RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 PPP6R1Q9UPN7 881 aa29.01■■■□□ 2.23
SYNGR3-203ENST00000563869 RSPH4AQ5TD94 716 aa29■■■□□ 2.23
SYNGR3-203ENST00000563869 FGD6Q6ZV73 1430 aa28.96■■■□□ 2.23
SYNGR3-203ENST00000563869 PTPN23Q9H3S7 1636 aa28.94■■■□□ 2.22
SYNGR3-203ENST00000563869 CAMSAP2Q08AD1 1489 aa28.93■■■□□ 2.22
SYNGR3-203ENST00000563869 MBD5Q9P267 1494 aa28.93■■■□□ 2.22
SYNGR3-203ENST00000563869 UBAP1LF5GYI3 381 aa28.93■■■□□ 2.22
SYNGR3-203ENST00000563869 RTEL1-TNFRSF6BF6WH68 1400 aa28.92■■■□□ 2.22
SYNGR3-203ENST00000563869 ZNF644Q9H582 1327 aaPredicted RBP28.92■■■□□ 2.22
SYNGR3-203ENST00000563869 A2ML1A8K2U0 1454 aa28.91■■■□□ 2.22
SYNGR3-203ENST00000563869 DNMT1P26358 1616 aaKnown RBP28.91■■■□□ 2.22
SYNGR3-203ENST00000563869 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
SYNGR3-203ENST00000563869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.88■■■□□ 2.21
SYNGR3-203ENST00000563869 DHX29Q7Z478 1369 aaKnown RBP28.88■■■□□ 2.21
SYNGR3-203ENST00000563869 POLR1AO95602 1720 aaPredicted RBP28.85■■■□□ 2.21
SYNGR3-203ENST00000563869 CCDC141Q6ZP82 1450 aa28.84■■■□□ 2.21
SYNGR3-203ENST00000563869 FAM135AQ9P2D6 1515 aa28.82■■■□□ 2.2
SYNGR3-203ENST00000563869 RRBP1Q9P2E9 1410 aaKnown RBP28.8■■■□□ 2.2
SYNGR3-203ENST00000563869 PPARGC1BQ86YN6 1023 aaKnown RBP28.79■■■□□ 2.2
SYNGR3-203ENST00000563869 NEURL4Q96JN8 1562 aa28.79■■■□□ 2.2
SYNGR3-203ENST00000563869 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
SYNGR3-203ENST00000563869 PZPP20742 1482 aa28.78■■■□□ 2.2
SYNGR3-203ENST00000563869 TNRQ92752 1358 aa28.78■■■□□ 2.2
SYNGR3-203ENST00000563869 TSPY4P0CV99 314 aa28.78■■■□□ 2.2
SYNGR3-203ENST00000563869 TSPY10P0CW01 314 aa28.78■■■□□ 2.2
SYNGR3-203ENST00000563869 KIF3BO15066 747 aa28.77■■■□□ 2.2
SYNGR3-203ENST00000563869 CPS1P31327 1500 aa28.76■■■□□ 2.19
SYNGR3-203ENST00000563869 FBXO31Q5XUX0 539 aaPredicted RBP28.76■■■□□ 2.19
SYNGR3-203ENST00000563869 SHANK2Q9UPX8 1470 aa28.76■■■□□ 2.19
SYNGR3-203ENST00000563869 CROCC2H7BZ55 1655 aa28.75■■■□□ 2.19
SYNGR3-203ENST00000563869 MAST1Q9Y2H9 1570 aa28.74■■■□□ 2.19
SYNGR3-203ENST00000563869 FAM50AQ14320 339 aaKnown RBP28.72■■■□□ 2.19
SYNGR3-203ENST00000563869 WASHC2CQ9Y4E1 1318 aa28.7■■■□□ 2.19
SYNGR3-203ENST00000563869 TOM1O60784 492 aa28.68■■■□□ 2.18
SYNGR3-203ENST00000563869 DAPK1P53355 1430 aa28.68■■■□□ 2.18
SYNGR3-203ENST00000563869 NLRP1Q9C000 1473 aa28.67■■■□□ 2.18
SYNGR3-203ENST00000563869 ANKLE2Q86XL3 938 aa28.67■■■□□ 2.18
SYNGR3-203ENST00000563869 THEMISQ8N1K5 641 aaPredicted RBP28.67■■■□□ 2.18
SYNGR3-203ENST00000563869 HSPA1LP34931 641 aa28.66■■■□□ 2.18
SYNGR3-203ENST00000563869 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
SYNGR3-203ENST00000563869 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
SYNGR3-203ENST00000563869 DEPDC5O75140 1603 aa28.65■■■□□ 2.18
SYNGR3-203ENST00000563869 VWDEQ8N2E2 1590 aa28.65■■■□□ 2.18
SYNGR3-203ENST00000563869 PIP4K2BP78356 416 aa28.64■■■□□ 2.18
SYNGR3-203ENST00000563869 MED14O60244 1454 aa28.64■■■□□ 2.17
SYNGR3-203ENST00000563869 MED1Q15648 1581 aaPredicted RBP28.62■■■□□ 2.17
SYNGR3-203ENST00000563869 ABCC5O15440 1437 aa28.62■■■□□ 2.17
SYNGR3-203ENST00000563869 NPHP4O75161 1426 aaPredicted RBP28.6■■■□□ 2.17
SYNGR3-203ENST00000563869 RNF17Q9BXT8 1623 aaKnown RBP28.59■■■□□ 2.17
SYNGR3-203ENST00000563869 ZC3H13Q5T200 1668 aaKnown RBP28.58■■■□□ 2.17
SYNGR3-203ENST00000563869 ANKRD30AQ9BXX3 1397 aa28.58■■■□□ 2.17
SYNGR3-203ENST00000563869 IQGAP1P46940 1657 aa28.58■■■□□ 2.16
SYNGR3-203ENST00000563869 ADGRL2O95490 1459 aa28.56■■■□□ 2.16
SYNGR3-203ENST00000563869 ROCK1Q13464 1354 aa28.55■■■□□ 2.16
SYNGR3-203ENST00000563869 ALKQ9UM73 1620 aa28.54■■■□□ 2.16
SYNGR3-203ENST00000563869 ABCC3O15438 1527 aa28.53■■■□□ 2.16
SYNGR3-203ENST00000563869 EIF2AK4Q9P2K8 1649 aaKnown RBP28.53■■■□□ 2.16
SYNGR3-203ENST00000563869 DUOX2Q9NRD8 1548 aa28.51■■■□□ 2.15
SYNGR3-203ENST00000563869 STRCP1A6NGW2 1772 aa28.5■■■□□ 2.15
SYNGR3-203ENST00000563869 ERVK-7P63135 1459 aa28.47■■■□□ 2.15
SYNGR3-203ENST00000563869 SYNMO15061 1565 aa28.46■■■□□ 2.15
SYNGR3-203ENST00000563869 MROH1Q8NDA8 1641 aa28.46■■■□□ 2.15
SYNGR3-203ENST00000563869 LRRC7Q96NW7 1537 aa28.45■■■□□ 2.15
SYNGR3-203ENST00000563869 KIF15Q9NS87 1388 aa28.45■■■□□ 2.14
SYNGR3-203ENST00000563869 ACIN1Q9UKV3 1341 aaKnown RBP28.44■■■□□ 2.14
SYNGR3-203ENST00000563869 ERBINQ96RT1 1412 aa28.44■■■□□ 2.14
SYNGR3-203ENST00000563869 CEP152O94986 1710 aa28.44■■■□□ 2.14
SYNGR3-203ENST00000563869 UBR1Q8IWV7 1749 aa28.44■■■□□ 2.14
SYNGR3-203ENST00000563869 CFAP65Q6ZU64 1925 aaKnown RBP28.41■■■□□ 2.14
SYNGR3-203ENST00000563869 ITGAEP38570 1179 aa28.39■■■□□ 2.14
SYNGR3-203ENST00000563869 PHF23Q9BUL5 403 aaPredicted RBP28.38■■■□□ 2.13
SYNGR3-203ENST00000563869 CHIC2Q9UKJ5 165 aa28.38■■■□□ 2.13
SYNGR3-203ENST00000563869 GCC2Q8IWJ2 1684 aa28.37■■■□□ 2.13
SYNGR3-203ENST00000563869 SCAF11Q99590 1463 aaKnown RBP28.36■■■□□ 2.13
SYNGR3-203ENST00000563869 RRP7BPQ9NSQ0 103 aa28.35■■■□□ 2.13
SYNGR3-203ENST00000563869 ARHGAP23Q9P227 1491 aa28.34■■■□□ 2.13
SYNGR3-203ENST00000563869 SLIT1O75093 1534 aa28.33■■■□□ 2.13
SYNGR3-203ENST00000563869 HFM1A2PYH4 1435 aa28.33■■■□□ 2.13
SYNGR3-203ENST00000563869 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
SYNGR3-203ENST00000563869 TRIM26Q12899 539 aaPredicted RBP28.32■■■□□ 2.12
SYNGR3-203ENST00000563869 ARHGAP31Q2M1Z3 1444 aa28.31■■■□□ 2.12
SYNGR3-203ENST00000563869 PRDM15P57071 1507 aaPredicted RBP28.31■■■□□ 2.12
SYNGR3-203ENST00000563869 LTKP29376 864 aa28.29■■■□□ 2.12
SYNGR3-203ENST00000563869 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
SYNGR3-203ENST00000563869 TXNDC2Q86VQ3 553 aa28.28■■■□□ 2.12
SYNGR3-203ENST00000563869 SENP3Q9H4L4 574 aaPredicted RBP28.28■■■□□ 2.12
SYNGR3-203ENST00000563869 PIK3C2BO00750 1634 aa28.24■■■□□ 2.11
SYNGR3-203ENST00000563869 NAIPQ13075 1403 aa28.24■■■□□ 2.11
SYNGR3-203ENST00000563869 KANK1Q14678 1352 aa28.24■■■□□ 2.11
SYNGR3-203ENST00000563869 EID1Q9Y6B2 187 aa28.23■■■□□ 2.11
SYNGR3-203ENST00000563869 KDM5AP29375 1690 aaKnown RBP28.2■■■□□ 2.11
SYNGR3-203ENST00000563869 UNC13BO14795 1591 aa28.19■■■□□ 2.1
SYNGR3-203ENST00000563869 TMEM2Q9UHN6 1383 aa28.18■■■□□ 2.1
SYNGR3-203ENST00000563869 SETD5Q9C0A6 1442 aa28.16■■■□□ 2.1
SYNGR3-203ENST00000563869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.15■■■□□ 2.1
SYNGR3-203ENST00000563869 FAM135BQ49AJ0 1406 aa28.14■■■□□ 2.1
SYNGR3-203ENST00000563869 EFCAB6Q5THR3 1501 aa28.13■■■□□ 2.09
SYNGR3-203ENST00000563869 HRCP23327 699 aa28.13■■■□□ 2.09
SYNGR3-203ENST00000563869 STAG3Q9UJ98 1225 aa28.13■■■□□ 2.09
SYNGR3-203ENST00000563869 LMTK2Q8IWU2 1503 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms