RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 ARHGEF5Q12774 1597 aa27.5■■□□□ 1.99
MAP1LC3B-204ENST00000563720 ZNF142P52746 1687 aaPredicted RBP27.49■■□□□ 1.99
MAP1LC3B-204ENST00000563720 CEP170BQ9Y4F5 1589 aaPredicted RBP27.49■■□□□ 1.99
MAP1LC3B-204ENST00000563720 TCOF1Q13428 1488 aaKnown RBP27.47■■□□□ 1.99
MAP1LC3B-204ENST00000563720 PPP6R1Q9UPN7 881 aa27.47■■□□□ 1.99
MAP1LC3B-204ENST00000563720 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
MAP1LC3B-204ENST00000563720 MYOM3Q5VTT5 1437 aa27.42■■□□□ 1.98
MAP1LC3B-204ENST00000563720 MIA2Q96PC5 1412 aa27.4■■□□□ 1.98
MAP1LC3B-204ENST00000563720 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
MAP1LC3B-204ENST00000563720 DHX29Q7Z478 1369 aaKnown RBP27.37■■□□□ 1.97
MAP1LC3B-204ENST00000563720 MAST1Q9Y2H9 1570 aa27.37■■□□□ 1.97
MAP1LC3B-204ENST00000563720 APLP2Q06481 763 aa27.36■■□□□ 1.97
MAP1LC3B-204ENST00000563720 SCAF1Q9H7N4 1312 aaKnown RBP27.36■■□□□ 1.97
MAP1LC3B-204ENST00000563720 DNMT1P26358 1616 aaKnown RBP27.34■■□□□ 1.97
MAP1LC3B-204ENST00000563720 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
MAP1LC3B-204ENST00000563720 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
MAP1LC3B-204ENST00000563720 PIP4K2BP78356 416 aa27.31■■□□□ 1.96
MAP1LC3B-204ENST00000563720 TNRQ92752 1358 aa27.31■■□□□ 1.96
MAP1LC3B-204ENST00000563720 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
MAP1LC3B-204ENST00000563720 KIF3BO15066 747 aa27.3■■□□□ 1.96
MAP1LC3B-204ENST00000563720 FBXO31Q5XUX0 539 aaPredicted RBP27.3■■□□□ 1.96
MAP1LC3B-204ENST00000563720 TOM1O60784 492 aa27.29■■□□□ 1.96
MAP1LC3B-204ENST00000563720 CROCC2H7BZ55 1655 aa27.29■■□□□ 1.96
MAP1LC3B-204ENST00000563720 HSPA1LP34931 641 aa27.28■■□□□ 1.96
MAP1LC3B-204ENST00000563720 CPS1P31327 1500 aa27.26■■□□□ 1.95
MAP1LC3B-204ENST00000563720 WASHC2CQ9Y4E1 1318 aa27.24■■□□□ 1.95
MAP1LC3B-204ENST00000563720 ANKLE2Q86XL3 938 aa27.24■■□□□ 1.95
MAP1LC3B-204ENST00000563720 SHANK2Q9UPX8 1470 aa27.24■■□□□ 1.95
MAP1LC3B-204ENST00000563720 FAM135AQ9P2D6 1515 aa27.23■■□□□ 1.95
MAP1LC3B-204ENST00000563720 POLR1AO95602 1720 aaPredicted RBP27.23■■□□□ 1.95
MAP1LC3B-204ENST00000563720 PZPP20742 1482 aa27.23■■□□□ 1.95
MAP1LC3B-204ENST00000563720 KDM5DQ9BY66 1539 aa27.22■■□□□ 1.95
MAP1LC3B-204ENST00000563720 RNF17Q9BXT8 1623 aaKnown RBP27.22■■□□□ 1.95
MAP1LC3B-204ENST00000563720 EIF2AK4Q9P2K8 1649 aaKnown RBP27.22■■□□□ 1.95
MAP1LC3B-204ENST00000563720 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
MAP1LC3B-204ENST00000563720 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
MAP1LC3B-204ENST00000563720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.21■■□□□ 1.95
MAP1LC3B-204ENST00000563720 THEMISQ8N1K5 641 aaPredicted RBP27.2■■□□□ 1.94
MAP1LC3B-204ENST00000563720 ABCC5O15440 1437 aa27.18■■□□□ 1.94
MAP1LC3B-204ENST00000563720 MED1Q15648 1581 aaPredicted RBP27.18■■□□□ 1.94
MAP1LC3B-204ENST00000563720 DUOX2Q9NRD8 1548 aa27.15■■□□□ 1.94
MAP1LC3B-204ENST00000563720 NLRP1Q9C000 1473 aa27.14■■□□□ 1.94
MAP1LC3B-204ENST00000563720 MROH1Q8NDA8 1641 aa27.14■■□□□ 1.94
MAP1LC3B-204ENST00000563720 DAPK1P53355 1430 aa27.14■■□□□ 1.93
MAP1LC3B-204ENST00000563720 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.93
MAP1LC3B-204ENST00000563720 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.93
MAP1LC3B-204ENST00000563720 NPHP4O75161 1426 aaPredicted RBP27.13■■□□□ 1.93
MAP1LC3B-204ENST00000563720 VWDEQ8N2E2 1590 aa27.11■■□□□ 1.93
MAP1LC3B-204ENST00000563720 PHF23Q9BUL5 403 aaPredicted RBP27.1■■□□□ 1.93
MAP1LC3B-204ENST00000563720 CEP152O94986 1710 aa27.1■■□□□ 1.93
MAP1LC3B-204ENST00000563720 MED14O60244 1454 aa27.09■■□□□ 1.93
MAP1LC3B-204ENST00000563720 ABCC3O15438 1527 aa27.09■■□□□ 1.93
MAP1LC3B-204ENST00000563720 KIF15Q9NS87 1388 aa27.08■■□□□ 1.93
MAP1LC3B-204ENST00000563720 DEPDC5O75140 1603 aa27.07■■□□□ 1.92
MAP1LC3B-204ENST00000563720 ERBINQ96RT1 1412 aa27.04■■□□□ 1.92
MAP1LC3B-204ENST00000563720 CFAP65Q6ZU64 1925 aaKnown RBP27.04■■□□□ 1.92
MAP1LC3B-204ENST00000563720 SENP3Q9H4L4 574 aaPredicted RBP27.03■■□□□ 1.92
MAP1LC3B-204ENST00000563720 RRP7BPQ9NSQ0 103 aa27.02■■□□□ 1.92
MAP1LC3B-204ENST00000563720 IQGAP1P46940 1657 aa27.01■■□□□ 1.92
MAP1LC3B-204ENST00000563720 PRDM15P57071 1507 aaPredicted RBP27.01■■□□□ 1.91
MAP1LC3B-204ENST00000563720 ALKQ9UM73 1620 aa27■■□□□ 1.91
MAP1LC3B-204ENST00000563720 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
MAP1LC3B-204ENST00000563720 LRRC7Q96NW7 1537 aa26.97■■□□□ 1.91
MAP1LC3B-204ENST00000563720 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
MAP1LC3B-204ENST00000563720 ADGRL2O95490 1459 aa26.97■■□□□ 1.91
MAP1LC3B-204ENST00000563720 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.9
MAP1LC3B-204ENST00000563720 ERVK-7P63135 1459 aa26.94■■□□□ 1.9
MAP1LC3B-204ENST00000563720 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
MAP1LC3B-204ENST00000563720 SYNMO15061 1565 aa26.91■■□□□ 1.9
MAP1LC3B-204ENST00000563720 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
MAP1LC3B-204ENST00000563720 ARHGAP31Q2M1Z3 1444 aa26.87■■□□□ 1.89
MAP1LC3B-204ENST00000563720 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
MAP1LC3B-204ENST00000563720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.85■■□□□ 1.89
MAP1LC3B-204ENST00000563720 UBR1Q8IWV7 1749 aa26.84■■□□□ 1.89
MAP1LC3B-204ENST00000563720 LMTK2Q8IWU2 1503 aa26.84■■□□□ 1.89
MAP1LC3B-204ENST00000563720 LTKP29376 864 aa26.83■■□□□ 1.89
MAP1LC3B-204ENST00000563720 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
MAP1LC3B-204ENST00000563720 KANK1Q14678 1352 aa26.83■■□□□ 1.88
MAP1LC3B-204ENST00000563720 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
MAP1LC3B-204ENST00000563720 ANKRD50Q9ULJ7 1429 aa26.8■■□□□ 1.88
MAP1LC3B-204ENST00000563720 ARHGAP23Q9P227 1491 aa26.78■■□□□ 1.88
MAP1LC3B-204ENST00000563720 SLIT1O75093 1534 aa26.78■■□□□ 1.88
MAP1LC3B-204ENST00000563720 EFCAB6Q5THR3 1501 aa26.77■■□□□ 1.88
MAP1LC3B-204ENST00000563720 STAG3Q9UJ98 1225 aa26.75■■□□□ 1.87
MAP1LC3B-204ENST00000563720 PIK3C2BO00750 1634 aa26.75■■□□□ 1.87
MAP1LC3B-204ENST00000563720 UNC13BO14795 1591 aa26.75■■□□□ 1.87
MAP1LC3B-204ENST00000563720 RGS17Q9UGC6 210 aaPredicted RBP26.74■■□□□ 1.87
MAP1LC3B-204ENST00000563720 ROCK1Q13464 1354 aa26.73■■□□□ 1.87
MAP1LC3B-204ENST00000563720 TET3O43151 1660 aa26.72■■□□□ 1.87
MAP1LC3B-204ENST00000563720 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.87
MAP1LC3B-204ENST00000563720 GCC2Q8IWJ2 1684 aa26.7■■□□□ 1.87
MAP1LC3B-204ENST00000563720 TMEM2Q9UHN6 1383 aa26.7■■□□□ 1.86
MAP1LC3B-204ENST00000563720 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
MAP1LC3B-204ENST00000563720 XIRP1Q702N8 1843 aaKnown RBP26.68■■□□□ 1.86
MAP1LC3B-204ENST00000563720 NOS1P29475 1434 aa26.66■■□□□ 1.86
MAP1LC3B-204ENST00000563720 TMEM94Q12767 1356 aa26.66■■□□□ 1.86
MAP1LC3B-204ENST00000563720 ITGAEP38570 1179 aa26.65■■□□□ 1.86
MAP1LC3B-204ENST00000563720 RPRD2Q5VT52 1461 aaKnown RBP26.64■■□□□ 1.86
MAP1LC3B-204ENST00000563720 IQGAP3Q86VI3 1631 aa26.64■■□□□ 1.85
MAP1LC3B-204ENST00000563720 RRBP1Q9P2E9 1410 aaKnown RBP26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms