RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 EIF2AK4Q9P2K8 1649 aaKnown RBP22.35■■□□□ 1.17
COMMD4-210ENST00000564587 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
COMMD4-210ENST00000564587 KIDINS220Q9ULH0 1771 aa22.33■■□□□ 1.16
COMMD4-210ENST00000564587 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
COMMD4-210ENST00000564587 KDM4FA0A1W2PPD8 638 aa22.31■■□□□ 1.16
COMMD4-210ENST00000564587 FOXD1Q16676 465 aa22.31■■□□□ 1.16
COMMD4-210ENST00000564587 DEPDC5O75140 1603 aa22.28■■□□□ 1.16
COMMD4-210ENST00000564587 KANK1Q14678 1352 aa22.28■■□□□ 1.16
COMMD4-210ENST00000564587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.15
COMMD4-210ENST00000564587 A2MP01023 1474 aa22.26■■□□□ 1.15
COMMD4-210ENST00000564587 RICTORQ6R327 1708 aa22.25■■□□□ 1.15
COMMD4-210ENST00000564587 ATP10AO60312 1499 aa22.21■■□□□ 1.15
COMMD4-210ENST00000564587 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
COMMD4-210ENST00000564587 BCORL1Q5H9F3 1711 aa22.2■■□□□ 1.14
COMMD4-210ENST00000564587 KIF3BO15066 747 aa22.2■■□□□ 1.14
COMMD4-210ENST00000564587 L3MBTL2Q969R5 705 aa22.2■■□□□ 1.14
COMMD4-210ENST00000564587 PRDM15P57071 1507 aaPredicted RBP22.2■■□□□ 1.14
COMMD4-210ENST00000564587 VWDEQ8N2E2 1590 aa22.2■■□□□ 1.14
COMMD4-210ENST00000564587 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
COMMD4-210ENST00000564587 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
COMMD4-210ENST00000564587 TET3O43151 1660 aa22.18■■□□□ 1.14
COMMD4-210ENST00000564587 RNF17Q9BXT8 1623 aaKnown RBP22.18■■□□□ 1.14
COMMD4-210ENST00000564587 RAPGEF3O95398 923 aa22.18■■□□□ 1.14
COMMD4-210ENST00000564587 TSPOAP1O95153 1857 aa22.17■■□□□ 1.14
COMMD4-210ENST00000564587 DIEXFQ68CQ4 756 aaKnown RBP22.17■■□□□ 1.14
COMMD4-210ENST00000564587 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
COMMD4-210ENST00000564587 CCDC144AA2RUR9 1427 aa22.16■■□□□ 1.14
COMMD4-210ENST00000564587 DIP2CQ9Y2E4 1556 aa22.14■■□□□ 1.13
COMMD4-210ENST00000564587 LMTK2Q8IWU2 1503 aa22.13■■□□□ 1.13
COMMD4-210ENST00000564587 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
COMMD4-210ENST00000564587 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
COMMD4-210ENST00000564587 E9PCH4 1651 aa22.1■■□□□ 1.13
COMMD4-210ENST00000564587 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
COMMD4-210ENST00000564587 PTPRTO14522 1441 aa22.08■■□□□ 1.13
COMMD4-210ENST00000564587 REREQ9P2R6 1566 aa22.06■■□□□ 1.12
COMMD4-210ENST00000564587 TRPM2O94759 1503 aa22.06■■□□□ 1.12
COMMD4-210ENST00000564587 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
COMMD4-210ENST00000564587 SPHKAPQ2M3C7 1700 aa22.05■■□□□ 1.12
COMMD4-210ENST00000564587 EFCAB6Q5THR3 1501 aa22.05■■□□□ 1.12
COMMD4-210ENST00000564587 YEATS2Q9ULM3 1422 aa22.03■■□□□ 1.12
COMMD4-210ENST00000564587 STAC3Q96MF2 364 aa22.02■■□□□ 1.12
COMMD4-210ENST00000564587 ZC3H13Q5T200 1668 aaKnown RBP22.01■■□□□ 1.11
COMMD4-210ENST00000564587 EIF4G2P78344 907 aaKnown RBP eCLIP22■■□□□ 1.11
COMMD4-210ENST00000564587 GGT6Q6P531 493 aa22■■□□□ 1.11
COMMD4-210ENST00000564587 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
COMMD4-210ENST00000564587 AGLP35573 1532 aa22■■□□□ 1.11
COMMD4-210ENST00000564587 NEURL4Q96JN8 1562 aa21.99■■□□□ 1.11
COMMD4-210ENST00000564587 NBPF8Q3BBV2 869 aa21.99■■□□□ 1.11
COMMD4-210ENST00000564587 CEP152O94986 1710 aa21.99■■□□□ 1.11
COMMD4-210ENST00000564587 WASHC2CQ9Y4E1 1318 aa21.98■■□□□ 1.11
COMMD4-210ENST00000564587 ABCC3O15438 1527 aa21.97■■□□□ 1.11
COMMD4-210ENST00000564587 DCAF11Q8TEB1 546 aa21.95■■□□□ 1.1
COMMD4-210ENST00000564587 ARHGAP31Q2M1Z3 1444 aa21.95■■□□□ 1.1
COMMD4-210ENST00000564587 SPATA31E1Q6ZUB1 1445 aa21.94■■□□□ 1.1
COMMD4-210ENST00000564587 RALGAPBQ86X10 1494 aa21.94■■□□□ 1.1
COMMD4-210ENST00000564587 ARHGEF40Q8TER5 1519 aa21.93■■□□□ 1.1
COMMD4-210ENST00000564587 CAMSAP1Q5T5Y3 1602 aa21.92■■□□□ 1.1
COMMD4-210ENST00000564587 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
COMMD4-210ENST00000564587 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
COMMD4-210ENST00000564587 COL17A1Q9UMD9 1497 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-210ENST00000564587 NPATQ14207 1427 aa21.9■■□□□ 1.1
COMMD4-210ENST00000564587 HSPA5P11021 654 aaKnown RBP21.9■■□□□ 1.1
COMMD4-210ENST00000564587 RGL3Q3MIN7 710 aa21.89■■□□□ 1.09
COMMD4-210ENST00000564587 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.09
COMMD4-210ENST00000564587 KIF1BO60333 1816 aa21.88■■□□□ 1.09
COMMD4-210ENST00000564587 ZNF326Q5BKZ1 582 aaKnown RBP21.88■■□□□ 1.09
COMMD4-210ENST00000564587 KDM2AQ9Y2K7 1162 aa21.88■■□□□ 1.09
COMMD4-210ENST00000564587 NOS1P29475 1434 aa21.85■■□□□ 1.09
COMMD4-210ENST00000564587 TRPM1Q7Z4N2 1603 aa21.82■■□□□ 1.08
COMMD4-210ENST00000564587 LAMC1P11047 1609 aa21.81■■□□□ 1.08
COMMD4-210ENST00000564587 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
COMMD4-210ENST00000564587 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
COMMD4-210ENST00000564587 GPRASP1Q5JY77 1395 aa21.8■■□□□ 1.08
COMMD4-210ENST00000564587 USP47Q96K76 1375 aa21.8■■□□□ 1.08
COMMD4-210ENST00000564587 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
COMMD4-210ENST00000564587 SLC52A1Q9NWF4 448 aa21.79■■□□□ 1.08
COMMD4-210ENST00000564587 RPGRIP1LQ68CZ1 1315 aa21.79■■□□□ 1.08
COMMD4-210ENST00000564587 MYOM2P54296 1465 aa21.77■■□□□ 1.08
COMMD4-210ENST00000564587 ADGRB3O60242 1522 aa21.77■■□□□ 1.08
COMMD4-210ENST00000564587 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.07
COMMD4-210ENST00000564587 CFAP65Q6ZU64 1925 aaKnown RBP21.76■■□□□ 1.07
COMMD4-210ENST00000564587 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
COMMD4-210ENST00000564587 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
COMMD4-210ENST00000564587 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-210ENST00000564587 MADDQ8WXG6 1647 aa21.75■■□□□ 1.07
COMMD4-210ENST00000564587 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
COMMD4-210ENST00000564587 MIER1Q8N108 512 aa21.74■■□□□ 1.07
COMMD4-210ENST00000564587 FBXO41Q8TF61 875 aa21.74■■□□□ 1.07
COMMD4-210ENST00000564587 PREX1Q8TCU6 1659 aa21.74■■□□□ 1.07
COMMD4-210ENST00000564587 SIGLEC1Q9BZZ2 1709 aa21.74■■□□□ 1.07
COMMD4-210ENST00000564587 KIAA1210Q9ULL0 1709 aa21.74■■□□□ 1.07
COMMD4-210ENST00000564587 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
COMMD4-210ENST00000564587 IFT172Q9UG01 1749 aa21.72■■□□□ 1.07
COMMD4-210ENST00000564587 SYNMO15061 1565 aa21.72■■□□□ 1.07
COMMD4-210ENST00000564587 CCDC7Q96M83 1385 aa21.71■■□□□ 1.07
COMMD4-210ENST00000564587 CLTCQ00610 1675 aaKnown RBP21.7■■□□□ 1.06
COMMD4-210ENST00000564587 WASHC2AQ641Q2 1341 aa21.7■■□□□ 1.06
COMMD4-210ENST00000564587 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
COMMD4-210ENST00000564587 ERVK-7P63135 1459 aa21.69■■□□□ 1.06
COMMD4-210ENST00000564587 CHGAP10645 457 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms