RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
SMPD3-205ENST00000563455 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
SMPD3-205ENST00000563455 CCDC141Q6ZP82 1450 aa20.18■□□□□ 0.82
SMPD3-205ENST00000563455 CERKQ8TCT0 537 aa20.18■□□□□ 0.82
SMPD3-205ENST00000563455 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
SMPD3-205ENST00000563455 MBD5Q9P267 1494 aa20.18■□□□□ 0.82
SMPD3-205ENST00000563455 SAMD9LQ8IVG5 1584 aa20.16■□□□□ 0.82
SMPD3-205ENST00000563455 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
SMPD3-205ENST00000563455 ADGBQ8N7X0 1667 aa20.15■□□□□ 0.82
SMPD3-205ENST00000563455 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
SMPD3-205ENST00000563455 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
SMPD3-205ENST00000563455 PREX1Q8TCU6 1659 aa20.13■□□□□ 0.81
SMPD3-205ENST00000563455 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
SMPD3-205ENST00000563455 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
SMPD3-205ENST00000563455 GGT6Q6P531 493 aa20.12■□□□□ 0.81
SMPD3-205ENST00000563455 KIDINS220Q9ULH0 1771 aa20.11■□□□□ 0.81
SMPD3-205ENST00000563455 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
SMPD3-205ENST00000563455 A2MP01023 1474 aa20.11■□□□□ 0.81
SMPD3-205ENST00000563455 NPATQ14207 1427 aa20.1■□□□□ 0.81
SMPD3-205ENST00000563455 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
SMPD3-205ENST00000563455 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
SMPD3-205ENST00000563455 ANKRD50Q9ULJ7 1429 aa20.09■□□□□ 0.81
SMPD3-205ENST00000563455 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
SMPD3-205ENST00000563455 PTPRTO14522 1441 aa20.06■□□□□ 0.8
SMPD3-205ENST00000563455 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
SMPD3-205ENST00000563455 DHX29Q7Z478 1369 aaKnown RBP20.04■□□□□ 0.8
SMPD3-205ENST00000563455 KIF15Q9NS87 1388 aa20.04■□□□□ 0.8
SMPD3-205ENST00000563455 C3P01024 1663 aa20.02■□□□□ 0.8
SMPD3-205ENST00000563455 PLXNC1O60486 1568 aa20■□□□□ 0.79
SMPD3-205ENST00000563455 PKD2Q13563 968 aa20■□□□□ 0.79
SMPD3-205ENST00000563455 INO80Q9ULG1 1556 aaPredicted RBP20■□□□□ 0.79
SMPD3-205ENST00000563455 KIF3BO15066 747 aa19.99■□□□□ 0.79
SMPD3-205ENST00000563455 MROH2AA6NES4 1674 aa19.98■□□□□ 0.79
SMPD3-205ENST00000563455 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
SMPD3-205ENST00000563455 ERBINQ96RT1 1412 aa19.97■□□□□ 0.79
SMPD3-205ENST00000563455 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
SMPD3-205ENST00000563455 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
SMPD3-205ENST00000563455 KDM5DQ9BY66 1539 aa19.96■□□□□ 0.79
SMPD3-205ENST00000563455 TONSLQ96HA7 1378 aa19.95■□□□□ 0.78
SMPD3-205ENST00000563455 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
SMPD3-205ENST00000563455 STRCQ7RTU9 1775 aa19.92■□□□□ 0.78
SMPD3-205ENST00000563455 NUP155O75694 1391 aa19.91■□□□□ 0.78
SMPD3-205ENST00000563455 NCKAP5LQ9HCH0 1330 aa19.9■□□□□ 0.78
SMPD3-205ENST00000563455 ANKRD30BQ9BXX2 1392 aa19.9■□□□□ 0.78
SMPD3-205ENST00000563455 PLA2R1Q13018 1463 aa19.89■□□□□ 0.77
SMPD3-205ENST00000563455 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
SMPD3-205ENST00000563455 CAMSAP1Q5T5Y3 1602 aa19.89■□□□□ 0.77
SMPD3-205ENST00000563455 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
SMPD3-205ENST00000563455 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
SMPD3-205ENST00000563455 PZPP20742 1482 aa19.88■□□□□ 0.77
SMPD3-205ENST00000563455 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
SMPD3-205ENST00000563455 SIN3AQ96ST3 1273 aa19.88■□□□□ 0.77
SMPD3-205ENST00000563455 THEMISQ8N1K5 641 aaPredicted RBP19.87■□□□□ 0.77
SMPD3-205ENST00000563455 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
SMPD3-205ENST00000563455 TNRQ92752 1358 aa19.85■□□□□ 0.77
SMPD3-205ENST00000563455 FBXO31Q5XUX0 539 aaPredicted RBP19.84■□□□□ 0.77
SMPD3-205ENST00000563455 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
SMPD3-205ENST00000563455 ANKLE2Q86XL3 938 aa19.83■□□□□ 0.77
SMPD3-205ENST00000563455 RPRD2Q5VT52 1461 aaKnown RBP19.83■□□□□ 0.76
SMPD3-205ENST00000563455 CEP170BQ9Y4F5 1589 aaPredicted RBP19.83■□□□□ 0.76
SMPD3-205ENST00000563455 UNC13BO14795 1591 aa19.82■□□□□ 0.76
SMPD3-205ENST00000563455 KANK1Q14678 1352 aa19.79■□□□□ 0.76
SMPD3-205ENST00000563455 LTBP4Q8N2S1 1624 aa19.79■□□□□ 0.76
SMPD3-205ENST00000563455 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
SMPD3-205ENST00000563455 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
SMPD3-205ENST00000563455 NLRP1Q9C000 1473 aa19.77■□□□□ 0.76
SMPD3-205ENST00000563455 ZNF142P52746 1687 aaPredicted RBP19.77■□□□□ 0.76
SMPD3-205ENST00000563455 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
SMPD3-205ENST00000563455 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
SMPD3-205ENST00000563455 IQGAP3Q86VI3 1631 aa19.74■□□□□ 0.75
SMPD3-205ENST00000563455 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
SMPD3-205ENST00000563455 TOM1O60784 492 aa19.7■□□□□ 0.74
SMPD3-205ENST00000563455 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
SMPD3-205ENST00000563455 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
SMPD3-205ENST00000563455 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
SMPD3-205ENST00000563455 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
SMPD3-205ENST00000563455 DEPDC5O75140 1603 aa19.68■□□□□ 0.74
SMPD3-205ENST00000563455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMPD3-205ENST00000563455 FOXD1Q16676 465 aa19.66■□□□□ 0.74
SMPD3-205ENST00000563455 CCDC144AA2RUR9 1427 aa19.66■□□□□ 0.74
SMPD3-205ENST00000563455 ABCC3O15438 1527 aa19.65■□□□□ 0.74
SMPD3-205ENST00000563455 CPS1P31327 1500 aa19.65■□□□□ 0.74
SMPD3-205ENST00000563455 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
SMPD3-205ENST00000563455 NPHP4O75161 1426 aaPredicted RBP19.64■□□□□ 0.73
SMPD3-205ENST00000563455 ZC3H13Q5T200 1668 aaKnown RBP19.64■□□□□ 0.73
SMPD3-205ENST00000563455 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
SMPD3-205ENST00000563455 PRDM15P57071 1507 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-205ENST00000563455 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
SMPD3-205ENST00000563455 MED14O60244 1454 aa19.62■□□□□ 0.73
SMPD3-205ENST00000563455 ARHGAP31Q2M1Z3 1444 aa19.62■□□□□ 0.73
SMPD3-205ENST00000563455 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
SMPD3-205ENST00000563455 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
SMPD3-205ENST00000563455 SPATA31D1Q6ZQQ2 1576 aa19.61■□□□□ 0.73
SMPD3-205ENST00000563455 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
SMPD3-205ENST00000563455 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
SMPD3-205ENST00000563455 TXNDC2Q86VQ3 553 aa19.59■□□□□ 0.73
SMPD3-205ENST00000563455 TET3O43151 1660 aa19.58■□□□□ 0.72
SMPD3-205ENST00000563455 PIP4K2BP78356 416 aa19.57■□□□□ 0.72
SMPD3-205ENST00000563455 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMPD3-205ENST00000563455 NEURL4Q96JN8 1562 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms