RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
TCF4-222ENST00000564228 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
TCF4-222ENST00000564228 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
TCF4-222ENST00000564228 POGZQ7Z3K3 1410 aa15.42■□□□□ 0.06
TCF4-222ENST00000564228 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
TCF4-222ENST00000564228 ATP7AQ04656 1500 aa15.42■□□□□ 0.06
TCF4-222ENST00000564228 ANKRD50Q9ULJ7 1429 aa15.41■□□□□ 0.06
TCF4-222ENST00000564228 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
TCF4-222ENST00000564228 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
TCF4-222ENST00000564228 TRIM52Q96A61 297 aa15.41■□□□□ 0.06
TCF4-222ENST00000564228 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
TCF4-222ENST00000564228 KIDINS220Q9ULH0 1771 aa15.4■□□□□ 0.06
TCF4-222ENST00000564228 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
TCF4-222ENST00000564228 RTEL1-TNFRSF6BF6WH68 1400 aa15.39■□□□□ 0.05
TCF4-222ENST00000564228 KDM5CP41229 1560 aa15.39■□□□□ 0.05
TCF4-222ENST00000564228 RAPGEF3O95398 923 aa15.39■□□□□ 0.05
TCF4-222ENST00000564228 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
TCF4-222ENST00000564228 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
TCF4-222ENST00000564228 FRMPD1Q5SYB0 1578 aa15.35■□□□□ 0.05
TCF4-222ENST00000564228 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
TCF4-222ENST00000564228 ABCA6Q8N139 1617 aa15.33■□□□□ 0.04
TCF4-222ENST00000564228 ERBINQ96RT1 1412 aa15.33■□□□□ 0.04
TCF4-222ENST00000564228 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
TCF4-222ENST00000564228 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
TCF4-222ENST00000564228 DEKP35659 375 aaKnown RBP15.3■□□□□ 0.04
TCF4-222ENST00000564228 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
TCF4-222ENST00000564228 NUP155O75694 1391 aa15.29■□□□□ 0.04
TCF4-222ENST00000564228 UNC13BO14795 1591 aa15.29■□□□□ 0.04
TCF4-222ENST00000564228 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
TCF4-222ENST00000564228 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
TCF4-222ENST00000564228 PZPP20742 1482 aa15.28■□□□□ 0.04
TCF4-222ENST00000564228 COL17A1Q9UMD9 1497 aaPredicted RBP15.28■□□□□ 0.04
TCF4-222ENST00000564228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
TCF4-222ENST00000564228 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
TCF4-222ENST00000564228 A2MP01023 1474 aa15.28■□□□□ 0.04
TCF4-222ENST00000564228 EIF2AK4Q9P2K8 1649 aaKnown RBP15.27■□□□□ 0.04
TCF4-222ENST00000564228 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.03
TCF4-222ENST00000564228 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.03
TCF4-222ENST00000564228 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
TCF4-222ENST00000564228 DDX10Q13206 875 aaKnown RBP15.26■□□□□ 0.03
TCF4-222ENST00000564228 FOXD1Q16676 465 aa15.25■□□□□ 0.03
TCF4-222ENST00000564228 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
TCF4-222ENST00000564228 KIF3BO15066 747 aa15.25■□□□□ 0.03
TCF4-222ENST00000564228 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
TCF4-222ENST00000564228 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
TCF4-222ENST00000564228 ANP32CO43423 234 aa15.24■□□□□ 0.03
TCF4-222ENST00000564228 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
TCF4-222ENST00000564228 MAGI2Q86UL8 1455 aa15.23■□□□□ 0.03
TCF4-222ENST00000564228 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
TCF4-222ENST00000564228 PKD2Q13563 968 aa15.21■□□□□ 0.03
TCF4-222ENST00000564228 BCORL1Q5H9F3 1711 aa15.2■□□□□ 0.02
TCF4-222ENST00000564228 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
TCF4-222ENST00000564228 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
TCF4-222ENST00000564228 PRDM15P57071 1507 aaPredicted RBP15.19■□□□□ 0.02
TCF4-222ENST00000564228 ARHGEF40Q8TER5 1519 aa15.18■□□□□ 0.02
TCF4-222ENST00000564228 ATP10AO60312 1499 aa15.18■□□□□ 0.02
TCF4-222ENST00000564228 CEP152O94986 1710 aa15.18■□□□□ 0.02
TCF4-222ENST00000564228 KANK1Q14678 1352 aa15.18■□□□□ 0.02
TCF4-222ENST00000564228 GGT6Q6P531 493 aa15.17■□□□□ 0.02
TCF4-222ENST00000564228 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
TCF4-222ENST00000564228 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
TCF4-222ENST00000564228 TET3O43151 1660 aa15.16■□□□□ 0.02
TCF4-222ENST00000564228 PPP4R2Q9NY27 417 aa15.15■□□□□ 0.02
TCF4-222ENST00000564228 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
TCF4-222ENST00000564228 E9PCH4 1651 aa15.15■□□□□ 0.02
TCF4-222ENST00000564228 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
TCF4-222ENST00000564228 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
TCF4-222ENST00000564228 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
TCF4-222ENST00000564228 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
TCF4-222ENST00000564228 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
TCF4-222ENST00000564228 SPHKAPQ2M3C7 1700 aa15.1■□□□□ 0.01
TCF4-222ENST00000564228 AGLP35573 1532 aa15.1■□□□□ 0.01
TCF4-222ENST00000564228 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
TCF4-222ENST00000564228 EFCAB6Q5THR3 1501 aa15.09■□□□□ 0.01
TCF4-222ENST00000564228 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
TCF4-222ENST00000564228 ZC3H13Q5T200 1668 aaKnown RBP15.08■□□□□ 0.01
TCF4-222ENST00000564228 ABCC3O15438 1527 aa15.08■□□□□ 0.01
TCF4-222ENST00000564228 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
TCF4-222ENST00000564228 LMTK2Q8IWU2 1503 aa15.07■□□□□ 0
TCF4-222ENST00000564228 ZBTB22O15209 634 aa15.07■□□□□ 0
TCF4-222ENST00000564228 MLECQ14165 292 aa15.07■□□□□ 0
TCF4-222ENST00000564228 ANO8Q9HCE9 1232 aaPredicted RBP15.07■□□□□ 0
TCF4-222ENST00000564228 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
TCF4-222ENST00000564228 CCDC144AA2RUR9 1427 aa15.05■□□□□ 0
TCF4-222ENST00000564228 PLA2R1Q13018 1463 aa15.05■□□□□ 0
TCF4-222ENST00000564228 CLTCQ00610 1675 aaKnown RBP15.04■□□□□ -0
TCF4-222ENST00000564228 HNRNPUQ00839 825 aaKnown RBP eCLIP15.04■□□□□ -0
TCF4-222ENST00000564228 TRPM2O94759 1503 aa15.02■□□□□ -0
TCF4-222ENST00000564228 NPATQ14207 1427 aa15.02■□□□□ -0
TCF4-222ENST00000564228 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
TCF4-222ENST00000564228 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
TCF4-222ENST00000564228 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
TCF4-222ENST00000564228 PTPRTO14522 1441 aa15□□□□□ -0.01
TCF4-222ENST00000564228 IRX6P78412 446 aaPredicted RBP14.99□□□□□ -0.01
TCF4-222ENST00000564228 RTL5Q5HYW3 569 aaPredicted RBP14.99□□□□□ -0.01
TCF4-222ENST00000564228 KIF1BO60333 1816 aa14.99□□□□□ -0.01
TCF4-222ENST00000564228 UGGT1Q9NYU2 1555 aa14.99□□□□□ -0.01
TCF4-222ENST00000564228 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
TCF4-222ENST00000564228 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
TCF4-222ENST00000564228 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms