RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 RNF17Q9BXT8 1623 aaKnown RBP19.69■□□□□ 0.74
PKM-208ENST00000563275 NCOA1Q15788 1441 aa19.67■□□□□ 0.74
PKM-208ENST00000563275 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
PKM-208ENST00000563275 EIF2AK4Q9P2K8 1649 aaKnown RBP19.66■□□□□ 0.74
PKM-208ENST00000563275 CROCC2H7BZ55 1655 aa19.66■□□□□ 0.74
PKM-208ENST00000563275 PZPP20742 1482 aa19.66■□□□□ 0.74
PKM-208ENST00000563275 ZNF142P52746 1687 aaPredicted RBP19.65■□□□□ 0.74
PKM-208ENST00000563275 DAPK1P53355 1430 aa19.65■□□□□ 0.74
PKM-208ENST00000563275 DNMT1P26358 1616 aaKnown RBP19.65■□□□□ 0.74
PKM-208ENST00000563275 PTPRTO14522 1441 aa19.64■□□□□ 0.73
PKM-208ENST00000563275 DUOX2Q9NRD8 1548 aa19.64■□□□□ 0.73
PKM-208ENST00000563275 MROH1Q8NDA8 1641 aa19.64■□□□□ 0.73
PKM-208ENST00000563275 CEP170BQ9Y4F5 1589 aaPredicted RBP19.62■□□□□ 0.73
PKM-208ENST00000563275 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
PKM-208ENST00000563275 ABCC3O15438 1527 aa19.61■□□□□ 0.73
PKM-208ENST00000563275 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
PKM-208ENST00000563275 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
PKM-208ENST00000563275 WASHC2CQ9Y4E1 1318 aa19.61■□□□□ 0.73
PKM-208ENST00000563275 CAMSAP1Q5T5Y3 1602 aa19.61■□□□□ 0.73
PKM-208ENST00000563275 FBXO41Q8TF61 875 aa19.6■□□□□ 0.73
PKM-208ENST00000563275 ERBINQ96RT1 1412 aa19.59■□□□□ 0.73
PKM-208ENST00000563275 A2ML1A8K2U0 1454 aa19.59■□□□□ 0.73
PKM-208ENST00000563275 FBXO31Q5XUX0 539 aaPredicted RBP19.58■□□□□ 0.72
PKM-208ENST00000563275 ZC3H13Q5T200 1668 aaKnown RBP19.58■□□□□ 0.72
PKM-208ENST00000563275 TNRQ92752 1358 aa19.57■□□□□ 0.72
PKM-208ENST00000563275 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
PKM-208ENST00000563275 ADGRL2O95490 1459 aa19.56■□□□□ 0.72
PKM-208ENST00000563275 CERKQ8TCT0 537 aa19.54■□□□□ 0.72
PKM-208ENST00000563275 RRP7BPQ9NSQ0 103 aa19.54■□□□□ 0.72
PKM-208ENST00000563275 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
PKM-208ENST00000563275 DEPDC5O75140 1603 aa19.53■□□□□ 0.72
PKM-208ENST00000563275 ANKRD30AQ9BXX3 1397 aa19.53■□□□□ 0.72
PKM-208ENST00000563275 NLRP1Q9C000 1473 aa19.52■□□□□ 0.72
PKM-208ENST00000563275 PKD2Q13563 968 aa19.51■□□□□ 0.71
PKM-208ENST00000563275 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
PKM-208ENST00000563275 LTBP4Q8N2S1 1624 aa19.51■□□□□ 0.71
PKM-208ENST00000563275 ARHGAP31Q2M1Z3 1444 aa19.51■□□□□ 0.71
PKM-208ENST00000563275 NCKAP5LQ9HCH0 1330 aa19.5■□□□□ 0.71
PKM-208ENST00000563275 VWDEQ8N2E2 1590 aa19.49■□□□□ 0.71
PKM-208ENST00000563275 CEP152O94986 1710 aa19.48■□□□□ 0.71
PKM-208ENST00000563275 LMTK2Q8IWU2 1503 aa19.47■□□□□ 0.71
PKM-208ENST00000563275 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
PKM-208ENST00000563275 NEURL4Q96JN8 1562 aa19.45■□□□□ 0.7
PKM-208ENST00000563275 FAM50AQ14320 339 aaKnown RBP19.45■□□□□ 0.7
PKM-208ENST00000563275 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
PKM-208ENST00000563275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
PKM-208ENST00000563275 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
PKM-208ENST00000563275 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
PKM-208ENST00000563275 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
PKM-208ENST00000563275 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
PKM-208ENST00000563275 MED14O60244 1454 aa19.4■□□□□ 0.7
PKM-208ENST00000563275 KANK1Q14678 1352 aa19.39■□□□□ 0.69
PKM-208ENST00000563275 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.69
PKM-208ENST00000563275 ZNF335Q9H4Z2 1342 aaPredicted RBP19.38■□□□□ 0.69
PKM-208ENST00000563275 EFCAB6Q5THR3 1501 aa19.37■□□□□ 0.69
PKM-208ENST00000563275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.693e-16■□□□□ 9.7
PKM-208ENST00000563275 NOS1P29475 1434 aa19.35■□□□□ 0.69
PKM-208ENST00000563275 UBR1Q8IWV7 1749 aa19.35■□□□□ 0.69
PKM-208ENST00000563275 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
PKM-208ENST00000563275 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
PKM-208ENST00000563275 SLIT1O75093 1534 aa19.33■□□□□ 0.68
PKM-208ENST00000563275 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.68
PKM-208ENST00000563275 UNC13BO14795 1591 aa19.32■□□□□ 0.68
PKM-208ENST00000563275 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
PKM-208ENST00000563275 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
PKM-208ENST00000563275 SYNMO15061 1565 aa19.32■□□□□ 0.68
PKM-208ENST00000563275 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
PKM-208ENST00000563275 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
PKM-208ENST00000563275 KDM5AP29375 1690 aaKnown RBP19.3■□□□□ 0.68
PKM-208ENST00000563275 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
PKM-208ENST00000563275 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
PKM-208ENST00000563275 TET3O43151 1660 aa19.28■□□□□ 0.68
PKM-208ENST00000563275 IQGAP1P46940 1657 aa19.28■□□□□ 0.68
PKM-208ENST00000563275 CPS1P31327 1500 aa19.27■□□□□ 0.68
PKM-208ENST00000563275 IDI1Q13907 227 aa19.27■□□□□ 0.68
PKM-208ENST00000563275 TMEM2Q9UHN6 1383 aa19.25■□□□□ 0.67
PKM-208ENST00000563275 LTKP29376 864 aa19.25■□□□□ 0.67
PKM-208ENST00000563275 IQGAP3Q86VI3 1631 aa19.24■□□□□ 0.67
PKM-208ENST00000563275 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
PKM-208ENST00000563275 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
PKM-208ENST00000563275 ADGRB3O60242 1522 aa19.22■□□□□ 0.67
PKM-208ENST00000563275 ITGAEP38570 1179 aa19.2■□□□□ 0.66
PKM-208ENST00000563275 TXNDC2Q86VQ3 553 aa19.2■□□□□ 0.66
PKM-208ENST00000563275 E9PCH4 1651 aa19.18■□□□□ 0.66
PKM-208ENST00000563275 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
PKM-208ENST00000563275 NUP155O75694 1391 aa19.17■□□□□ 0.66
PKM-208ENST00000563275 NAIPQ13075 1403 aa19.17■□□□□ 0.66
PKM-208ENST00000563275 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
PKM-208ENST00000563275 ZFYVE9O95405 1425 aa19.16■□□□□ 0.66
PKM-208ENST00000563275 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
PKM-208ENST00000563275 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.66
PKM-208ENST00000563275 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
PKM-208ENST00000563275 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
PKM-208ENST00000563275 ALKQ9UM73 1620 aa19.13■□□□□ 0.65
PKM-208ENST00000563275 HFM1A2PYH4 1435 aa19.11■□□□□ 0.65
PKM-208ENST00000563275 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
PKM-208ENST00000563275 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
PKM-208ENST00000563275 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
PKM-208ENST00000563275 TOM1O60784 492 aa19.05■□□□□ 0.64
PKM-208ENST00000563275 NWD1Q149M9 1564 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms