaPredicted RBP38.79■■■■□ 3.8
CYLD-208ENST00000564634 NWD1Q149M9 1564 aa38.78■■■■□ 3.8
CYLD-208ENST00000564634 NKTRP30414 1462 aaKnown RBP38.75■■■■□ 3.79
CYLD-208ENST00000564634 BCANQ96GW7 911 aa38.75■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms