RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 NAP1L2Q9ULW6 460 aaPredicted RBP6.58□□□□□ -1.36
SMG1-207ENST00000563235 TESPA1A2RU30 521 aaPredicted RBP6.58□□□□□ -1.36
SMG1-207ENST00000563235 OS9Q13438 667 aaPredicted RBP6.58□□□□□ -1.36
SMG1-207ENST00000563235 CARNS1A5YM72 827 aa6.57□□□□□ -1.36
SMG1-207ENST00000563235 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
SMG1-207ENST00000563235 AK7Q96M32 723 aa6.57□□□□□ -1.36
SMG1-207ENST00000563235 TPD52L2O43399 206 aaKnown RBP6.57□□□□□ -1.36
SMG1-207ENST00000563235 FNBP4Q8N3X1 1017 aaPredicted RBP6.57□□□□□ -1.36
SMG1-207ENST00000563235 MICAL1Q8TDZ2 1067 aa6.56□□□□□ -1.36
SMG1-207ENST00000563235 MYH16Q9H6N6 1097 aa6.56□□□□□ -1.36
SMG1-207ENST00000563235 PDE4DQ08499 809 aa6.56□□□□□ -1.36
SMG1-207ENST00000563235 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
SMG1-207ENST00000563235 HIRIP3Q9BW71 556 aaPredicted RBP6.56□□□□□ -1.36
SMG1-207ENST00000563235 MCCP23508 829 aa6.56□□□□□ -1.36
SMG1-207ENST00000563235 PROSER2Q86WR7 435 aaPredicted RBP6.56□□□□□ -1.36
SMG1-207ENST00000563235 EVI5LQ96CN4 794 aa6.56□□□□□ -1.36
SMG1-207ENST00000563235 RIOK3O14730 519 aaKnown RBP6.55□□□□□ -1.36
SMG1-207ENST00000563235 FOSBP53539 338 aa6.55□□□□□ -1.36
SMG1-207ENST00000563235 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
SMG1-207ENST00000563235 APBB1IPQ7Z5R6 666 aaPredicted RBP6.54□□□□□ -1.36
SMG1-207ENST00000563235 RAB11FIP3O75154 756 aa6.54□□□□□ -1.36
SMG1-207ENST00000563235 MCM6Q14566 821 aa6.54□□□□□ -1.36
SMG1-207ENST00000563235 TRIM66O15016 1216 aa6.53□□□□□ -1.36
SMG1-207ENST00000563235 HAX1O00165 279 aa6.53□□□□□ -1.36
SMG1-207ENST00000563235 DRC1Q96MC2 740 aa6.53□□□□□ -1.36
SMG1-207ENST00000563235 PLSCR2Q9NRY7 297 aa6.53□□□□□ -1.36
SMG1-207ENST00000563235 SPDYE1Q8NFV5 336 aaPredicted RBP6.52□□□□□ -1.37
SMG1-207ENST00000563235 PPP1R1BQ9UD71 204 aaPredicted RBP6.52□□□□□ -1.37
SMG1-207ENST00000563235 DEKP35659 375 aaKnown RBP6.52□□□□□ -1.37
SMG1-207ENST00000563235 MRRFQ96E11 262 aaKnown RBP6.52□□□□□ -1.37
SMG1-207ENST00000563235 SALL2Q9Y467 1007 aaPredicted RBP6.52□□□□□ -1.37
SMG1-207ENST00000563235 PEX14O75381 377 aa6.51□□□□□ -1.37
SMG1-207ENST00000563235 GORABQ5T7V8 394 aa6.5□□□□□ -1.37
SMG1-207ENST00000563235 NME8Q8N427 588 aa6.5□□□□□ -1.37
SMG1-207ENST00000563235 TERF2IPQ9NYB0 399 aa6.5□□□□□ -1.37
SMG1-207ENST00000563235 SSUH2Q9Y2M2 353 aa6.5□□□□□ -1.37
SMG1-207ENST00000563235 IVNS1ABPQ9Y6Y0 642 aa6.5□□□□□ -1.37
SMG1-207ENST00000563235 STK24Q9Y6E0 443 aa6.5□□□□□ -1.37
SMG1-207ENST00000563235 SND1Q7KZF4 910 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMG1-207ENST00000563235 SREK1Q8WXA9 508 aaKnown RBP6.49□□□□□ -1.37
SMG1-207ENST00000563235 RBM47A0AV96 593 aaKnown RBP6.49□□□□□ -1.37
SMG1-207ENST00000563235 MAP4K4O95819 1239 aaPredicted RBP6.49□□□□□ -1.37
SMG1-207ENST00000563235 SKIV2LQ15477 1246 aaKnown RBP6.49□□□□□ -1.37
SMG1-207ENST00000563235 ANP32EQ9BTT0 268 aa6.48□□□□□ -1.37
SMG1-207ENST00000563235 KCNA1Q09470 495 aa6.48□□□□□ -1.37
SMG1-207ENST00000563235 TXNDC2Q86VQ3 553 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 IPO4Q8TEX9 1081 aaKnown RBP6.47□□□□□ -1.37
SMG1-207ENST00000563235 VTI1AQ96AJ9 217 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 KLHL42Q9P2K6 505 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 ERCC6Q03468 1493 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 STK25O00506 426 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 RALBP1Q15311 655 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 KRI1Q8N9T8 703 aaKnown RBP6.47□□□□□ -1.37
SMG1-207ENST00000563235 ARHGEF1Q92888 912 aaKnown RBP6.47□□□□□ -1.37
SMG1-207ENST00000563235 GPATCH3Q96I76 525 aa6.47□□□□□ -1.37
SMG1-207ENST00000563235 CDCA7Q9BWT1 371 aaPredicted RBP6.46□□□□□ -1.38
SMG1-207ENST00000563235 CHMP4BQ9H444 224 aaKnown RBP6.46□□□□□ -1.38
SMG1-207ENST00000563235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.46□□□□□ -1.382e-8■■■■□ 20
SMG1-207ENST00000563235 FOXD4Q12950 439 aaPredicted RBP6.46□□□□□ -1.38
SMG1-207ENST00000563235 RBM26Q5T8P6 1007 aaKnown RBP6.46□□□□□ -1.38
SMG1-207ENST00000563235 PPFIA4O75335 1185 aa6.45□□□□□ -1.38
SMG1-207ENST00000563235 PTMAP06454 111 aaKnown RBP6.45□□□□□ -1.38
SMG1-207ENST00000563235 RPS6KL1Q9Y6S9 549 aa6.45□□□□□ -1.38
SMG1-207ENST00000563235 C19orf67A6NJJ6 358 aa6.44□□□□□ -1.38
SMG1-207ENST00000563235 TCF3P15923 654 aa6.44□□□□□ -1.38
SMG1-207ENST00000563235 PRKAR2AP13861 404 aaKnown RBP6.44□□□□□ -1.38
SMG1-207ENST00000563235 NEFMP07197 916 aa6.43□□□□□ -1.38
SMG1-207ENST00000563235 FTSJ3Q8IY81 847 aaKnown RBP6.43□□□□□ -1.38
SMG1-207ENST00000563235 PLCD3Q8N3E9 789 aa6.43□□□□□ -1.38
SMG1-207ENST00000563235 FAM193AP78312 1265 aa6.42□□□□□ -1.38
SMG1-207ENST00000563235 PARNO95453 639 aaKnown RBP6.42□□□□□ -1.38
SMG1-207ENST00000563235 THOC2Q8NI27 1593 aaKnown RBP6.42□□□□□ -1.38
SMG1-207ENST00000563235 RBM46Q8TBY0 533 aaKnown RBP6.41□□□□□ -1.38
SMG1-207ENST00000563235 PATL2C9JE40 543 aaKnown RBP6.41□□□□□ -1.38
SMG1-207ENST00000563235 UBXN4Q92575 508 aa6.41□□□□□ -1.38
SMG1-207ENST00000563235 PAX3P23760 479 aa6.4□□□□□ -1.38
SMG1-207ENST00000563235 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.38
SMG1-207ENST00000563235 PPP1R15AO75807 674 aaPredicted RBP6.4□□□□□ -1.39
SMG1-207ENST00000563235 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.4□□□□□ -1.39
SMG1-207ENST00000563235 EVX2Q03828 476 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 PNMA2Q9UL42 364 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 CLEC11AQ9Y240 323 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 ZNF16P17020 682 aaPredicted RBP6.39□□□□□ -1.39
SMG1-207ENST00000563235 CDCA8Q53HL2 280 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 DDRGK1Q96HY6 314 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
SMG1-207ENST00000563235 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
SMG1-207ENST00000563235 DPH6Q7L8W6 267 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 MORC4Q8TE76 937 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 PMM1Q92871 262 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
SMG1-207ENST00000563235 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
SMG1-207ENST00000563235 SBNO2Q9Y2G9 1366 aa6.38□□□□□ -1.39
SMG1-207ENST00000563235 ACIN1Q9UKV3 1341 aaKnown RBP6.38□□□□□ -1.39
SMG1-207ENST00000563235 CREB3O43889 395 aa6.37□□□□□ -1.39
SMG1-207ENST00000563235 CLCN6P51797 869 aa6.37□□□□□ -1.39
SMG1-207ENST00000563235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.37□□□□□ -1.39
SMG1-207ENST00000563235 LONRF3Q496Y0 759 aa6.37□□□□□ -1.39
SMG1-207ENST00000563235 ERICH6BQ5W0A0 696 aa6.37□□□□□ -1.39
SMG1-207ENST00000563235 ILDR1Q86SU0 546 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms