RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
PDXDC1-210ENST00000563679 E9PCH4 1651 aa13.78□□□□□ -0.2
PDXDC1-210ENST00000563679 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
PDXDC1-210ENST00000563679 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.2
PDXDC1-210ENST00000563679 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
PDXDC1-210ENST00000563679 ZFYVE16Q7Z3T8 1539 aa13.76□□□□□ -0.21
PDXDC1-210ENST00000563679 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-210ENST00000563679 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
PDXDC1-210ENST00000563679 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
PDXDC1-210ENST00000563679 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-210ENST00000563679 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
PDXDC1-210ENST00000563679 WDR7Q9Y4E6 1490 aa13.74□□□□□ -0.21
PDXDC1-210ENST00000563679 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
PDXDC1-210ENST00000563679 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
PDXDC1-210ENST00000563679 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
PDXDC1-210ENST00000563679 A2MP01023 1474 aa13.73□□□□□ -0.21
PDXDC1-210ENST00000563679 TRAPPC8Q9Y2L5 1435 aa13.72□□□□□ -0.21
PDXDC1-210ENST00000563679 VWDEQ8N2E2 1590 aa13.72□□□□□ -0.21
PDXDC1-210ENST00000563679 PRDM15P57071 1507 aaPredicted RBP13.72□□□□□ -0.21
PDXDC1-210ENST00000563679 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
PDXDC1-210ENST00000563679 TET3O43151 1660 aa13.69□□□□□ -0.22
PDXDC1-210ENST00000563679 TRPM2O94759 1503 aa13.69□□□□□ -0.22
PDXDC1-210ENST00000563679 CEP152O94986 1710 aa13.68□□□□□ -0.22
PDXDC1-210ENST00000563679 SPHKAPQ2M3C7 1700 aa13.68□□□□□ -0.22
PDXDC1-210ENST00000563679 PTPRTO14522 1441 aa13.67□□□□□ -0.22
PDXDC1-210ENST00000563679 ATP7AQ04656 1500 aa13.67□□□□□ -0.22
PDXDC1-210ENST00000563679 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
PDXDC1-210ENST00000563679 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
PDXDC1-210ENST00000563679 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
PDXDC1-210ENST00000563679 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-210ENST00000563679 DCAF11Q8TEB1 546 aa13.65□□□□□ -0.22
PDXDC1-210ENST00000563679 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
PDXDC1-210ENST00000563679 FANCAO15360 1455 aa13.65□□□□□ -0.22
PDXDC1-210ENST00000563679 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDXDC1-210ENST00000563679 MROH1Q8NDA8 1641 aa13.65□□□□□ -0.23
PDXDC1-210ENST00000563679 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
PDXDC1-210ENST00000563679 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
PDXDC1-210ENST00000563679 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
PDXDC1-210ENST00000563679 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
PDXDC1-210ENST00000563679 FKBP8Q14318 412 aa13.63□□□□□ -0.23
PDXDC1-210ENST00000563679 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-210ENST00000563679 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
PDXDC1-210ENST00000563679 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-210ENST00000563679 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
PDXDC1-210ENST00000563679 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
PDXDC1-210ENST00000563679 CLTCL1P53675 1640 aa13.62□□□□□ -0.23
PDXDC1-210ENST00000563679 NEFLP07196 543 aa13.61□□□□□ -0.23
PDXDC1-210ENST00000563679 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
PDXDC1-210ENST00000563679 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
PDXDC1-210ENST00000563679 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
PDXDC1-210ENST00000563679 ERICH6BQ5W0A0 696 aa13.6□□□□□ -0.23
PDXDC1-210ENST00000563679 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
PDXDC1-210ENST00000563679 LMTK2Q8IWU2 1503 aa13.6□□□□□ -0.23
PDXDC1-210ENST00000563679 ADGRL1O94910 1474 aa13.6□□□□□ -0.23
PDXDC1-210ENST00000563679 SCAPERQ9BY12 1400 aa13.58□□□□□ -0.24
PDXDC1-210ENST00000563679 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
PDXDC1-210ENST00000563679 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-210ENST00000563679 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-210ENST00000563679 IFT172Q9UG01 1749 aa13.57□□□□□ -0.24
PDXDC1-210ENST00000563679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.244e-7■■□□□ 12.8
PDXDC1-210ENST00000563679 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
PDXDC1-210ENST00000563679 ZMYM4Q5VZL5 1548 aa13.56□□□□□ -0.24
PDXDC1-210ENST00000563679 TESK2Q96S53 571 aa13.56□□□□□ -0.24
PDXDC1-210ENST00000563679 RALBP1Q15311 655 aa13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 AFAP1Q8N556 730 aa13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 WASHC2CQ9Y4E1 1318 aa13.55□□□□□ -0.24
PDXDC1-210ENST00000563679 INSRP06213 1382 aa13.54□□□□□ -0.24
PDXDC1-210ENST00000563679 MYOM2P54296 1465 aa13.54□□□□□ -0.24
PDXDC1-210ENST00000563679 NBPF1Q3BBV0 1214 aa13.54□□□□□ -0.24
PDXDC1-210ENST00000563679 KANK1Q14678 1352 aa13.53□□□□□ -0.24
PDXDC1-210ENST00000563679 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-210ENST00000563679 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-210ENST00000563679 MYBBP1AQ9BQG0 1328 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-210ENST00000563679 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
PDXDC1-210ENST00000563679 MLH3Q9UHC1 1453 aa13.52□□□□□ -0.25
PDXDC1-210ENST00000563679 DISP3Q9P2K9 1392 aa13.52□□□□□ -0.25
PDXDC1-210ENST00000563679 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-210ENST00000563679 FRMPD1Q5SYB0 1578 aa13.51□□□□□ -0.25
PDXDC1-210ENST00000563679 KIF1BO60333 1816 aa13.51□□□□□ -0.25
PDXDC1-210ENST00000563679 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
PDXDC1-210ENST00000563679 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
PDXDC1-210ENST00000563679 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
PDXDC1-210ENST00000563679 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
PDXDC1-210ENST00000563679 SCAF11Q99590 1463 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-210ENST00000563679 SYNMO15061 1565 aa13.5□□□□□ -0.25
PDXDC1-210ENST00000563679 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
PDXDC1-210ENST00000563679 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
PDXDC1-210ENST00000563679 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
PDXDC1-210ENST00000563679 BCANQ96GW7 911 aa13.48□□□□□ -0.25
PDXDC1-210ENST00000563679 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
PDXDC1-210ENST00000563679 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
PDXDC1-210ENST00000563679 MYOM1P52179 1685 aa13.48□□□□□ -0.25
PDXDC1-210ENST00000563679 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
PDXDC1-210ENST00000563679 NEO1Q92859 1461 aa13.47□□□□□ -0.25
PDXDC1-210ENST00000563679 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
PDXDC1-210ENST00000563679 TMF1P82094 1093 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms