RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
CLN6-203ENST00000563917 CEP170BQ9Y4F5 1589 aaPredicted RBP14.95□□□□□ -0.02
CLN6-203ENST00000563917 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
CLN6-203ENST00000563917 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
CLN6-203ENST00000563917 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
CLN6-203ENST00000563917 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
CLN6-203ENST00000563917 TNRQ92752 1358 aa14.94□□□□□ -0.02
CLN6-203ENST00000563917 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
CLN6-203ENST00000563917 A2ML1A8K2U0 1454 aa14.93□□□□□ -0.02
CLN6-203ENST00000563917 PZPP20742 1482 aa14.91□□□□□ -0.02
CLN6-203ENST00000563917 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
CLN6-203ENST00000563917 FBXO31Q5XUX0 539 aaPredicted RBP14.9□□□□□ -0.02
CLN6-203ENST00000563917 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
CLN6-203ENST00000563917 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
CLN6-203ENST00000563917 TCOF1Q13428 1488 aaKnown RBP14.88□□□□□ -0.03
CLN6-203ENST00000563917 ANKLE2Q86XL3 938 aa14.87□□□□□ -0.03
CLN6-203ENST00000563917 DNMT1P26358 1616 aaKnown RBP14.87□□□□□ -0.03
CLN6-203ENST00000563917 LTBP4Q8N2S1 1624 aa14.87□□□□□ -0.03
CLN6-203ENST00000563917 NLRP1Q9C000 1473 aa14.87□□□□□ -0.03
CLN6-203ENST00000563917 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
CLN6-203ENST00000563917 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
CLN6-203ENST00000563917 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
CLN6-203ENST00000563917 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
CLN6-203ENST00000563917 ZC3H13Q5T200 1668 aaKnown RBP14.84□□□□□ -0.03
CLN6-203ENST00000563917 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
CLN6-203ENST00000563917 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
CLN6-203ENST00000563917 RRP7BPQ9NSQ0 103 aa14.83□□□□□ -0.04
CLN6-203ENST00000563917 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.04
CLN6-203ENST00000563917 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
CLN6-203ENST00000563917 ABCC3O15438 1527 aa14.82□□□□□ -0.04
CLN6-203ENST00000563917 UGGT1Q9NYU2 1555 aa14.82□□□□□ -0.04
CLN6-203ENST00000563917 KANK1Q14678 1352 aa14.82□□□□□ -0.04
CLN6-203ENST00000563917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLN6-203ENST00000563917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLN6-203ENST00000563917 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
CLN6-203ENST00000563917 ERBINQ96RT1 1412 aa14.81□□□□□ -0.04
CLN6-203ENST00000563917 POLR1AO95602 1720 aaPredicted RBP14.8□□□□□ -0.04
CLN6-203ENST00000563917 ANKRD30AQ9BXX3 1397 aa14.8□□□□□ -0.04
CLN6-203ENST00000563917 ABCC5O15440 1437 aa14.8□□□□□ -0.04
CLN6-203ENST00000563917 DAPK1P53355 1430 aa14.79□□□□□ -0.04
CLN6-203ENST00000563917 DISP3Q9P2K9 1392 aa14.78□□□□□ -0.04
CLN6-203ENST00000563917 CHIC2Q9UKJ5 165 aa14.78□□□□□ -0.04
CLN6-203ENST00000563917 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.04
CLN6-203ENST00000563917 ERVK-7P63135 1459 aa14.77□□□□□ -0.04
CLN6-203ENST00000563917 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.05
CLN6-203ENST00000563917 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
CLN6-203ENST00000563917 SPATA31D1Q6ZQQ2 1576 aa14.77□□□□□ -0.05
CLN6-203ENST00000563917 CPS1P31327 1500 aa14.76□□□□□ -0.05
CLN6-203ENST00000563917 NPHP4O75161 1426 aaPredicted RBP14.76□□□□□ -0.05
CLN6-203ENST00000563917 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CLN6-203ENST00000563917 CEP152O94986 1710 aa14.76□□□□□ -0.05
CLN6-203ENST00000563917 TOM1O60784 492 aa14.76□□□□□ -0.05
CLN6-203ENST00000563917 CFAP65Q6ZU64 1925 aaKnown RBP14.74□□□□□ -0.05
CLN6-203ENST00000563917 MROH1Q8NDA8 1641 aa14.74□□□□□ -0.05
CLN6-203ENST00000563917 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
CLN6-203ENST00000563917 EID1Q9Y6B2 187 aa14.74□□□□□ -0.05
CLN6-203ENST00000563917 PRDM15P57071 1507 aaPredicted RBP14.74□□□□□ -0.05
CLN6-203ENST00000563917 ARHGAP31Q2M1Z3 1444 aa14.74□□□□□ -0.05
CLN6-203ENST00000563917 DEPDC5O75140 1603 aa14.74□□□□□ -0.05
CLN6-203ENST00000563917 MED14O60244 1454 aa14.73□□□□□ -0.05
CLN6-203ENST00000563917 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
CLN6-203ENST00000563917 IQGAP1P46940 1657 aa14.71□□□□□ -0.06
CLN6-203ENST00000563917 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
CLN6-203ENST00000563917 UBR1Q8IWV7 1749 aa14.68□□□□□ -0.06
CLN6-203ENST00000563917 SCAF11Q99590 1463 aaKnown RBP14.68□□□□□ -0.06
CLN6-203ENST00000563917 VWDEQ8N2E2 1590 aa14.67□□□□□ -0.06
CLN6-203ENST00000563917 ADGRL2O95490 1459 aa14.66□□□□□ -0.06
CLN6-203ENST00000563917 LMTK2Q8IWU2 1503 aa14.66□□□□□ -0.06
CLN6-203ENST00000563917 ANKRD50Q9ULJ7 1429 aa14.66□□□□□ -0.06
CLN6-203ENST00000563917 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
CLN6-203ENST00000563917 LTKP29376 864 aa14.64□□□□□ -0.07
CLN6-203ENST00000563917 BCANQ96GW7 911 aa14.64□□□□□ -0.07
CLN6-203ENST00000563917 SLIT1O75093 1534 aa14.64□□□□□ -0.07
CLN6-203ENST00000563917 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
CLN6-203ENST00000563917 TMEM2Q9UHN6 1383 aa14.63□□□□□ -0.07
CLN6-203ENST00000563917 IDI1Q13907 227 aa14.63□□□□□ -0.07
CLN6-203ENST00000563917 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
CLN6-203ENST00000563917 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
CLN6-203ENST00000563917 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
CLN6-203ENST00000563917 SYNMO15061 1565 aa14.61□□□□□ -0.07
CLN6-203ENST00000563917 HSPA1LP34931 641 aa14.61□□□□□ -0.07
CLN6-203ENST00000563917 RPRD2Q5VT52 1461 aaKnown RBP14.6□□□□□ -0.07
CLN6-203ENST00000563917 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
CLN6-203ENST00000563917 LRRC7Q96NW7 1537 aa14.6□□□□□ -0.07
CLN6-203ENST00000563917 PPP1R15AO75807 674 aaPredicted RBP14.59□□□□□ -0.07
CLN6-203ENST00000563917 ITGAEP38570 1179 aa14.59□□□□□ -0.07
CLN6-203ENST00000563917 NOS1P29475 1434 aa14.58□□□□□ -0.07
CLN6-203ENST00000563917 ILDR2Q71H61 639 aa14.58□□□□□ -0.08
CLN6-203ENST00000563917 SOCS7O14512 581 aa14.57□□□□□ -0.08
CLN6-203ENST00000563917 ROCK1Q13464 1354 aa14.57□□□□□ -0.08
CLN6-203ENST00000563917 ADGRB3O60242 1522 aa14.56□□□□□ -0.08
CLN6-203ENST00000563917 CHGAP10645 457 aaKnown RBP14.56□□□□□ -0.08
CLN6-203ENST00000563917 SLC26A8Q96RN1 970 aa14.56□□□□□ -0.08
CLN6-203ENST00000563917 TET3O43151 1660 aa14.55□□□□□ -0.08
CLN6-203ENST00000563917 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
CLN6-203ENST00000563917 STRCP1A6NGW2 1772 aa14.55□□□□□ -0.08
CLN6-203ENST00000563917 KCNA6P17658 529 aa14.54□□□□□ -0.08
CLN6-203ENST00000563917 PROSER2Q86WR7 435 aaPredicted RBP14.54□□□□□ -0.08
CLN6-203ENST00000563917 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
CLN6-203ENST00000563917 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms