RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 C11orf95C9JLR9 678 aaPredicted RBP29.67■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 KDM5CP41229 1560 aa29.67■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 ATP10AO60312 1499 aa29.67■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 NPM1P06748 294 aaKnown RBP eCLIP29.65■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 KIF7Q2M1P5 1343 aa29.65■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 ARID4BQ4LE39 1312 aaPredicted RBP29.64■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 PLA2R1Q13018 1463 aa29.64■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 DCAF11Q8TEB1 546 aa29.62■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 INO80Q9ULG1 1556 aaPredicted RBP29.62■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 AFAP1Q8N556 730 aa29.61■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 ADGRL1O94910 1474 aa29.61■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 ATP7AQ04656 1500 aa29.6■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 CARD11Q9BXL7 1154 aa29.58■■■□□ 2.33
VPS9D1-AS1-202ENST00000562866 KDM2AQ9Y2K7 1162 aa29.57■■■□□ 2.32
VPS9D1-AS1-202ENST00000562866 SCAPERQ9BY12 1400 aa29.56■■■□□ 2.32
VPS9D1-AS1-202ENST00000562866 DEPDC5O75140 1603 aa29.55■■■□□ 2.32
VPS9D1-AS1-202ENST00000562866 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
VPS9D1-AS1-202ENST00000562866 BCORL1Q5H9F3 1711 aa29.52■■■□□ 2.32
VPS9D1-AS1-202ENST00000562866 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
VPS9D1-AS1-202ENST00000562866 EIF2AK4Q9P2K8 1649 aaKnown RBP29.51■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 ROCK2O75116 1388 aaKnown RBP29.5■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 A2MP01023 1474 aa29.5■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 TRPM1Q7Z4N2 1603 aa29.5■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 KANK1Q14678 1352 aa29.49■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 PRKRIP1Q9H875 184 aaPredicted RBP29.49■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 DHX29Q7Z478 1369 aaKnown RBP29.46■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 E9PCH4 1651 aa29.46■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 TET3O43151 1660 aa29.45■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 LAMC1P11047 1609 aa29.45■■■□□ 2.31
VPS9D1-AS1-202ENST00000562866 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 VWDEQ8N2E2 1590 aa29.44■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 TRPM2O94759 1503 aa29.44■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 GPRASP1Q5JY77 1395 aa29.43■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 MYT1LQ9UL68 1186 aa29.43■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 CD109Q6YHK3 1445 aa29.42■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 PTPRTO14522 1441 aa29.4■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 PRDM15P57071 1507 aaPredicted RBP29.39■■■□□ 2.3
VPS9D1-AS1-202ENST00000562866 SPHKAPQ2M3C7 1700 aa29.39■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 ST20-MTHFSA0A0A6YYL1 179 aa29.38■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 STAC3Q96MF2 364 aa29.36■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 KIDINS220Q9ULH0 1771 aa29.36■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 KIF3BO15066 747 aa29.36■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 POLR3GLQ9BT43 218 aa29.34■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 CEP152O94986 1710 aa29.34■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 SUPT16HQ9Y5B9 1047 aaKnown RBP29.34■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 POGZQ7Z3K3 1410 aa29.33■■■□□ 2.29
VPS9D1-AS1-202ENST00000562866 MROH1Q8NDA8 1641 aa29.32■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 MLH3Q9UHC1 1453 aa29.29■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 MRS2Q9HD23 443 aa29.29■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 NEURL4Q96JN8 1562 aa29.29■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 HNRNPUQ00839 825 aaKnown RBP eCLIP29.29■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 CLTCL1P53675 1640 aa29.28■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 NEO1Q92859 1461 aa29.28■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 NBPF1Q3BBV0 1214 aa29.27■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 RNF17Q9BXT8 1623 aaKnown RBP29.27■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 PELP1Q8IZL8 1130 aaKnown RBP29.26■■■□□ 2.28
VPS9D1-AS1-202ENST00000562866 LMTK2Q8IWU2 1503 aa29.25■■■□□ 2.27
VPS9D1-AS1-202ENST00000562866 HECW2Q9P2P5 1572 aa29.25■■■□□ 2.27
VPS9D1-AS1-202ENST00000562866 EFCAB6Q5THR3 1501 aa29.24■■■□□ 2.27
VPS9D1-AS1-202ENST00000562866 MADDQ8WXG6 1647 aa29.24■■■□□ 2.27
VPS9D1-AS1-202ENST00000562866 CCDC184Q52MB2 194 aa29.24■■■□□ 2.27
VPS9D1-AS1-202ENST00000562866 KTN1Q86UP2 1357 aaKnown RBP29.22■■■□□ 2.27
VPS9D1-AS1-202ENST00000562866 COL17A1Q9UMD9 1497 aaPredicted RBP29.19■■■□□ 2.26
VPS9D1-AS1-202ENST00000562866 NEFLP07196 543 aa29.17■■■□□ 2.26
VPS9D1-AS1-202ENST00000562866 FAM9BQ8IZU0 186 aa29.15■■■□□ 2.26
VPS9D1-AS1-202ENST00000562866 PPRC1Q5VV67 1664 aaKnown RBP29.15■■■□□ 2.26
VPS9D1-AS1-202ENST00000562866 FRMPD1Q5SYB0 1578 aa29.14■■■□□ 2.26
VPS9D1-AS1-202ENST00000562866 TESK2Q96S53 571 aa29.13■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 TMF1P82094 1093 aa29.11■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 RALBP1Q15311 655 aa29.11■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 KIAA1210Q9ULL0 1709 aa29.11■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 IQGAP1P46940 1657 aa29.1■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 ABCA6Q8N139 1617 aa29.1■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 MAP3K4Q9Y6R4 1608 aa29.1■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 GLI2P10070 1586 aa29.1■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 KIF1BO60333 1816 aa29.1■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 MYOM2P54296 1465 aa29.09■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 ZBED9Q6R2W3 1325 aa29.08■■■□□ 2.25
VPS9D1-AS1-202ENST00000562866 FKBP8Q14318 412 aa29.07■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 SCAF11Q99590 1463 aaKnown RBP29.06■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 DISP3Q9P2K9 1392 aa29.05■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 MYBBP1AQ9BQG0 1328 aaKnown RBP29.04■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 WASHC2CQ9Y4E1 1318 aa29.04■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 BRD4O60885 1362 aaPredicted RBP29.03■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 UGGT1Q9NYU2 1555 aa29.02■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 EIF3AQ14152 1382 aaKnown RBP29.02■■■□□ 2.24
VPS9D1-AS1-202ENST00000562866 DIP2CQ9Y2E4 1556 aa29.01■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 RICTORQ6R327 1708 aa29.01■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 CYB5RLQ6IPT4 315 aa29.01■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 ABCC3O15438 1527 aa29■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 TMC1Q8TDI8 760 aa29■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 RIMBP3CA6NJZ7 1639 aa29■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 RIMBP3BA6NNM3 1639 aa29■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 RIMBP3Q9UFD9 1639 aa29■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 IFT172Q9UG01 1749 aa28.99■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 RAPGEF3O95398 923 aa28.99■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 CNGB1Q14028 1251 aaPredicted RBP28.99■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 CDCA8Q53HL2 280 aa28.99■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 NPATQ14207 1427 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms