RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 A2ML1A8K2U0 1454 aa33.12■■■□□ 2.89
HERC2-204ENST00000563945 FBXO31Q5XUX0 539 aaPredicted RBP33.1■■■□□ 2.89
HERC2-204ENST00000563945 TNRQ92752 1358 aa33.09■■■□□ 2.89
HERC2-204ENST00000563945 UBAP1LF5GYI3 381 aa33.09■■■□□ 2.89
HERC2-204ENST00000563945 TCOF1Q13428 1488 aaKnown RBP33.09■■■□□ 2.89
HERC2-204ENST00000563945 KDM5DQ9BY66 1539 aa33.04■■■□□ 2.88
HERC2-204ENST00000563945 LOC105371045A0A1W2PR82 267 aa33.04■■■□□ 2.88
HERC2-204ENST00000563945 VPS8Q8N3P4 1428 aa33.03■■■□□ 2.88
HERC2-204ENST00000563945 FAM135AQ9P2D6 1515 aa33.02■■■□□ 2.88
HERC2-204ENST00000563945 DNMT1P26358 1616 aaKnown RBP33.02■■■□□ 2.88
HERC2-204ENST00000563945 PZPP20742 1482 aa33.01■■■□□ 2.88
HERC2-204ENST00000563945 THEMISQ8N1K5 641 aaPredicted RBP33.01■■■□□ 2.87
HERC2-204ENST00000563945 ARHGEF5Q12774 1597 aa33■■■□□ 2.87
HERC2-204ENST00000563945 LRRC9Q6ZRR7 1453 aa33■■■□□ 2.87
HERC2-204ENST00000563945 ANKLE2Q86XL3 938 aa32.99■■■□□ 2.87
HERC2-204ENST00000563945 MIA2Q96PC5 1412 aa32.95■■■□□ 2.87
HERC2-204ENST00000563945 ILDR2Q71H61 639 aa32.95■■■□□ 2.87
HERC2-204ENST00000563945 KANK4Q5T7N3 995 aaPredicted RBP32.91■■■□□ 2.86
HERC2-204ENST00000563945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.91■■■□□ 2.86
HERC2-204ENST00000563945 NLRP1Q9C000 1473 aa32.91■■■□□ 2.86
HERC2-204ENST00000563945 SPATA31D1Q6ZQQ2 1576 aa32.89■■■□□ 2.86
HERC2-204ENST00000563945 APLP2Q06481 763 aa32.89■■■□□ 2.86
HERC2-204ENST00000563945 SCAF1Q9H7N4 1312 aaKnown RBP32.88■■■□□ 2.85
HERC2-204ENST00000563945 POLR1AO95602 1720 aaPredicted RBP32.86■■■□□ 2.85
HERC2-204ENST00000563945 UGGT1Q9NYU2 1555 aa32.85■■■□□ 2.85
HERC2-204ENST00000563945 SOCS7O14512 581 aa32.85■■■□□ 2.85
HERC2-204ENST00000563945 TOM1O60784 492 aa32.85■■■□□ 2.85
HERC2-204ENST00000563945 MAP3K1Q13233 1512 aa32.85■■■□□ 2.85
HERC2-204ENST00000563945 MYOM3Q5VTT5 1437 aa32.85■■■□□ 2.85
HERC2-204ENST00000563945 MAST1Q9Y2H9 1570 aa32.83■■■□□ 2.85
HERC2-204ENST00000563945 SHANK2Q9UPX8 1470 aa32.82■■■□□ 2.84
HERC2-204ENST00000563945 CPS1P31327 1500 aa32.82■■■□□ 2.84
HERC2-204ENST00000563945 PIP4K2BP78356 416 aa32.81■■■□□ 2.84
HERC2-204ENST00000563945 NEURL4Q96JN8 1562 aa32.79■■■□□ 2.84
HERC2-204ENST00000563945 NPHP4O75161 1426 aaPredicted RBP32.78■■■□□ 2.84
HERC2-204ENST00000563945 RNF17Q9BXT8 1623 aaKnown RBP32.78■■■□□ 2.84
HERC2-204ENST00000563945 ABCC3O15438 1527 aa32.77■■■□□ 2.84
HERC2-204ENST00000563945 ZC3H13Q5T200 1668 aaKnown RBP32.75■■■□□ 2.83
HERC2-204ENST00000563945 EIF2AK4Q9P2K8 1649 aaKnown RBP32.75■■■□□ 2.83
HERC2-204ENST00000563945 DUOX2Q9NRD8 1548 aa32.72■■■□□ 2.83
HERC2-204ENST00000563945 MED14O60244 1454 aa32.72■■■□□ 2.83
HERC2-204ENST00000563945 RRP7BPQ9NSQ0 103 aa32.71■■■□□ 2.83
HERC2-204ENST00000563945 DEPDC5O75140 1603 aa32.7■■■□□ 2.83
HERC2-204ENST00000563945 ERVK-7P63135 1459 aa32.7■■■□□ 2.83
HERC2-204ENST00000563945 KIF15Q9NS87 1388 aa32.69■■■□□ 2.82
HERC2-204ENST00000563945 HSPA1LP34931 641 aa32.67■■■□□ 2.82
HERC2-204ENST00000563945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.67■■■□□ 2.82
HERC2-204ENST00000563945 CFAP65Q6ZU64 1925 aaKnown RBP32.66■■■□□ 2.82
HERC2-204ENST00000563945 VWDEQ8N2E2 1590 aa32.65■■■□□ 2.82
HERC2-204ENST00000563945 IQGAP1P46940 1657 aa32.63■■■□□ 2.81
HERC2-204ENST00000563945 KANK1Q14678 1352 aa32.62■■■□□ 2.81
HERC2-204ENST00000563945 CEP152O94986 1710 aa32.62■■■□□ 2.81
HERC2-204ENST00000563945 ABCC5O15440 1437 aa32.61■■■□□ 2.81
HERC2-204ENST00000563945 MROH1Q8NDA8 1641 aa32.61■■■□□ 2.81
HERC2-204ENST00000563945 ERBINQ96RT1 1412 aa32.6■■■□□ 2.81
HERC2-204ENST00000563945 STAG3Q9UJ98 1225 aa32.6■■■□□ 2.81
HERC2-204ENST00000563945 EID1Q9Y6B2 187 aa32.6■■■□□ 2.81
HERC2-204ENST00000563945 TXNDC2Q86VQ3 553 aa32.59■■■□□ 2.81
HERC2-204ENST00000563945 PTPN23Q9H3S7 1636 aa32.59■■■□□ 2.81
HERC2-204ENST00000563945 CHIC2Q9UKJ5 165 aa32.56■■■□□ 2.8
HERC2-204ENST00000563945 ARHGAP31Q2M1Z3 1444 aa32.56■■■□□ 2.8
HERC2-204ENST00000563945 DAPK1P53355 1430 aa32.55■■■□□ 2.8
HERC2-204ENST00000563945 ANKRD30AQ9BXX3 1397 aa32.54■■■□□ 2.8
HERC2-204ENST00000563945 SCAF11Q99590 1463 aaKnown RBP32.54■■■□□ 2.8
HERC2-204ENST00000563945 FGD6Q6ZV73 1430 aa32.51■■■□□ 2.8
HERC2-204ENST00000563945 PRDM15P57071 1507 aaPredicted RBP32.51■■■□□ 2.8
HERC2-204ENST00000563945 UBR1Q8IWV7 1749 aa32.51■■■□□ 2.8
HERC2-204ENST00000563945 CROCC2H7BZ55 1655 aa32.51■■■□□ 2.79
HERC2-204ENST00000563945 LTKP29376 864 aa32.51■■■□□ 2.79
HERC2-204ENST00000563945 LRRC7Q96NW7 1537 aa32.49■■■□□ 2.79
HERC2-204ENST00000563945 SENP3Q9H4L4 574 aaPredicted RBP32.48■■■□□ 2.79
HERC2-204ENST00000563945 ARHGAP23Q9P227 1491 aa32.44■■■□□ 2.78
HERC2-204ENST00000563945 PHF23Q9BUL5 403 aaPredicted RBP32.44■■■□□ 2.78
HERC2-204ENST00000563945 SLIT1O75093 1534 aa32.44■■■□□ 2.78
HERC2-204ENST00000563945 SYNMO15061 1565 aa32.43■■■□□ 2.78
HERC2-204ENST00000563945 MED1Q15648 1581 aaPredicted RBP32.41■■■□□ 2.78
HERC2-204ENST00000563945 STRCP1A6NGW2 1772 aa32.41■■■□□ 2.78
HERC2-204ENST00000563945 FAM50AQ14320 339 aaKnown RBP32.41■■■□□ 2.78
HERC2-204ENST00000563945 TMEM2Q9UHN6 1383 aa32.41■■■□□ 2.78
HERC2-204ENST00000563945 IDI1Q13907 227 aa32.4■■■□□ 2.78
HERC2-204ENST00000563945 PIK3C2BO00750 1634 aa32.37■■■□□ 2.77
HERC2-204ENST00000563945 ALKQ9UM73 1620 aa32.35■■■□□ 2.77
HERC2-204ENST00000563945 BCANQ96GW7 911 aa32.34■■■□□ 2.77
HERC2-204ENST00000563945 LMTK2Q8IWU2 1503 aa32.34■■■□□ 2.77
HERC2-204ENST00000563945 EFCAB6Q5THR3 1501 aa32.33■■■□□ 2.77
HERC2-204ENST00000563945 SLC52A1Q9NWF4 448 aa32.32■■■□□ 2.76
HERC2-204ENST00000563945 SLC26A8Q96RN1 970 aa32.29■■■□□ 2.76
HERC2-204ENST00000563945 KCNA6P17658 529 aa32.28■■■□□ 2.76
HERC2-204ENST00000563945 PROSER2Q86WR7 435 aaPredicted RBP32.26■■■□□ 2.75
HERC2-204ENST00000563945 KDM5AP29375 1690 aaKnown RBP32.26■■■□□ 2.75
HERC2-204ENST00000563945 ADGRL2O95490 1459 aa32.25■■■□□ 2.75
HERC2-204ENST00000563945 ANKRD50Q9ULJ7 1429 aa32.25■■■□□ 2.75
HERC2-204ENST00000563945 HDGFP51858 240 aaKnown RBP32.24■■■□□ 2.75
HERC2-204ENST00000563945 NOS1P29475 1434 aa32.24■■■□□ 2.75
HERC2-204ENST00000563945 TMEM94Q12767 1356 aa32.21■■■□□ 2.75
HERC2-204ENST00000563945 PPP1R15AO75807 674 aaPredicted RBP32.19■■■□□ 2.74
HERC2-204ENST00000563945 ADGRB3O60242 1522 aa32.17■■■□□ 2.74
HERC2-204ENST00000563945 RPRD2Q5VT52 1461 aaKnown RBP32.16■■■□□ 2.74
HERC2-204ENST00000563945 FAM135BQ49AJ0 1406 aa32.15■■■□□ 2.74
HERC2-204ENST00000563945 XIRP1Q702N8 1843 aaKnown RBP32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms