RNA–Protein interactions for RNA: ENST00000564631.5

TMX3-206, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-206ENST00000564631 CDK12Q9NYV4 1490 aaPredicted RBP9.93□□□□□ -0.82
TMX3-206ENST00000564631 CAMSAP1Q5T5Y3 1602 aa9.92□□□□□ -0.82
TMX3-206ENST00000564631 PTPRGP23470 1445 aa9.91□□□□□ -0.82
TMX3-206ENST00000564631 ZCCHC11Q5TAX3 1644 aaKnown RBP9.91□□□□□ -0.82
TMX3-206ENST00000564631 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
TMX3-206ENST00000564631 UHRF1BP1LA0JNW5 1464 aa9.9□□□□□ -0.82
TMX3-206ENST00000564631 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
TMX3-206ENST00000564631 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.83
TMX3-206ENST00000564631 CEP350Q5VT06 3117 aa9.89□□□□□ -0.83
TMX3-206ENST00000564631 RAPGEF3O95398 923 aa9.89□□□□□ -0.83
TMX3-206ENST00000564631 PDAP1Q13442 181 aaKnown RBP9.89□□□□□ -0.83
TMX3-206ENST00000564631 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
TMX3-206ENST00000564631 MLECQ14165 292 aa9.88□□□□□ -0.83
TMX3-206ENST00000564631 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
TMX3-206ENST00000564631 NHSL1Q5SYE7 1610 aa9.88□□□□□ -0.83
TMX3-206ENST00000564631 PRELPP51888 382 aa9.87□□□□□ -0.83
TMX3-206ENST00000564631 WDR7Q9Y4E6 1490 aa9.87□□□□□ -0.83
TMX3-206ENST00000564631 KDM5BQ9UGL1 1544 aa9.87□□□□□ -0.83
TMX3-206ENST00000564631 TIMELESSQ9UNS1 1208 aa9.87□□□□□ -0.83
TMX3-206ENST00000564631 TMEM132AQ24JP5 1023 aa9.86□□□□□ -0.83
TMX3-206ENST00000564631 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
TMX3-206ENST00000564631 GTF3C3Q9Y5Q9 886 aa9.86□□□□□ -0.83
TMX3-206ENST00000564631 ARHGEF12Q9NZN5 1544 aa9.86□□□□□ -0.83
TMX3-206ENST00000564631 RXRBP28702 533 aa9.85□□□□□ -0.83
TMX3-206ENST00000564631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
TMX3-206ENST00000564631 TTBK1Q5TCY1 1321 aaPredicted RBP9.85□□□□□ -0.83
TMX3-206ENST00000564631 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
TMX3-206ENST00000564631 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
TMX3-206ENST00000564631 MFRPQ9BY79 579 aa9.84□□□□□ -0.83
TMX3-206ENST00000564631 WDR70Q9NW82 654 aa9.84□□□□□ -0.83
TMX3-206ENST00000564631 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
TMX3-206ENST00000564631 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
TMX3-206ENST00000564631 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
TMX3-206ENST00000564631 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
TMX3-206ENST00000564631 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
TMX3-206ENST00000564631 FARP1Q9Y4F1 1045 aaPredicted RBP9.82□□□□□ -0.84
TMX3-206ENST00000564631 TOP2AP11388 1531 aaKnown RBP9.81□□□□□ -0.84
TMX3-206ENST00000564631 ABCA10Q8WWZ4 1543 aa9.81□□□□□ -0.84
TMX3-206ENST00000564631 TULP1O00294 542 aaPredicted RBP9.81□□□□□ -0.84
TMX3-206ENST00000564631 CHADLQ6NUI6 762 aa9.81□□□□□ -0.84
TMX3-206ENST00000564631 PCDHB8Q9UN66 801 aa9.81□□□□□ -0.84
TMX3-206ENST00000564631 PCDHB13Q9Y5F0 798 aa9.81□□□□□ -0.84
TMX3-206ENST00000564631 RNF17Q9BXT8 1623 aaKnown RBP9.8□□□□□ -0.84
TMX3-206ENST00000564631 AKNAQ7Z591 1439 aa9.8□□□□□ -0.84
TMX3-206ENST00000564631 PSEN1P49768 467 aa9.8□□□□□ -0.84
TMX3-206ENST00000564631 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
TMX3-206ENST00000564631 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
TMX3-206ENST00000564631 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
TMX3-206ENST00000564631 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
TMX3-206ENST00000564631 ERICH6Q7L0X2 663 aa9.79□□□□□ -0.84
TMX3-206ENST00000564631 NUTM2AQ8IVF1 878 aaPredicted RBP9.79□□□□□ -0.84
TMX3-206ENST00000564631 C3P01024 1663 aa9.79□□□□□ -0.84
TMX3-206ENST00000564631 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
TMX3-206ENST00000564631 SUPT6HQ7KZ85 1726 aaKnown RBP9.78□□□□□ -0.84
TMX3-206ENST00000564631 ATAD2Q6PL18 1390 aa9.77□□□□□ -0.85
TMX3-206ENST00000564631 FBXO22Q8NEZ5 403 aa9.77□□□□□ -0.85
TMX3-206ENST00000564631 ARHGEF1Q92888 912 aaKnown RBP9.77□□□□□ -0.85
TMX3-206ENST00000564631 RGS12O14924 1447 aa9.76□□□□□ -0.85
TMX3-206ENST00000564631 TNIKQ9UKE5 1360 aa9.75□□□□□ -0.85
TMX3-206ENST00000564631 PLA2R1Q13018 1463 aa9.74□□□□□ -0.85
TMX3-206ENST00000564631 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
TMX3-206ENST00000564631 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
TMX3-206ENST00000564631 PPP1R37O75864 691 aa9.73□□□□□ -0.85
TMX3-206ENST00000564631 KCNH8Q96L42 1107 aa9.73□□□□□ -0.85
TMX3-206ENST00000564631 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
TMX3-206ENST00000564631 SOX12O15370 315 aa9.72□□□□□ -0.85
TMX3-206ENST00000564631 ZFYVE16Q7Z3T8 1539 aa9.71□□□□□ -0.86
TMX3-206ENST00000564631 NLRP6P59044 892 aa9.71□□□□□ -0.86
TMX3-206ENST00000564631 E2F4Q16254 413 aa9.71□□□□□ -0.86
TMX3-206ENST00000564631 NEO1Q92859 1461 aa9.7□□□□□ -0.86
TMX3-206ENST00000564631 HRCP23327 699 aa9.7□□□□□ -0.86
TMX3-206ENST00000564631 IFNL1Q8IU54 200 aa9.7□□□□□ -0.86
TMX3-206ENST00000564631 EFCAB5A4FU69 1503 aa9.7□□□□□ -0.86
TMX3-206ENST00000564631 RAPGEF2Q9Y4G8 1499 aa9.69□□□□□ -0.86
TMX3-206ENST00000564631 EFCAB3Q8N7B9 438 aa9.69□□□□□ -0.86
TMX3-206ENST00000564631 CCDC88BA6NC98 1476 aa9.68□□□□□ -0.86
TMX3-206ENST00000564631 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
TMX3-206ENST00000564631 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
TMX3-206ENST00000564631 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
TMX3-206ENST00000564631 MEX3CQ5U5Q3 659 aaKnown RBP9.67□□□□□ -0.86
TMX3-206ENST00000564631 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
TMX3-206ENST00000564631 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
TMX3-206ENST00000564631 ZC3H15Q8WU90 426 aaKnown RBP9.67□□□□□ -0.86
TMX3-206ENST00000564631 LRP6O75581 1613 aa9.67□□□□□ -0.86
TMX3-206ENST00000564631 ERICH3Q5RHP9 1530 aa9.67□□□□□ -0.86
TMX3-206ENST00000564631 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMX3-206ENST00000564631 COL13A1Q5TAT6 717 aaPredicted RBP9.66□□□□□ -0.86
TMX3-206ENST00000564631 KIF12Q96FN5 646 aa9.66□□□□□ -0.86
TMX3-206ENST00000564631 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
TMX3-206ENST00000564631 VWDEQ8N2E2 1590 aa9.66□□□□□ -0.86
TMX3-206ENST00000564631 CABP2Q9NPB3 220 aa9.66□□□□□ -0.86
TMX3-206ENST00000564631 ZNF142P52746 1687 aaPredicted RBP9.65□□□□□ -0.86
TMX3-206ENST00000564631 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.86
TMX3-206ENST00000564631 MAP3K13O43283 966 aa9.65□□□□□ -0.86
TMX3-206ENST00000564631 ZMYM4Q5VZL5 1548 aa9.65□□□□□ -0.87
TMX3-206ENST00000564631 BCL9LQ86UU0 1499 aa9.64□□□□□ -0.87
TMX3-206ENST00000564631 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
TMX3-206ENST00000564631 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
TMX3-206ENST00000564631 CDK13Q14004 1512 aaKnown RBP9.63□□□□□ -0.87
TMX3-206ENST00000564631 PSDA5PKW4 1024 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms