RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
SCAMP2-204ENST00000563829 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
SCAMP2-204ENST00000563829 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
SCAMP2-204ENST00000563829 ESPNB1AK53 854 aa15.85■□□□□ 0.13
SCAMP2-204ENST00000563829 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
SCAMP2-204ENST00000563829 MBD5Q9P267 1494 aa15.85■□□□□ 0.13
SCAMP2-204ENST00000563829 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
SCAMP2-204ENST00000563829 IGHDP01880 384 aa15.84■□□□□ 0.13
SCAMP2-204ENST00000563829 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
SCAMP2-204ENST00000563829 CTTNBP2Q8WZ74 1663 aa15.84■□□□□ 0.13
SCAMP2-204ENST00000563829 ERBB4Q15303 1308 aa15.84■□□□□ 0.13
SCAMP2-204ENST00000563829 DUSP27Q5VZP5 1158 aa15.84■□□□□ 0.13
SCAMP2-204ENST00000563829 MCM4P33991 863 aa15.83■□□□□ 0.13
SCAMP2-204ENST00000563829 TBC1D2Q9BYX2 928 aa15.83■□□□□ 0.12
SCAMP2-204ENST00000563829 KIF14Q15058 1648 aa15.82■□□□□ 0.12
SCAMP2-204ENST00000563829 TRAK2O60296 914 aa15.82■□□□□ 0.12
SCAMP2-204ENST00000563829 MRE11P49959 708 aa15.82■□□□□ 0.12
SCAMP2-204ENST00000563829 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
SCAMP2-204ENST00000563829 TRIM44Q96DX7 344 aaPredicted RBP15.82■□□□□ 0.12
SCAMP2-204ENST00000563829 DAPK1P53355 1430 aa15.82■□□□□ 0.12
SCAMP2-204ENST00000563829 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
SCAMP2-204ENST00000563829 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
SCAMP2-204ENST00000563829 BLMP54132 1417 aaPredicted RBP15.81■□□□□ 0.12
SCAMP2-204ENST00000563829 PER1O15534 1290 aaPredicted RBP15.8■□□□□ 0.12
SCAMP2-204ENST00000563829 GRPEL1Q9HAV7 217 aa15.8■□□□□ 0.12
SCAMP2-204ENST00000563829 PZPP20742 1482 aa15.79■□□□□ 0.12
SCAMP2-204ENST00000563829 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
SCAMP2-204ENST00000563829 BCAR3O75815 825 aa15.79■□□□□ 0.12
SCAMP2-204ENST00000563829 PDCL3Q9H2J4 239 aa15.79■□□□□ 0.12
SCAMP2-204ENST00000563829 ROCK1Q13464 1354 aa15.79■□□□□ 0.12
SCAMP2-204ENST00000563829 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
SCAMP2-204ENST00000563829 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
SCAMP2-204ENST00000563829 ABCC5O15440 1437 aa15.78■□□□□ 0.12
SCAMP2-204ENST00000563829 ZMYM4Q5VZL5 1548 aa15.78■□□□□ 0.12
SCAMP2-204ENST00000563829 KIAA1107Q9UPP5 1409 aa15.78■□□□□ 0.12
SCAMP2-204ENST00000563829 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
SCAMP2-204ENST00000563829 WDR43Q15061 677 aaKnown RBP eCLIP15.77■□□□□ 0.11
SCAMP2-204ENST00000563829 PANK3Q9H999 370 aa15.76■□□□□ 0.11
SCAMP2-204ENST00000563829 TPM2P07951 284 aa15.75■□□□□ 0.11
SCAMP2-204ENST00000563829 KIAA1211Q6ZU35 1233 aa15.75■□□□□ 0.11
SCAMP2-204ENST00000563829 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
SCAMP2-204ENST00000563829 RBM10P98175 930 aaKnown RBP15.75■□□□□ 0.11
SCAMP2-204ENST00000563829 CDK13Q14004 1512 aaKnown RBP15.74■□□□□ 0.11
SCAMP2-204ENST00000563829 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
SCAMP2-204ENST00000563829 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
SCAMP2-204ENST00000563829 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
SCAMP2-204ENST00000563829 TBC1D32Q96NH3 1257 aa15.74■□□□□ 0.11
SCAMP2-204ENST00000563829 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
SCAMP2-204ENST00000563829 COG6Q9Y2V7 657 aa15.73■□□□□ 0.11
SCAMP2-204ENST00000563829 UHRF1BP1Q6BDS2 1440 aa15.72■□□□□ 0.11
SCAMP2-204ENST00000563829 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
SCAMP2-204ENST00000563829 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
SCAMP2-204ENST00000563829 E9PCH4 1651 aa15.71■□□□□ 0.11
SCAMP2-204ENST00000563829 EIF3AQ14152 1382 aaKnown RBP15.71■□□□□ 0.11
SCAMP2-204ENST00000563829 CHMP5Q9NZZ3 219 aa15.71■□□□□ 0.11
SCAMP2-204ENST00000563829 SLFN5Q08AF3 891 aa15.71■□□□□ 0.11
SCAMP2-204ENST00000563829 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
SCAMP2-204ENST00000563829 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
SCAMP2-204ENST00000563829 EPRSP07814 1512 aaKnown RBP15.71■□□□□ 0.1
SCAMP2-204ENST00000563829 CUL7Q14999 1698 aa15.71■□□□□ 0.1
SCAMP2-204ENST00000563829 PANK1Q8TE04 598 aa15.71■□□□□ 0.1
SCAMP2-204ENST00000563829 ARID3AQ99856 593 aa15.7■□□□□ 0.1
SCAMP2-204ENST00000563829 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
SCAMP2-204ENST00000563829 CLUAP1Q96AJ1 413 aa15.7■□□□□ 0.1
SCAMP2-204ENST00000563829 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
SCAMP2-204ENST00000563829 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
SCAMP2-204ENST00000563829 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
SCAMP2-204ENST00000563829 NBPF1Q3BBV0 1214 aa15.69■□□□□ 0.1
SCAMP2-204ENST00000563829 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
SCAMP2-204ENST00000563829 GAS2L3Q86XJ1 694 aa15.68■□□□□ 0.1
SCAMP2-204ENST00000563829 FAM13BQ9NYF5 915 aa15.68■□□□□ 0.1
SCAMP2-204ENST00000563829 PRDM4Q9UKN5 801 aa15.68■□□□□ 0.1
SCAMP2-204ENST00000563829 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
SCAMP2-204ENST00000563829 INSRP06213 1382 aa15.67■□□□□ 0.1
SCAMP2-204ENST00000563829 ZNF521Q96K83 1311 aa15.67■□□□□ 0.1
SCAMP2-204ENST00000563829 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
SCAMP2-204ENST00000563829 RGL3Q3MIN7 710 aa15.67■□□□□ 0.1
SCAMP2-204ENST00000563829 DNMT1P26358 1616 aaKnown RBP15.66■□□□□ 0.1
SCAMP2-204ENST00000563829 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
SCAMP2-204ENST00000563829 DDX11L8A8MPP1 907 aa15.66■□□□□ 0.1
SCAMP2-204ENST00000563829 TDRD9Q8NDG6 1382 aaKnown RBP15.66■□□□□ 0.1
SCAMP2-204ENST00000563829 CGNL1Q0VF96 1302 aa15.66■□□□□ 0.1
SCAMP2-204ENST00000563829 NESP48681 1621 aa15.66■□□□□ 0.1
SCAMP2-204ENST00000563829 NUP155O75694 1391 aa15.65■□□□□ 0.1
SCAMP2-204ENST00000563829 MFAP1P55081 439 aaKnown RBP15.65■□□□□ 0.1
SCAMP2-204ENST00000563829 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
SCAMP2-204ENST00000563829 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
SCAMP2-204ENST00000563829 APAF1O14727 1248 aa15.65■□□□□ 0.1
SCAMP2-204ENST00000563829 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
SCAMP2-204ENST00000563829 PDZRN3Q9UPQ7 1066 aa15.63■□□□□ 0.09
SCAMP2-204ENST00000563829 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
SCAMP2-204ENST00000563829 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
SCAMP2-204ENST00000563829 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
SCAMP2-204ENST00000563829 RIPK4P57078 832 aa15.62■□□□□ 0.09
SCAMP2-204ENST00000563829 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
SCAMP2-204ENST00000563829 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
SCAMP2-204ENST00000563829 MSNP26038 577 aaKnown RBP15.61■□□□□ 0.09
SCAMP2-204ENST00000563829 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
SCAMP2-204ENST00000563829 R3HCC1Q9Y3T6 440 aaKnown RBP15.61■□□□□ 0.09
SCAMP2-204ENST00000563829 DMRT2Q9Y5R5 561 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms